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The map label for this gene is rsmH [H]

Identifier: 238026124

GI number: 238026124

Start: 478320

End: 479261

Strand: Direct

Name: rsmH [H]

Synonym: bglu_1g04540

Alternate gene names: 238026124

Gene position: 478320-479261 (Clockwise)

Preceding gene: 238026123

Following gene: 238026125

Centisome position: 12.24

GC content: 65.61

Gene sequence:

>942_bases
ATGGGAACCGAATTTCAGCACCGCACGGTGCTGCTCGACGAAGCGGTCGACGCGCTCGTGACGCGGCCCGACGGCGTCTA
TGTCGACGGCACATTCGGTCGCGGCGGCCACAGCCGCGCGGTGCTCGCACGGCTGGCCGAAGGCGGCCGGCTGATCGCGT
TCGACAAGGATCCGCTCGCGATCGCGACGGCGCAGCAGATCGCCGATCCGCGCTTCTCGATCGTGCATGACAGTTTTGCG
TCGCTGGGTGGCGCCCTGGCCGAACGCGGCGTGGCGCGGGTGACGGGGGTGCTGCTGGATCTGGGCGTGTCCTCGCCGCA
GATCGACGATCCCGAGCGTGGTTTCAGTTTTCGCGCGAACGGCCCGCTCGACATGCGGATGGACACGACACGCGGCGAAT
CGGCGGCCGACTGGCTCGCCCGTGCGTCGCTGCAGGAACTGACGGAGGTGATACGCGATTATGGGGAAGAACGGTTTGCT
TTTCAGATTGCAAAGGCGCTTGTTGCTCGCCGGGAAGAATCCGATCGTCTCGGGCCCCTCGACAGCACGGGCGAGCTTGC
CCAAATCGTGGGTCACGCCGTCAAGACACGTGAGAAGGGCAAGGATCCGGCAACCCGCACCTTTCAGGCTATACGGATTC
ACGTCAATCAAGAGCTTGCGGACCTGCAGGTCGTTCTAGGGGCTGCATTGTCGTCGTTGGAGCAAGGGGGGCGGCTGGTC
GTGATCAGCTTTCATTCGCTCGAGGATCGAATCGTCAAGCGGTTCCTGCAGACGCACGCCAGTGCGCCGGCGGTCGATCG
CCGCCTGCCGATCCGTGCCGTCGATCTGCCGTCGCCGCCGCTCAAGCTGCTCGGACGCAAATTCCCGAGCGATGCCGAAG
TCGACGCCAATCCGCGTGCCCGGTCCGCCGTGATGCGCATCGCGGAGCGCGTCGCGCCATGA

Upstream 100 bases:

>100_bases
CGCAGACCTACACCGCGAAGGAACAGGCAGCGATGGCGCAGGGCATGCCCGATGCGCTGAAGAACTTCACGTTCTGATTG
CGGTGACGGAGACGCCCGCG

Downstream 100 bases:

>100_bases
ACCGCCTCAACATCTTCCTGCTGATCGTCGTCATGGGTTGTGCCTTGTCGGTCGTCAATTCGACCAATCAGCAGCGGCAG
ATCTTCTTCCAGTTGCAGCG

Product: 16S rRNA m(4)C1402 methyltranserfase

Products: NA

Alternate protein names: 16S rRNA m(4)C1402 methyltransferase; rRNA (cytosine-N(4)-)-methyltransferase RsmH [H]

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MGTEFQHRTVLLDEAVDALVTRPDGVYVDGTFGRGGHSRAVLARLAEGGRLIAFDKDPLAIATAQQIADPRFSIVHDSFA
SLGGALAERGVARVTGVLLDLGVSSPQIDDPERGFSFRANGPLDMRMDTTRGESAADWLARASLQELTEVIRDYGEERFA
FQIAKALVARREESDRLGPLDSTGELAQIVGHAVKTREKGKDPATRTFQAIRIHVNQELADLQVVLGAALSSLEQGGRLV
VISFHSLEDRIVKRFLQTHASAPAVDRRLPIRAVDLPSPPLKLLGRKFPSDAEVDANPRARSAVMRIAERVAP

Sequences:

>Translated_313_residues
MGTEFQHRTVLLDEAVDALVTRPDGVYVDGTFGRGGHSRAVLARLAEGGRLIAFDKDPLAIATAQQIADPRFSIVHDSFA
SLGGALAERGVARVTGVLLDLGVSSPQIDDPERGFSFRANGPLDMRMDTTRGESAADWLARASLQELTEVIRDYGEERFA
FQIAKALVARREESDRLGPLDSTGELAQIVGHAVKTREKGKDPATRTFQAIRIHVNQELADLQVVLGAALSSLEQGGRLV
VISFHSLEDRIVKRFLQTHASAPAVDRRLPIRAVDLPSPPLKLLGRKFPSDAEVDANPRARSAVMRIAERVAP
>Mature_312_residues
GTEFQHRTVLLDEAVDALVTRPDGVYVDGTFGRGGHSRAVLARLAEGGRLIAFDKDPLAIATAQQIADPRFSIVHDSFAS
LGGALAERGVARVTGVLLDLGVSSPQIDDPERGFSFRANGPLDMRMDTTRGESAADWLARASLQELTEVIRDYGEERFAF
QIAKALVARREESDRLGPLDSTGELAQIVGHAVKTREKGKDPATRTFQAIRIHVNQELADLQVVLGAALSSLEQGGRLVV
ISFHSLEDRIVKRFLQTHASAPAVDRRLPIRAVDLPSPPLKLLGRKFPSDAEVDANPRARSAVMRIAERVAP

Specific function: Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA [H]

COG id: COG0275

COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmH family [H]

Homologues:

Organism=Homo sapiens, GI165377209, Length=338, Percent_Identity=38.7573964497041, Blast_Score=182, Evalue=2e-46,
Organism=Homo sapiens, GI165377202, Length=198, Percent_Identity=38.8888888888889, Blast_Score=119, Evalue=3e-27,
Organism=Escherichia coli, GI1786270, Length=315, Percent_Identity=54.6031746031746, Blast_Score=335, Evalue=2e-93,
Organism=Drosophila melanogaster, GI62472493, Length=331, Percent_Identity=38.0664652567976, Blast_Score=171, Evalue=6e-43,
Organism=Drosophila melanogaster, GI28571637, Length=331, Percent_Identity=38.0664652567976, Blast_Score=171, Evalue=6e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002903 [H]

Pfam domain/function: PF01795 Methyltransf_5 [H]

EC number: NA

Molecular weight: Translated: 33993; Mature: 33862

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTEFQHRTVLLDEAVDALVTRPDGVYVDGTFGRGGHSRAVLARLAEGGRLIAFDKDPLA
CCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCH
IATAQQIADPRFSIVHDSFASLGGALAERGVARVTGVLLDLGVSSPQIDDPERGFSFRAN
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECC
GPLDMRMDTTRGESAADWLARASLQELTEVIRDYGEERFAFQIAKALVARREESDRLGPL
CCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCC
DSTGELAQIVGHAVKTREKGKDPATRTFQAIRIHVNQELADLQVVLGAALSSLEQGGRLV
CCCHHHHHHHHHHHHHHHCCCCHHHHHEEHHEEECCHHHHHHHHHHHHHHHHHHCCCCEE
VISFHSLEDRIVKRFLQTHASAPAVDRRLPIRAVDLPSPPLKLLGRKFPSDAEVDANPRA
EEEECCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHCCCCCCCCCCCCCCHH
RSAVMRIAERVAP
HHHHHHHHHHHCC
>Mature Secondary Structure 
GTEFQHRTVLLDEAVDALVTRPDGVYVDGTFGRGGHSRAVLARLAEGGRLIAFDKDPLA
CCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCH
IATAQQIADPRFSIVHDSFASLGGALAERGVARVTGVLLDLGVSSPQIDDPERGFSFRAN
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECC
GPLDMRMDTTRGESAADWLARASLQELTEVIRDYGEERFAFQIAKALVARREESDRLGPL
CCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCC
DSTGELAQIVGHAVKTREKGKDPATRTFQAIRIHVNQELADLQVVLGAALSSLEQGGRLV
CCCHHHHHHHHHHHHHHHCCCCHHHHHEEHHEEECCHHHHHHHHHHHHHHHHHHCCCCEE
VISFHSLEDRIVKRFLQTHASAPAVDRRLPIRAVDLPSPPLKLLGRKFPSDAEVDANPRA
EEEECCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHCCCCCCCCCCCCCCHH
RSAVMRIAERVAP
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA