| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is apaG [H]
Identifier: 238026114
GI number: 238026114
Start: 461714
End: 462088
Strand: Direct
Name: apaG [H]
Synonym: bglu_1g04430
Alternate gene names: 238026114
Gene position: 461714-462088 (Clockwise)
Preceding gene: 238026104
Following gene: 238026115
Centisome position: 11.82
GC content: 63.73
Gene sequence:
>375_bases ATGAGCCAGTACGAATTCAGCGTGTCGGTGAAAACAGCTTATCTGCCGGAACAATCCGACCCGGAGCGGCGTCAATATGC ATTCGCCTACACGCTGACGATTCGCAATACCGGCCAGGTGGCGGCGCAGCTGATCGCGCGGCACTGGGTGATCACCGACA GCGAACAGCAGGTGCAGGAAGTGAAGGGACTCGGCGTGGTCGGCCATCAGCCGCTCCTGAAGCCGGGCGAGCAATTTGAA TACACGAGCTGGGCGGTGATCGCGACGCCGGTGGGCAGCATGCGCGGCGCTTACTTCTGCGTGGCCGAGGACGGCGAGCG CTTCGACGCGCCGGTCGCCGAATTCGCGCTGCACATGCCGCGCACGCTGCACTGA
Upstream 100 bases:
>100_bases GCGCTGGCGGCATCAAGCAGAATGCCGACCAGAGCGGGCCGCCGGGCGGGCCGTGCGGCGTCCCGCCGGGGCGCCGGTCG ACCTTCGAAGCAGGAACCCC
Downstream 100 bases:
>100_bases GGGCGCGGGGCCTTAGCTTCGGTTGCGCGGATCGTCGGCTTGCTGCCGGCGCTGCTGTTTCTTGCCGGACGCGGTCCAGG CGACGATGAAAATCAGCAGG
Product: ApaG protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MSQYEFSVSVKTAYLPEQSDPERRQYAFAYTLTIRNTGQVAAQLIARHWVITDSEQQVQEVKGLGVVGHQPLLKPGEQFE YTSWAVIATPVGSMRGAYFCVAEDGERFDAPVAEFALHMPRTLH
Sequences:
>Translated_124_residues MSQYEFSVSVKTAYLPEQSDPERRQYAFAYTLTIRNTGQVAAQLIARHWVITDSEQQVQEVKGLGVVGHQPLLKPGEQFE YTSWAVIATPVGSMRGAYFCVAEDGERFDAPVAEFALHMPRTLH >Mature_123_residues SQYEFSVSVKTAYLPEQSDPERRQYAFAYTLTIRNTGQVAAQLIARHWVITDSEQQVQEVKGLGVVGHQPLLKPGEQFEY TSWAVIATPVGSMRGAYFCVAEDGERFDAPVAEFALHMPRTLH
Specific function: Unknown
COG id: COG2967
COG function: function code P; Uncharacterized protein affecting Mg2+/Co2+ transport
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 apaG domain [H]
Homologues:
Organism=Homo sapiens, GI15812186, Length=123, Percent_Identity=35.7723577235772, Blast_Score=67, Evalue=5e-12, Organism=Homo sapiens, GI15812188, Length=123, Percent_Identity=35.7723577235772, Blast_Score=67, Evalue=5e-12, Organism=Escherichia coli, GI1786235, Length=117, Percent_Identity=44.4444444444444, Blast_Score=116, Evalue=5e-28, Organism=Drosophila melanogaster, GI21356905, Length=111, Percent_Identity=32.4324324324324, Blast_Score=67, Evalue=2e-12, Organism=Drosophila melanogaster, GI24644238, Length=111, Percent_Identity=32.4324324324324, Blast_Score=67, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007474 - InterPro: IPR023065 [H]
Pfam domain/function: PF04379 DUF525 [H]
EC number: NA
Molecular weight: Translated: 13949; Mature: 13818
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: PS51087 APAG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQYEFSVSVKTAYLPEQSDPERRQYAFAYTLTIRNTGQVAAQLIARHWVITDSEQQVQE CCCEEEEEEEEEEECCCCCCCCHHEEEEEEEEEECCCHHHHHHHHHHHCEEECCHHHHHH VKGLGVVGHQPLLKPGEQFEYTSWAVIATPVGSMRGAYFCVAEDGERFDAPVAEFALHMP HHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCHHHHHHCCC RTLH CCCC >Mature Secondary Structure SQYEFSVSVKTAYLPEQSDPERRQYAFAYTLTIRNTGQVAAQLIARHWVITDSEQQVQE CCEEEEEEEEEEECCCCCCCCHHEEEEEEEEEECCCHHHHHHHHHHHCEEECCHHHHHH VKGLGVVGHQPLLKPGEQFEYTSWAVIATPVGSMRGAYFCVAEDGERFDAPVAEFALHMP HHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCHHHHHHCCC RTLH CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]