Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238026103

Identifier: 238026103

GI number: 238026103

Start: 449681

End: 451471

Strand: Direct

Name: 238026103

Synonym: bglu_1g04320

Alternate gene names: NA

Gene position: 449681-451471 (Clockwise)

Preceding gene: 238026102

Following gene: 238026104

Centisome position: 11.51

GC content: 70.46

Gene sequence:

>1791_bases
ATGACCCCGATACGCTATTCGATCGTCCCGAAGGACCCTGCCGCCCACCTGTTCGAGGTCACGCTGACGGTGGCCGAGCC
CGCTGCGGACGGCCAGCGCTTCATGCTGCCGGTGTGGATTCCCGGCAGCTACATGGTGCGCGAGTTCGCGCGCAGCATCG
TCACGCTGCGCGCGTTCAACGAGGCGGGCCGCAAGGTGCGCATCGCGAAGACCGACAAGCACAGCTGGCAGGCCGCGCCG
GTGGCCGGCCCGCTGACGCTGCGCTACGAGGTCTACGCCTGGGACCTGTCGGTGCGCGCCGCGCATCTGGACGACACGGG
CGGCTTCTTCAACGGCACCAGCGTGTTCCTCGCCGTCGAGGGGCAGGAGGCGGCGCCGTGCGTGGTCGCGATCGAGCGGC
CGGCCGGCGATAGCGCGCGCCGCTGGCGCGTGGCCACCGCGCTGCGCGAGGCGCGCGGCACGAAGCGGTACGGCTTCGGC
GACTACCTGGCCGACGACTACGACGAGCTCATCGATCATCCCGTCACGCTCGGCGAGTTCGCGCTGGCGAGCTTCGCGGC
GCACGGCGTGCCGCACGACGTGGTGATCGCGGGGCGGGTGACGCGGCTCGACATCGAGCGGCTCGCGGCAGACCTCAAGC
GCATCTGCGAGGCGCAGATCGCGCTGTTCGAGCCGCGCACGAAGAAGGCGCCGATGGCTCGCTACGTGTTCATGACGCAG
GCCGTCACCGACGGCTACGGCGGTCTCGAGCACCGTGCCTCCACGGCGCTGGTCTGCAACCGCGGCGACCTGCCGGTGAA
GGGCCGGCCGGAGACGACCGACGGCTACCGCACCTATCTCGCCCTCTGCAGCCACGAATACTTCCACACCTGGAACGTCA
AGCGCATCAAGCCGGCCGCGTTCGTGCCCTACGATTTGCGCCAGGAAAGCTACACTTCGCTGCTGTGGCTGTTCGAGGGC
TTCACGTCCTACTACGACGACCTGATGCTGGTGCGCAGCGGCCTGATGAGCCGCGACGAGTATTTCGCCGCGCTCGGGCG
CACCGTGGGCGGCGTGCTGCGCGGTACGGGGCGCCTGAAGCAGAGCGTCGCGGAAAGCTCGTTCGACAGCTGGATCAAGT
ATTACCGCCAGGACGAGAATGCCTCGAACGCGATCGTCAGCTACTACACCAAGGGCTCGCTCGTCGCGCTCGCGTTCGAT
TTGGCGATTCGCGGCGCTACTCGCAACCGCAAGTCGCTCGACGACGTGATGCGTCTGCTGTGGACGCGCTACGGCCGTGA
TTTCTACCACGGCCAGCCGCGCGGCGTGGGCGAGGACGAGGTGGCCGCGCTGATCACCGAGGCCACCGGCGTGGCGCTGG
GCAGGCTGTTCGACGACGCCGTGTCCGGCACGCGCGACCTGCCGCTGGCCGAGCTGCTCGAGCCGTTCGGCGTGATGCTC
TCGCCCGAGGCGGGGCCGAACCCGAAGCCGTCGCTGGGCGCGCGCGTGCGCGGCGGCGCGGATACCACGCTGGCCGTGGT
CTACGAGGGCGGCGCCGCGCACCGCGCGGGCCTGTCGGCCGGCGACGTGCTGATCGCGATCGACGGCCTGCGCGTGACCG
GCGCGAACCTCGACGCGCTGCTCGCGCGCTACCAGCCTGGCGAGCGCGTGCAGGTTCATGCGTTTCGCCGCGACGAACTG
CGTGAGACGACGCTCAGGCTCGACGCGCCGGACGTCGTGCGCTACCGGCTCACGGCCGACACGCGCACCGCCGCGCGGCG
CGGCTGGCAGCAAGGCTGGCTCGGCGGCTAG

Upstream 100 bases:

>100_bases
CCGCGCCCCCACCCCCGTTGCGCAAAGAGGCGCCGCCGTCCCGCAGGCGCCTCTTTCTTTTCGACCCCGCTATCCGAACC
GCTTCTTGCCGATGTCATCG

Downstream 100 bases:

>100_bases
CACGAACGAAATCGTTCCAGCGGCGCGGATTGTTCCGGTGGTGCAACAATCCGTCGCCGGGCGCCGGCTTTTTCCGGTCT
GGACGCATCCGCACAATGGC

Product: PDZ domain-containing protein

Products: NA

Alternate protein names: Peptidase M; Protease; M61 Family Peptidase; M61 Glycyl Aminopeptidase; M61 Family Glycyl Aminopeptidase; Pdz/Dhr/Glgf; Trypsin-Like Serine Protease; Aminopeptidase N Family Protein; Metallopeptidase; Glycyl Aminopeptidase; PDZ Domain-Containing Protein; Protease With C-Terminal PDZ Domain-Containing Protein; PDZ/DHR/GLGFPeptidase M; PDZ Domain Protein; Protease With C-Terminal PDZ Domain; Signaling Protein; M61 Glycyl Aminopeptidase Protein; M61 Glycyl Aminopeptidase Family Protein

Number of amino acids: Translated: 596; Mature: 595

Protein sequence:

>596_residues
MTPIRYSIVPKDPAAHLFEVTLTVAEPAADGQRFMLPVWIPGSYMVREFARSIVTLRAFNEAGRKVRIAKTDKHSWQAAP
VAGPLTLRYEVYAWDLSVRAAHLDDTGGFFNGTSVFLAVEGQEAAPCVVAIERPAGDSARRWRVATALREARGTKRYGFG
DYLADDYDELIDHPVTLGEFALASFAAHGVPHDVVIAGRVTRLDIERLAADLKRICEAQIALFEPRTKKAPMARYVFMTQ
AVTDGYGGLEHRASTALVCNRGDLPVKGRPETTDGYRTYLALCSHEYFHTWNVKRIKPAAFVPYDLRQESYTSLLWLFEG
FTSYYDDLMLVRSGLMSRDEYFAALGRTVGGVLRGTGRLKQSVAESSFDSWIKYYRQDENASNAIVSYYTKGSLVALAFD
LAIRGATRNRKSLDDVMRLLWTRYGRDFYHGQPRGVGEDEVAALITEATGVALGRLFDDAVSGTRDLPLAELLEPFGVML
SPEAGPNPKPSLGARVRGGADTTLAVVYEGGAAHRAGLSAGDVLIAIDGLRVTGANLDALLARYQPGERVQVHAFRRDEL
RETTLRLDAPDVVRYRLTADTRTAARRGWQQGWLGG

Sequences:

>Translated_596_residues
MTPIRYSIVPKDPAAHLFEVTLTVAEPAADGQRFMLPVWIPGSYMVREFARSIVTLRAFNEAGRKVRIAKTDKHSWQAAP
VAGPLTLRYEVYAWDLSVRAAHLDDTGGFFNGTSVFLAVEGQEAAPCVVAIERPAGDSARRWRVATALREARGTKRYGFG
DYLADDYDELIDHPVTLGEFALASFAAHGVPHDVVIAGRVTRLDIERLAADLKRICEAQIALFEPRTKKAPMARYVFMTQ
AVTDGYGGLEHRASTALVCNRGDLPVKGRPETTDGYRTYLALCSHEYFHTWNVKRIKPAAFVPYDLRQESYTSLLWLFEG
FTSYYDDLMLVRSGLMSRDEYFAALGRTVGGVLRGTGRLKQSVAESSFDSWIKYYRQDENASNAIVSYYTKGSLVALAFD
LAIRGATRNRKSLDDVMRLLWTRYGRDFYHGQPRGVGEDEVAALITEATGVALGRLFDDAVSGTRDLPLAELLEPFGVML
SPEAGPNPKPSLGARVRGGADTTLAVVYEGGAAHRAGLSAGDVLIAIDGLRVTGANLDALLARYQPGERVQVHAFRRDEL
RETTLRLDAPDVVRYRLTADTRTAARRGWQQGWLGG
>Mature_595_residues
TPIRYSIVPKDPAAHLFEVTLTVAEPAADGQRFMLPVWIPGSYMVREFARSIVTLRAFNEAGRKVRIAKTDKHSWQAAPV
AGPLTLRYEVYAWDLSVRAAHLDDTGGFFNGTSVFLAVEGQEAAPCVVAIERPAGDSARRWRVATALREARGTKRYGFGD
YLADDYDELIDHPVTLGEFALASFAAHGVPHDVVIAGRVTRLDIERLAADLKRICEAQIALFEPRTKKAPMARYVFMTQA
VTDGYGGLEHRASTALVCNRGDLPVKGRPETTDGYRTYLALCSHEYFHTWNVKRIKPAAFVPYDLRQESYTSLLWLFEGF
TSYYDDLMLVRSGLMSRDEYFAALGRTVGGVLRGTGRLKQSVAESSFDSWIKYYRQDENASNAIVSYYTKGSLVALAFDL
AIRGATRNRKSLDDVMRLLWTRYGRDFYHGQPRGVGEDEVAALITEATGVALGRLFDDAVSGTRDLPLAELLEPFGVMLS
PEAGPNPKPSLGARVRGGADTTLAVVYEGGAAHRAGLSAGDVLIAIDGLRVTGANLDALLARYQPGERVQVHAFRRDELR
ETTLRLDAPDVVRYRLTADTRTAARRGWQQGWLGG

Specific function: Unknown

COG id: COG3975

COG function: function code R; Predicted protease with the C-terminal PDZ domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65869; Mature: 65738

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPIRYSIVPKDPAAHLFEVTLTVAEPAADGQRFMLPVWIPGSYMVREFARSIVTLRAFN
CCCEEEEECCCCCCCEEEEEEEEEECCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHH
EAGRKVRIAKTDKHSWQAAPVAGPLTLRYEVYAWDLSVRAAHLDDTGGFFNGTSVFLAVE
HCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEE
GQEAAPCVVAIERPAGDSARRWRVATALREARGTKRYGFGDYLADDYDELIDHPVTLGEF
CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHCCCCCHHHH
ALASFAAHGVPHDVVIAGRVTRLDIERLAADLKRICEAQIALFEPRTKKAPMARYVFMTQ
HHHHHHHCCCCCEEEEECCEEHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHH
AVTDGYGGLEHRASTALVCNRGDLPVKGRPETTDGYRTYLALCSHEYFHTWNVKRIKPAA
HHHCCCCCCHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCHHEECCCCEECCCE
FVPYDLRQESYTSLLWLFEGFTSYYDDLMLVRSGLMSRDEYFAALGRTVGGVLRGTGRLK
ECCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHH
QSVAESSFDSWIKYYRQDENASNAIVSYYTKGSLVALAFDLAIRGATRNRKSLDDVMRLL
HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEEHHHCCCCCCHHHHHHHHHHH
WTRYGRDFYHGQPRGVGEDEVAALITEATGVALGRLFDDAVSGTRDLPLAELLEPFGVML
HHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCEEE
SPEAGPNPKPSLGARVRGGADTTLAVVYEGGAAHRAGLSAGDVLIAIDGLRVTGANLDAL
CCCCCCCCCCCCCCEECCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECEEEECCCHHHH
LARYQPGERVQVHAFRRDELRETTLRLDAPDVVRYRLTADTRTAARRGWQQGWLGG
HHHCCCCCEEEEEEECHHHHHHHHEECCCCCCEEEEEECCHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TPIRYSIVPKDPAAHLFEVTLTVAEPAADGQRFMLPVWIPGSYMVREFARSIVTLRAFN
CCEEEEECCCCCCCEEEEEEEEEECCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHH
EAGRKVRIAKTDKHSWQAAPVAGPLTLRYEVYAWDLSVRAAHLDDTGGFFNGTSVFLAVE
HCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEE
GQEAAPCVVAIERPAGDSARRWRVATALREARGTKRYGFGDYLADDYDELIDHPVTLGEF
CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHCCCCCHHHH
ALASFAAHGVPHDVVIAGRVTRLDIERLAADLKRICEAQIALFEPRTKKAPMARYVFMTQ
HHHHHHHCCCCCEEEEECCEEHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHH
AVTDGYGGLEHRASTALVCNRGDLPVKGRPETTDGYRTYLALCSHEYFHTWNVKRIKPAA
HHHCCCCCCHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCHHEECCCCEECCCE
FVPYDLRQESYTSLLWLFEGFTSYYDDLMLVRSGLMSRDEYFAALGRTVGGVLRGTGRLK
ECCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHH
QSVAESSFDSWIKYYRQDENASNAIVSYYTKGSLVALAFDLAIRGATRNRKSLDDVMRLL
HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEEHHHCCCCCCHHHHHHHHHHH
WTRYGRDFYHGQPRGVGEDEVAALITEATGVALGRLFDDAVSGTRDLPLAELLEPFGVML
HHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCEEE
SPEAGPNPKPSLGARVRGGADTTLAVVYEGGAAHRAGLSAGDVLIAIDGLRVTGANLDAL
CCCCCCCCCCCCCCEECCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECEEEECCCHHHH
LARYQPGERVQVHAFRRDELRETTLRLDAPDVVRYRLTADTRTAARRGWQQGWLGG
HHHCCCCCEEEEEEECHHHHHHHHEECCCCCCEEEEEECCHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA