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The map label for this gene is 238026063

Identifier: 238026063

GI number: 238026063

Start: 403385

End: 403888

Strand: Direct

Name: 238026063

Synonym: bglu_1g03910

Alternate gene names: NA

Gene position: 403385-403888 (Clockwise)

Preceding gene: 238026062

Following gene: 238026064

Centisome position: 10.33

GC content: 61.31

Gene sequence:

>504_bases
ATGTTAGATATCTATCTCAATTTCGGTAACCCGGCCATCAAGGGCGAGTCGCAGGACAAGGACCACTCGGGCTGGATTGA
ACTCAAGTCATGGGACTGGTCGGTCACGCAGCCGCGCTCGGCCACCTCGTCCACCTCGGGCGGCCACACCGCCGAGCGCT
GCGAACACAGCGACATGGTGTTCACGAAAGAGCTCGACATGGCGAGCCCGCTGCTGTACCAGCACGCATCGGGCGGCACG
ACCTTCGACGAAGTGTCGATCGACTTCATGCGTTCGGACGGCGACGGCAAGCGCGTCAAGTACCTCGAGATCAAGCTCAA
GTACGTGATCATCTCGAGCGTCACGCCGAGCGTGCAGAAGGAAGGCCTGCCGGTCGAGCAGTTCTCGCTGAAGTACGCTG
CGGTGCAGTGGAAGCAGACCAAGCAGAACATCGGCGGCAACCAGGGCGGCAACACCCAGGGCGCCTGGAGCCTCACGAAG
AACGACAAGACCTACGCGGTCTGA

Upstream 100 bases:

>100_bases
TGCCCAAGTCGGCAAATTCATGAGCGTTTGAGTCGAAGTCGCCCGGGCGGGCCGCCCGGGCAAAAATGGGAAAACCACCT
CTTTGGGGAGTCGATGCGTC

Downstream 100 bases:

>100_bases
GCGCGTCGTGACACCCACCGGGCGGGGCACTGGCGGCCCCCGCCCGGCGTTTTGCTTCACCGCTGCCAGCCGCTCCATGA
AACGTTTCGAGCCGAGTTTC

Product: putative type VI secretion system protein TssD

Products: NA

Alternate protein names: Type VI Secretion System Effector Hcp1 Family; Type VI Secretion System Effector Hcp1 Family Protein; Hcp1 Family Type VI Secretion System Effector; Type VI Secretion System Protein; Secretion System Protein Hemolysin-Coregulated Protein

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MLDIYLNFGNPAIKGESQDKDHSGWIELKSWDWSVTQPRSATSSTSGGHTAERCEHSDMVFTKELDMASPLLYQHASGGT
TFDEVSIDFMRSDGDGKRVKYLEIKLKYVIISSVTPSVQKEGLPVEQFSLKYAAVQWKQTKQNIGGNQGGNTQGAWSLTK
NDKTYAV

Sequences:

>Translated_167_residues
MLDIYLNFGNPAIKGESQDKDHSGWIELKSWDWSVTQPRSATSSTSGGHTAERCEHSDMVFTKELDMASPLLYQHASGGT
TFDEVSIDFMRSDGDGKRVKYLEIKLKYVIISSVTPSVQKEGLPVEQFSLKYAAVQWKQTKQNIGGNQGGNTQGAWSLTK
NDKTYAV
>Mature_167_residues
MLDIYLNFGNPAIKGESQDKDHSGWIELKSWDWSVTQPRSATSSTSGGHTAERCEHSDMVFTKELDMASPLLYQHASGGT
TFDEVSIDFMRSDGDGKRVKYLEIKLKYVIISSVTPSVQKEGLPVEQFSLKYAAVQWKQTKQNIGGNQGGNTQGAWSLTK
NDKTYAV

Specific function: Unknown

COG id: COG3157

COG function: function code S; Hemolysin-coregulated protein (uncharacterized)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18557; Mature: 18557

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDIYLNFGNPAIKGESQDKDHSGWIELKSWDWSVTQPRSATSSTSGGHTAERCEHSDMV
CEEEEEECCCCEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCEE
FTKELDMASPLLYQHASGGTTFDEVSIDFMRSDGDGKRVKYLEIKLKYVIISSVTPSVQK
EEECCCCCCCEEEEECCCCCEEHHEEEEEEECCCCCCEEEEEEEEEEEEEEECCCCCHHH
EGLPVEQFSLKYAAVQWKQTKQNIGGNQGGNTQGAWSLTKNDKTYAV
CCCCHHHHEEEEEEEEEHHHHHHCCCCCCCCCCCEEEEECCCCEECC
>Mature Secondary Structure
MLDIYLNFGNPAIKGESQDKDHSGWIELKSWDWSVTQPRSATSSTSGGHTAERCEHSDMV
CEEEEEECCCCEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCEE
FTKELDMASPLLYQHASGGTTFDEVSIDFMRSDGDGKRVKYLEIKLKYVIISSVTPSVQK
EEECCCCCCCEEEEECCCCCEEHHEEEEEEECCCCCCEEEEEEEEEEEEEEECCCCCHHH
EGLPVEQFSLKYAAVQWKQTKQNIGGNQGGNTQGAWSLTKNDKTYAV
CCCCHHHHEEEEEEEEEHHHHHHCCCCCCCCCCCEEEEECCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA