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The map label for this gene is gspD [C]

Identifier: 238026031

GI number: 238026031

Start: 371225

End: 372574

Strand: Reverse

Name: gspD [C]

Synonym: bglu_1g03580

Alternate gene names: 238026031

Gene position: 372574-371225 (Counterclockwise)

Preceding gene: 238026032

Following gene: 238026030

Centisome position: 9.54

GC content: 61.19

Gene sequence:

>1350_bases
ATGAGGCGGCTCGCGGTTGTCCTTTGGTTCTTTGCCGGCGTGAGCTGCGCTGCCGGGTCGCCGGTGCCAGCCTCGATGCC
GGGTCTGCCGCCTCTGCCTTCGGTGGCCGGCCTGTCGACCGGGGCCGGTCAGGCTCCGCTTCCTGCGCCGCCGCTGGTGC
CATTGAAGATCGGCGACGCGAAGTCGGTCGATCTGCGCTTCGTGAATGTCGCGCAGGTGATCGACCTGGTGTACGCGGAC
ATGTTGCAGTCGCAGTACGTAATTTCGCCCGACGTTCTGGCCGACACGCGCTTGGTGTCGTTTCGCTTCGATCGCACCAA
GGGGGACATCCGCGATGTGCTGGGCGATTTTCTGTCGTCACTCGGCTTCGGCGTGACGGCGAGGAACGGCGTCGATTATG
TGTTCAAGCGCAAGGACGATGACCAGAAGGAAGCGGACAAACAGGTGTTCGTCTACTCGCCCAAGTATCGGACGGCAGAC
TACCTCTCGCGTCTGGTGCAGCCGCTGTTTAGCGGACAGTTCACGATGAATCGCGCTGTGCCTGCTGCTGTGGGGTCGCG
GGCCAAGGCCGATGCACCGCCCACGTCAGCTGCGGCGATGGTCGACCAGTCGTCTGACACGATGGTGTTTCTCAGCTCGG
CGAAGGAAATCGCGCTACTGAAGTCGGTGCTGCCGCAGGTGGACACCAAGACGGGTGAAGTGGCGATTCGAGCGTGGGTG
TATGAGGTGTCGACAGAGAACGATCGCACGACGGGCTTCCAGCTCGCAGCGAGCATCTTGGGCGGCAAGCTGGGCGTGTC
GCTGGGTGTCGGAACGGTCGATGAGAGCGCAAACGCGTTGCGATTGCATGCCGGTTTTTTGGACGCTGCAATCGCGGCTC
TCGATTCAGATAGCCGGTTTCATGTCATCACATCGCCGAATCTGCGCGTGGAGTCGGGCAAGCACGGTCGGCTGAACGTC
GGCCAGTCGGTGCCGGTGATCGATTCCGTGACATATCCGAACTCAAGCGCGGCTCCGCTGCAATCGGTAACGTACCAGGA
TGCAGGGGTGATCTTCGACGTGCAGCCGACCGTCAAGGATGACGTGATCGACACTGACGTGACTGTCGAGATTTCCGACT
TTCAAAGGACCAGCACCGGCGTGAACAACTCGCCGACGAAGAACACGCGCAAGGTGGAGACCAGCATGACGCTACGCGAT
GGTGAGGTGGTGGTAATGGGCGGATTGAGCGAAGGCAAGGACTCCATCGTGACTAGCGGTATTCGATGGCTTCCGTCGTT
CATGGACGGGCGAAGCCTGTCGGGTTCGCACTCCGACATTGTGCTGGTGCTGCAGGTCTCGCGAATATGA

Upstream 100 bases:

>100_bases
GCATGATCGATGGCGAGGCCGTAACGACGTTTTCCGGCACGAAGCCGTCGAATTTGGGCACGGGTGGGGCAGTGTCGGGC
GGTCTGGTTGGGGTGGCGAA

Downstream 100 bases:

>100_bases
CTGACGGCTGGACCATGCGGCGCATATCGCAGCAACGAGGCGTTGGGCATGTGTCAAGGCTCGGCGTAGCCGACCGCGTA
GCGGCTTGGCCTTTACACGG

Product: type II secretory pathway, component PulD

Products: NA

Alternate protein names: Type II And III Secretion System Protein; Type II Secretory Pathway Component PulD; Bacteriophage-Related Lipoprotein; Type II/III Secretion System Protein; PulD Family Bacteriophage Secretion Protein

Number of amino acids: Translated: 449; Mature: 449

Protein sequence:

>449_residues
MRRLAVVLWFFAGVSCAAGSPVPASMPGLPPLPSVAGLSTGAGQAPLPAPPLVPLKIGDAKSVDLRFVNVAQVIDLVYAD
MLQSQYVISPDVLADTRLVSFRFDRTKGDIRDVLGDFLSSLGFGVTARNGVDYVFKRKDDDQKEADKQVFVYSPKYRTAD
YLSRLVQPLFSGQFTMNRAVPAAVGSRAKADAPPTSAAAMVDQSSDTMVFLSSAKEIALLKSVLPQVDTKTGEVAIRAWV
YEVSTENDRTTGFQLAASILGGKLGVSLGVGTVDESANALRLHAGFLDAAIAALDSDSRFHVITSPNLRVESGKHGRLNV
GQSVPVIDSVTYPNSSAAPLQSVTYQDAGVIFDVQPTVKDDVIDTDVTVEISDFQRTSTGVNNSPTKNTRKVETSMTLRD
GEVVVMGGLSEGKDSIVTSGIRWLPSFMDGRSLSGSHSDIVLVLQVSRI

Sequences:

>Translated_449_residues
MRRLAVVLWFFAGVSCAAGSPVPASMPGLPPLPSVAGLSTGAGQAPLPAPPLVPLKIGDAKSVDLRFVNVAQVIDLVYAD
MLQSQYVISPDVLADTRLVSFRFDRTKGDIRDVLGDFLSSLGFGVTARNGVDYVFKRKDDDQKEADKQVFVYSPKYRTAD
YLSRLVQPLFSGQFTMNRAVPAAVGSRAKADAPPTSAAAMVDQSSDTMVFLSSAKEIALLKSVLPQVDTKTGEVAIRAWV
YEVSTENDRTTGFQLAASILGGKLGVSLGVGTVDESANALRLHAGFLDAAIAALDSDSRFHVITSPNLRVESGKHGRLNV
GQSVPVIDSVTYPNSSAAPLQSVTYQDAGVIFDVQPTVKDDVIDTDVTVEISDFQRTSTGVNNSPTKNTRKVETSMTLRD
GEVVVMGGLSEGKDSIVTSGIRWLPSFMDGRSLSGSHSDIVLVLQVSRI
>Mature_449_residues
MRRLAVVLWFFAGVSCAAGSPVPASMPGLPPLPSVAGLSTGAGQAPLPAPPLVPLKIGDAKSVDLRFVNVAQVIDLVYAD
MLQSQYVISPDVLADTRLVSFRFDRTKGDIRDVLGDFLSSLGFGVTARNGVDYVFKRKDDDQKEADKQVFVYSPKYRTAD
YLSRLVQPLFSGQFTMNRAVPAAVGSRAKADAPPTSAAAMVDQSSDTMVFLSSAKEIALLKSVLPQVDTKTGEVAIRAWV
YEVSTENDRTTGFQLAASILGGKLGVSLGVGTVDESANALRLHAGFLDAAIAALDSDSRFHVITSPNLRVESGKHGRLNV
GQSVPVIDSVTYPNSSAAPLQSVTYQDAGVIFDVQPTVKDDVIDTDVTVEISDFQRTSTGVNNSPTKNTRKVETSMTLRD
GEVVVMGGLSEGKDSIVTSGIRWLPSFMDGRSLSGSHSDIVLVLQVSRI

Specific function: Involved In A General Secretion Pathway (Gsp) For The Export Of Proteins (By Similarity). [C]

COG id: COG1450

COG function: function code NU; Type II secretory pathway, component PulD

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47858; Mature: 47858

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLAVVLWFFAGVSCAAGSPVPASMPGLPPLPSVAGLSTGAGQAPLPAPPLVPLKIGDA
CCHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
KSVDLRFVNVAQVIDLVYADMLQSQYVISPDVLADTRLVSFRFDRTKGDIRDVLGDFLSS
CCCEEEEEHHHHHHHHHHHHHHHCCEEECCCHHCCCEEEEEEECCCCCHHHHHHHHHHHH
LGFGVTARNGVDYVFKRKDDDQKEADKQVFVYSPKYRTADYLSRLVQPLFSGQFTMNRAV
HCCCEEECCCCCEEEECCCCCHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEECCCC
PAAVGSRAKADAPPTSAAAMVDQSSDTMVFLSSAKEIALLKSVLPQVDTKTGEVAIRAWV
HHHHCCCCCCCCCCCCHHHEEECCCCCEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEEE
YEVSTENDRTTGFQLAASILGGKLGVSLGVGTVDESANALRLHAGFLDAAIAALDSDSRF
EEEECCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEHHHHHHHHHHHCCCCEE
HVITSPNLRVESGKHGRLNVGQSVPVIDSVTYPNSSAAPLQSVTYQDAGVIFDVQPTVKD
EEEECCCEEEECCCCCCEECCCCCCCEEEECCCCCCCCCHHHEEECCCCEEEEECCCCCC
DVIDTDVTVEISDFQRTSTGVNNSPTKNTRKVETSMTLRDGEVVVMGGLSEGKDSIVTSG
CCCCCCEEEEECCCCHHCCCCCCCCCCCCEEEEEEEEEECCCEEEECCCCCCCHHHHHHH
IRWLPSFMDGRSLSGSHSDIVLVLQVSRI
HHHHHHHHCCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MRRLAVVLWFFAGVSCAAGSPVPASMPGLPPLPSVAGLSTGAGQAPLPAPPLVPLKIGDA
CCHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
KSVDLRFVNVAQVIDLVYADMLQSQYVISPDVLADTRLVSFRFDRTKGDIRDVLGDFLSS
CCCEEEEEHHHHHHHHHHHHHHHCCEEECCCHHCCCEEEEEEECCCCCHHHHHHHHHHHH
LGFGVTARNGVDYVFKRKDDDQKEADKQVFVYSPKYRTADYLSRLVQPLFSGQFTMNRAV
HCCCEEECCCCCEEEECCCCCHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEECCCC
PAAVGSRAKADAPPTSAAAMVDQSSDTMVFLSSAKEIALLKSVLPQVDTKTGEVAIRAWV
HHHHCCCCCCCCCCCCHHHEEECCCCCEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEEE
YEVSTENDRTTGFQLAASILGGKLGVSLGVGTVDESANALRLHAGFLDAAIAALDSDSRF
EEEECCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEHHHHHHHHHHHCCCCEE
HVITSPNLRVESGKHGRLNVGQSVPVIDSVTYPNSSAAPLQSVTYQDAGVIFDVQPTVKD
EEEECCCEEEECCCCCCEECCCCCCCEEEECCCCCCCCCHHHEEECCCCEEEEECCCCCC
DVIDTDVTVEISDFQRTSTGVNNSPTKNTRKVETSMTLRDGEVVVMGGLSEGKDSIVTSG
CCCCCCEEEEECCCCHHCCCCCCCCCCCCEEEEEEEEEECCCEEEECCCCCCCHHHHHHH
IRWLPSFMDGRSLSGSHSDIVLVLQVSRI
HHHHHHHHCCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA