| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026029
Identifier: 238026029
GI number: 238026029
Start: 369749
End: 370042
Strand: Reverse
Name: 238026029
Synonym: bglu_1g03560
Alternate gene names: NA
Gene position: 370042-369749 (Counterclockwise)
Preceding gene: 238026030
Following gene: 238026028
Centisome position: 9.47
GC content: 56.12
Gene sequence:
>294_bases TTGACCGGTGTCAGACGTACTGGAACGAGGAGCTTGGGTGTTTTTGGTTATCAACTCGGGAGGCCTAAATTGAGCGACAT GTTCCTGTCTCCCATTGAATTAGTTGTACTAACTGGAAGGAAGATTAAGTCGAAACAAATCGAGGCCCTCCGTCGGATGG GGGTACCGTTCCTTGTCAACGCGTGCGGCCGCGCGGTCGTTGCTCGCTCCGCCATCGACGGACGCTCGAACAGCGCCGGC CGAACCGCATCGGTCGGTCGTGCCATTTGGAATCCAACAGTTTTGGGGCGGTGA
Upstream 100 bases:
>100_bases GAAGTTCCGACACAGCACCCGATCGCTCATCTGATATTCGAGGGGGCGGTTGAAGCAATTAAAACTGCCTTTGAGGCAGC AGGCAGGGTAGGAGCAACAT
Downstream 100 bases:
>100_bases TTCGTGGGACGAAAACCAACCAAGAATCTTCATTTGCCGCCTCGGATGCGGATCAAGCAAACGTCGAGCGGAAAGACGTA CTACTACTACGACATCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 97; Mature: 96
Protein sequence:
>97_residues MTGVRRTGTRSLGVFGYQLGRPKLSDMFLSPIELVVLTGRKIKSKQIEALRRMGVPFLVNACGRAVVARSAIDGRSNSAG RTASVGRAIWNPTVLGR
Sequences:
>Translated_97_residues MTGVRRTGTRSLGVFGYQLGRPKLSDMFLSPIELVVLTGRKIKSKQIEALRRMGVPFLVNACGRAVVARSAIDGRSNSAG RTASVGRAIWNPTVLGR >Mature_96_residues TGVRRTGTRSLGVFGYQLGRPKLSDMFLSPIELVVLTGRKIKSKQIEALRRMGVPFLVNACGRAVVARSAIDGRSNSAGR TASVGRAIWNPTVLGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10456; Mature: 10325
Theoretical pI: Translated: 12.45; Mature: 12.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGVRRTGTRSLGVFGYQLGRPKLSDMFLSPIELVVLTGRKIKSKQIEALRRMGVPFLVN CCCCCCCCCCCCCCEEEECCCCCHHHHHHCHHHEEEECCCCCCHHHHHHHHHCCCCHHHH ACGRAVVARSAIDGRSNSAGRTASVGRAIWNPTVLGR HHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCC >Mature Secondary Structure TGVRRTGTRSLGVFGYQLGRPKLSDMFLSPIELVVLTGRKIKSKQIEALRRMGVPFLVN CCCCCCCCCCCCCEEEECCCCCHHHHHHCHHHEEEECCCCCCHHHHHHHHHCCCCHHHH ACGRAVVARSAIDGRSNSAGRTASVGRAIWNPTVLGR HHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA