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The map label for this gene is petB [H]

Identifier: 238026022

GI number: 238026022

Start: 363340

End: 364722

Strand: Direct

Name: petB [H]

Synonym: bglu_1g03480

Alternate gene names: 238026022

Gene position: 363340-364722 (Clockwise)

Preceding gene: 238026021

Following gene: 238026023

Centisome position: 9.3

GC content: 63.7

Gene sequence:

>1383_bases
ATGGCCACCGACGACAAGACTGTCGCCACGACGGGTTTGATGGGCTGGATCGATGCGCGTTTCCCGTTCACGGTCACGCT
CAAGAAGCACGTGACCGAGTACTACGCGCCGAAGAACTTCAACTTCTGGTACTTCTTCGGCTCGCTCGCGCTGCTGGTGC
TGGTGAACCAGATCGTCACCGGCATCTTCCTGACGATGAACTACAAGCCCGATGCGACGCTCGCGTTCGCGTCGGTCGAG
TACATCATGCGCGAGGTGCCGTGGGGCTGGCTGATCCGCTACATGCACTCGACGGGCGCCTCGATGTTCTTCATCGTGGT
CTACCTGCACATGTTCCGCGGGCTGCTGTACGGCTCGTACCGCAAGCCGCGCGAACTGGTGTGGATCTTCGGCTGCGCGA
TCTTCCTGTGCCTGATGGCCGAGGCGTTCTTCGGCTACCTGCTGCCGTGGGGCCAGATGTCGTTCTGGGGCGCGCAGGTG
ATCGTGAACCTGTTCTCGGCGATTCCGTTCATCGGGCCGGACCTCTCGCTCTGGATCCGTGGCGACTACGTGGTGTCCGA
CGTCACGCTCAACCGCTTCTTCGCGTTCCACGTGATCGCGATTCCGCTGGTGCTGGTGGGGCTGGTGGTTGCGCATCTGA
TCGCGCTGCACGAGACGGGCTCGAACAACCCGGACGGCATCGAGATCAAGGACAAGAAGGACGAGCGCGGCATTCCGCTC
GACGGCATCCCGTTCCACCCCTATTACTCCGTGCATGACTACTTCGGGGTCTGCGTGTTCCTGATGATCTTCGCGCTGGT
GGTGTTCTTCGCGCCGGAGATGGGCGGCTACTTCCTCGAGGCCAACAACTTCGTGCCCGCCAACCCGCTGCAGACGCCGC
CCGAGATCGCGCCGGTGTGGTACTTCACCGCGTTCTACGCGATGCTGCGCGCCACCACCGATCCGTTCAAGATCGTGCTG
ATGGTGGTGATCGCCGTGCTCGGGCTGACCGCGCTCTGGCGCGCCCGCGGCAAGTGGCGGATCGGCCTGCCGGTGCTGGC
CGCCGCGCTGATCGCGTTCATGGCGCTGACCGAATCGAAGTTCTGGGGCGTGGTGGTGATGGGCGGCGCCGTGATCTCGC
TGTTCTTCCTGCCCTGGCTCGACCGCAGCCCGGTGAAATCGATCCGCTACCGTCCCACGTTCCACAAGGTGTTCCTCGGG
ATGTTCGTCGTCGCGTTCCTGACGCTCGGCTTCCTCGGCACCCAGTCGCCGTCGCCTGCCAAGACGCTGATCGCGCAGGT
GTGCGCGCTGGTCTACTTCGCGTTTTTCCTCGGCATGCCGCTCTGGACCCCGCTTGGCACGTTCAAGCAGCCGCCCGAGC
GCGTCAAGTTCCGGCCCCATTAA

Upstream 100 bases:

>100_bases
TCAAGAACAAGCCCGCGCCGCAGAACCTCGACATCCCGCCTTACATGTTCACCTCGGCCACCACGGTCGTGATCGGCAAG
GACGAGAAAGGAGAAGCGTG

Downstream 100 bases:

>100_bases
TGCGAGCGAGGAGAACACGATGATGAGGACGCTATTGAAGACGTTCCTGCTGATCGGTGCGACGTCGCTGGCACTGCTGG
GCGGCACGGCGCGGGCCGGT

Product: cytochrome b/b6

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 459

Protein sequence:

>460_residues
MATDDKTVATTGLMGWIDARFPFTVTLKKHVTEYYAPKNFNFWYFFGSLALLVLVNQIVTGIFLTMNYKPDATLAFASVE
YIMREVPWGWLIRYMHSTGASMFFIVVYLHMFRGLLYGSYRKPRELVWIFGCAIFLCLMAEAFFGYLLPWGQMSFWGAQV
IVNLFSAIPFIGPDLSLWIRGDYVVSDVTLNRFFAFHVIAIPLVLVGLVVAHLIALHETGSNNPDGIEIKDKKDERGIPL
DGIPFHPYYSVHDYFGVCVFLMIFALVVFFAPEMGGYFLEANNFVPANPLQTPPEIAPVWYFTAFYAMLRATTDPFKIVL
MVVIAVLGLTALWRARGKWRIGLPVLAAALIAFMALTESKFWGVVVMGGAVISLFFLPWLDRSPVKSIRYRPTFHKVFLG
MFVVAFLTLGFLGTQSPSPAKTLIAQVCALVYFAFFLGMPLWTPLGTFKQPPERVKFRPH

Sequences:

>Translated_460_residues
MATDDKTVATTGLMGWIDARFPFTVTLKKHVTEYYAPKNFNFWYFFGSLALLVLVNQIVTGIFLTMNYKPDATLAFASVE
YIMREVPWGWLIRYMHSTGASMFFIVVYLHMFRGLLYGSYRKPRELVWIFGCAIFLCLMAEAFFGYLLPWGQMSFWGAQV
IVNLFSAIPFIGPDLSLWIRGDYVVSDVTLNRFFAFHVIAIPLVLVGLVVAHLIALHETGSNNPDGIEIKDKKDERGIPL
DGIPFHPYYSVHDYFGVCVFLMIFALVVFFAPEMGGYFLEANNFVPANPLQTPPEIAPVWYFTAFYAMLRATTDPFKIVL
MVVIAVLGLTALWRARGKWRIGLPVLAAALIAFMALTESKFWGVVVMGGAVISLFFLPWLDRSPVKSIRYRPTFHKVFLG
MFVVAFLTLGFLGTQSPSPAKTLIAQVCALVYFAFFLGMPLWTPLGTFKQPPERVKFRPH
>Mature_459_residues
ATDDKTVATTGLMGWIDARFPFTVTLKKHVTEYYAPKNFNFWYFFGSLALLVLVNQIVTGIFLTMNYKPDATLAFASVEY
IMREVPWGWLIRYMHSTGASMFFIVVYLHMFRGLLYGSYRKPRELVWIFGCAIFLCLMAEAFFGYLLPWGQMSFWGAQVI
VNLFSAIPFIGPDLSLWIRGDYVVSDVTLNRFFAFHVIAIPLVLVGLVVAHLIALHETGSNNPDGIEIKDKKDERGIPLD
GIPFHPYYSVHDYFGVCVFLMIFALVVFFAPEMGGYFLEANNFVPANPLQTPPEIAPVWYFTAFYAMLRATTDPFKIVLM
VVIAVLGLTALWRARGKWRIGLPVLAAALIAFMALTESKFWGVVVMGGAVISLFFLPWLDRSPVKSIRYRPTFHKVFLGM
FVVAFLTLGFLGTQSPSPAKTLIAQVCALVYFAFFLGMPLWTPLGTFKQPPERVKFRPH

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

Organism=Homo sapiens, GI251831119, Length=402, Percent_Identity=39.3034825870647, Blast_Score=256, Evalue=4e-68,
Organism=Saccharomyces cerevisiae, GI6226529, Length=411, Percent_Identity=38.9294403892944, Blast_Score=256, Evalue=7e-69,
Organism=Saccharomyces cerevisiae, GI6226532, Length=241, Percent_Identity=48.1327800829876, Blast_Score=211, Evalue=2e-55,
Organism=Saccharomyces cerevisiae, GI6226531, Length=152, Percent_Identity=52.6315789473684, Blast_Score=153, Evalue=5e-38,
Organism=Saccharomyces cerevisiae, GI6226530, Length=137, Percent_Identity=49.6350364963504, Blast_Score=124, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005798
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00032 Cytochrom_B_C; PF00033 Cytochrom_B_N [H]

EC number: 1.10.2.2

Molecular weight: Translated: 52101; Mature: 51970

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS51002 CYTB_NTER ; PS51003 CYTB_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATDDKTVATTGLMGWIDARFPFTVTLKKHVTEYYAPKNFNFWYFFGSLALLVLVNQIVT
CCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
GIFLTMNYKPDATLAFASVEYIMREVPWGWLIRYMHSTGASMFFIVVYLHMFRGLLYGSY
HEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
RKPRELVWIFGCAIFLCLMAEAFFGYLLPWGQMSFWGAQVIVNLFSAIPFIGPDLSLWIR
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEE
GDYVVSDVTLNRFFAFHVIAIPLVLVGLVVAHLIALHETGSNNPDGIEIKDKKDERGIPL
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCC
DGIPFHPYYSVHDYFGVCVFLMIFALVVFFAPEMGGYFLEANNFVPANPLQTPPEIAPVW
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHH
YFTAFYAMLRATTDPFKIVLMVVIAVLGLTALWRARGKWRIGLPVLAAALIAFMALTESK
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHCCC
FWGVVVMGGAVISLFFLPWLDRSPVKSIRYRPTFHKVFLGMFVVAFLTLGFLGTQSPSPA
CCEEEEHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH
KTLIAQVCALVYFAFFLGMPLWTPLGTFKQPPERVKFRPH
HHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHCCCCCC
>Mature Secondary Structure 
ATDDKTVATTGLMGWIDARFPFTVTLKKHVTEYYAPKNFNFWYFFGSLALLVLVNQIVT
CCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
GIFLTMNYKPDATLAFASVEYIMREVPWGWLIRYMHSTGASMFFIVVYLHMFRGLLYGSY
HEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
RKPRELVWIFGCAIFLCLMAEAFFGYLLPWGQMSFWGAQVIVNLFSAIPFIGPDLSLWIR
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEE
GDYVVSDVTLNRFFAFHVIAIPLVLVGLVVAHLIALHETGSNNPDGIEIKDKKDERGIPL
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCC
DGIPFHPYYSVHDYFGVCVFLMIFALVVFFAPEMGGYFLEANNFVPANPLQTPPEIAPVW
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHH
YFTAFYAMLRATTDPFKIVLMVVIAVLGLTALWRARGKWRIGLPVLAAALIAFMALTESK
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHCCC
FWGVVVMGGAVISLFFLPWLDRSPVKSIRYRPTFHKVFLGMFVVAFLTLGFLGTQSPSPA
CCEEEEHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH
KTLIAQVCALVYFAFFLGMPLWTPLGTFKQPPERVKFRPH
HHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA