| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is tatB [H]
Identifier: 238026017
GI number: 238026017
Start: 358835
End: 359377
Strand: Direct
Name: tatB [H]
Synonym: bglu_1g03430
Alternate gene names: 238026017
Gene position: 358835-359377 (Clockwise)
Preceding gene: 238026016
Following gene: 238026018
Centisome position: 9.19
GC content: 72.56
Gene sequence:
>543_bases ATGCTGGATCTGGGTCTTTCCAAGATGGCGCTGATCGGCGTGGTCGCGCTGGTGGTGCTCGGCCCCGAGCGCCTGCCGCG CGTCGCGCGCACGGCCGGCGCGCTGTTCGGGCGCGCGCAGCGCTACATCAACGACGTCAAGGCGGAAGTCTCGCGCGAGA TCGAGCTCGACGCGCTGCGTACCATGCGCACCGACTTCGAGAGCGCCGCGCGCAACGTCGAGAACACCATTCACGACAAC CTTCGGCAGCACGAAGCGGACCTCAACGACGCCTGGAGTTCGGCCGTCTCGGGCGAGGCCGCGTCGCCGGTCGCGGTGTC GGCCGATGGCGCCGCGGGCGCCGGCTCGATGTCGTGGCAGGGCAGCGGGACCGCGGCCAGCGCCGGCTTCACGCCGAAAC GCCGCAACTGGCGCGTCAGGCAGGCGGCCACGCCGGTCTGGTACAAGCGCGCCTCGTTGCGCCGCACCCACCTGCAGTCC GGCGCCGCGCGCGTCGCGCGCCATCGGCCCGCCAGCTTGCGCCGGCCCGTGCGCTTCTTCTGA
Upstream 100 bases:
>100_bases AGCTGCCGCGCTCCGGTTCGGTGAACGTCGACGCGAAGGAAGCGGCGCGTTCGTCCGATTCGAACAAGGCGTGATGAACG CGCGCTGACGGGACGCCGCG
Downstream 100 bases:
>100_bases GCGTGCGCGACGATGCCGGCGATGCGTGCCCAACACCTGAACCGAGGGCCTGCGTGAGCGACCCCCAGCACAATCCGGAC GAAGGCCGGGAAGAAACCTT
Product: sec-independent translocase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MLDLGLSKMALIGVVALVVLGPERLPRVARTAGALFGRAQRYINDVKAEVSREIELDALRTMRTDFESAARNVENTIHDN LRQHEADLNDAWSSAVSGEAASPVAVSADGAAGAGSMSWQGSGTAASAGFTPKRRNWRVRQAATPVWYKRASLRRTHLQS GAARVARHRPASLRRPVRFF
Sequences:
>Translated_180_residues MLDLGLSKMALIGVVALVVLGPERLPRVARTAGALFGRAQRYINDVKAEVSREIELDALRTMRTDFESAARNVENTIHDN LRQHEADLNDAWSSAVSGEAASPVAVSADGAAGAGSMSWQGSGTAASAGFTPKRRNWRVRQAATPVWYKRASLRRTHLQS GAARVARHRPASLRRPVRFF >Mature_180_residues MLDLGLSKMALIGVVALVVLGPERLPRVARTAGALFGRAQRYINDVKAEVSREIELDALRTMRTDFESAARNVENTIHDN LRQHEADLNDAWSSAVSGEAASPVAVSADGAAGAGSMSWQGSGTAASAGFTPKRRNWRVRQAATPVWYKRASLRRTHLQS GAARVARHRPASLRRPVRFF
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG1826
COG function: function code U; Sec-independent protein secretion pathway components
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003369 - InterPro: IPR018448 - InterPro: IPR003998 [H]
Pfam domain/function: PF02416 MttA_Hcf106 [H]
EC number: NA
Molecular weight: Translated: 19588; Mature: 19588
Theoretical pI: Translated: 11.87; Mature: 11.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDLGLSKMALIGVVALVVLGPERLPRVARTAGALFGRAQRYINDVKAEVSREIELDALR CCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TMRTDFESAARNVENTIHDNLRQHEADLNDAWSSAVSGEAASPVAVSADGAAGAGSMSWQ HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCC GSGTAASAGFTPKRRNWRVRQAATPVWYKRASLRRTHLQSGAARVARHRPASLRRPVRFF CCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCC >Mature Secondary Structure MLDLGLSKMALIGVVALVVLGPERLPRVARTAGALFGRAQRYINDVKAEVSREIELDALR CCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TMRTDFESAARNVENTIHDNLRQHEADLNDAWSSAVSGEAASPVAVSADGAAGAGSMSWQ HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCC GSGTAASAGFTPKRRNWRVRQAATPVWYKRASLRRTHLQSGAARVARHRPASLRRPVRFF CCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA