| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is mlaE [H]
Identifier: 238025995
GI number: 238025995
Start: 342944
End: 343711
Strand: Direct
Name: mlaE [H]
Synonym: bglu_1g03210
Alternate gene names: 238025995
Gene position: 342944-343711 (Clockwise)
Preceding gene: 238025994
Following gene: 238025996
Centisome position: 8.78
GC content: 67.06
Gene sequence:
>768_bases ATGATCAGCGCTATCGGTCGTTTCGTGCTGGGCGGGCTCGAACGCACGGGTTATGCCACGCGCTTGTTCGTGCGGCTCGT GCTCGAATTCTTTCCGCTGCTGCGGCGCCCGCGGCTCGTCACGAAACAGATCCACTTCCTCGGCAATTATTCGTTTGTGA TCATTGCCGTGTCGGGCCTGTTCGTCGGCTTCGTGCTGGGGCTGCAGGGCTACTACACGCTGAACCGCTACGGCGCCGAG CAGTCGCTCGGGCTGCTGGTGGCGCTGTCGCTGGTGCGCGAACTCGGGCCGGTGGTCACCGCGCTGCTGTACGCGGGCCG CGCCGGCACCTCGCTCACCGCCGAGATCGGCCTGATGAAGGCGGGCGAGCAGCTGACCGCGCTCGAGATGATGGCGGTGG ACCCGATCAAGACCGTGATCGCGCCGCGCATGTGGGCCGGCATCATCGCGATGCCGCTGCTCTCGGCGATCTTCTGCGCG GTGGGCGTGATCGGCGGTTACGTGGTGGGCGTGATCCTGATCGGCGTCGATCCGGGCGCGTTCTGGTCGCAGATGCAGGG CGGCGTGGACGCCTGGAGCGACGTCGGCAACGGCGTGCTCAAGAGCGTCGTATTCGGCTTCGCGGTCACCTTCGTGGCGC TCTACCAGGGCTACGAGGCGAAGCCGACGCCCGAGGGCGTCTCGCGCGCCACCACCCGCACCGTCGTGTACGCCTCGCTC GCGGTACTCGGCCTCGATTTCCTGCTGACCGCGCTGATGTTCAGCTGA
Upstream 100 bases:
>100_bases GCGTGCGGCAGTTCATCGACGGCGTGCCCGACGGCCCGTTCCGGTTCCACTACACGAGTCCGCCGCTCGATGCGGACTTC GGCCTTGGCGGAGGGCGCCG
Downstream 100 bases:
>100_bases GTCGGCCTTTTCAGAGATGACGATGAAAAAGACTGCTCTCGACTTCTGGGTCGGCCTGTTCGTGCTGGTGGGTTTCCTGG CGCTGCTGTTTCTCGCCCTG
Product: ABC transporter inner membrane subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MISAIGRFVLGGLERTGYATRLFVRLVLEFFPLLRRPRLVTKQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGAE QSLGLLVALSLVRELGPVVTALLYAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPIKTVIAPRMWAGIIAMPLLSAIFCA VGVIGGYVVGVILIGVDPGAFWSQMQGGVDAWSDVGNGVLKSVVFGFAVTFVALYQGYEAKPTPEGVSRATTRTVVYASL AVLGLDFLLTALMFS
Sequences:
>Translated_255_residues MISAIGRFVLGGLERTGYATRLFVRLVLEFFPLLRRPRLVTKQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGAE QSLGLLVALSLVRELGPVVTALLYAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPIKTVIAPRMWAGIIAMPLLSAIFCA VGVIGGYVVGVILIGVDPGAFWSQMQGGVDAWSDVGNGVLKSVVFGFAVTFVALYQGYEAKPTPEGVSRATTRTVVYASL AVLGLDFLLTALMFS >Mature_255_residues MISAIGRFVLGGLERTGYATRLFVRLVLEFFPLLRRPRLVTKQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGAE QSLGLLVALSLVRELGPVVTALLYAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPIKTVIAPRMWAGIIAMPLLSAIFCA VGVIGGYVVGVILIGVDPGAFWSQMQGGVDAWSDVGNGVLKSVVFGFAVTFVALYQGYEAKPTPEGVSRATTRTVVYASL AVLGLDFLLTALMFS
Specific function: Part of the ABC transporter complex mlaFEDB that actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner memb
COG id: COG0767
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaE permease family [H]
Homologues:
Organism=Escherichia coli, GI1789585, Length=220, Percent_Identity=61.8181818181818, Blast_Score=273, Evalue=1e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003453 [H]
Pfam domain/function: PF02405 DUF140 [H]
EC number: NA
Molecular weight: Translated: 27225; Mature: 27225
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISAIGRFVLGGLERTGYATRLFVRLVLEFFPLLRRPRLVTKQIHFLGNYSFVIIAVSGL CCHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHH FVGFVLGLQGYYTLNRYGAEQSLGLLVALSLVRELGPVVTALLYAGRAGTSLTAEIGLMK HHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH AGEQLTALEMMAVDPIKTVIAPRMWAGIIAMPLLSAIFCAVGVIGGYVVGVILIGVDPGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCH FWSQMQGGVDAWSDVGNGVLKSVVFGFAVTFVALYQGYEAKPTPEGVSRATTRTVVYASL HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH AVLGLDFLLTALMFS HHHHHHHHHHHHHCC >Mature Secondary Structure MISAIGRFVLGGLERTGYATRLFVRLVLEFFPLLRRPRLVTKQIHFLGNYSFVIIAVSGL CCHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHH FVGFVLGLQGYYTLNRYGAEQSLGLLVALSLVRELGPVVTALLYAGRAGTSLTAEIGLMK HHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH AGEQLTALEMMAVDPIKTVIAPRMWAGIIAMPLLSAIFCAVGVIGGYVVGVILIGVDPGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCH FWSQMQGGVDAWSDVGNGVLKSVVFGFAVTFVALYQGYEAKPTPEGVSRATTRTVVYASL HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH AVLGLDFLLTALMFS HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]