| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is gltB [H]
Identifier: 238025988
GI number: 238025988
Start: 334451
End: 335917
Strand: Direct
Name: gltB [H]
Synonym: bglu_1g03140
Alternate gene names: 238025988
Gene position: 334451-335917 (Clockwise)
Preceding gene: 238025987
Following gene: 238025990
Centisome position: 8.56
GC content: 67.62
Gene sequence:
>1467_bases ATGGGCAAGGCAACCGGTTTTCTCGAGTTCGAACGCCGCCACGAGGCGTACGAGGCTCCGCTCACGCGCGTGAAGCACTA CAAGGAATTCGTCGCGGCGCTGTCCGACGACGACGCGAAGATCCAGGGCGCGCGCTGCATGGATTGCGGCATCCCGTTCT GCAACAACGGCTGCCCGGTCAACAACATCATCCCGGACTTCAACGACCTGGTGTACCGCCAGGACTGGCAGCAGGCCATC GAGGTCCTCCACTCGACCAACAACTTCCCCGAGTTCACGGGCCGCATCTGCCCGGCGCCGTGCGAGGCGGCCTGCACGCT CGGCATCAACAACGATCCGGTCGGCATCAAGTCGATCGAGCACGCGATCATCGACAAGGCCTGGGCCGAAGGCTGGGTCA AGCCGCTGCCGGCCGAACACAAGACCGGCAAGAAGGTCGCCGTGGTCGGCTCCGGCCCGGCGGGCCTGGCGGCCGCGCAG CAGCTCGCGCGCGCCGGCCACGAGGTGACGGTGTTCGAGAAGAACGACCGGATCGGCGGCCTGCTGCGCTACGGCATCCC CGACTTCAAGCTCGAGAAGTGGCTGATCGACCGCCGCATGCGCCAGATGGAAGCCGAGGGCGTCACGTTCCGCACCAGCG TGTTCATCGGCAAGGAAGCGCTGCCGGACATGATCGGCAACATGGCGAAGGAAACCATCTCGCCCGAGCAGCTGAAGGAA ACGTTCGACGCGGTGGTGATCGCAGGCGGCTCCGAGACGCCGCGCGACCTGCCGGTGCCGGGCCGCGAGCTCGAAGGCGT CCATTTCGCGATGGATTTCCTGCCGCAGCAGAACCGCGTGAACGCCGGTGACAAGCTGGCCGACCAACTGCTTGCCAAGG GCAAGCACGTCGTCGTGATCGGCGGCGGCGACACGGGTTCGGACTGCGTGGGCACCTCGAACCGCCACGGCGCGAAGTCG GTCACGCAGTTCGAGCTGTTGCCGCAGCCGCCGGAAACCGAGAACAAGCCGCTCGTCTGGCCGTACTGGCCGATCAAGCT GCGCACCTCGTCGTCGCACGAGGAAGGCTGCGAGCGCGACTGGGCGGTGGCGACCAAGCGCCTCGAGGGCAAGAACGGCA AGGTCGAGAAGCTGATCGCCGTGCGCGTCGAATGGAAGGACGGCAAGATGGTCGAGGTGGCCGGCTCCGAGTTCGAGATG AAGGCGGACCTGGTGCTGCTGGCGATGGGCTTCACGCAGCCGGCCGCGCCGGTGCTCGACGCGTTCGGCGTGGCCAAGGA CGCGCGCGGCAACGCACGCGCCGCCACCGAAGGCGAGCGTGCCTACACGACCTCGGTCGACAAGGTGTTCGCGGCCGGCG ACATGCGCCGCGGCCAGTCGCTGGTGGTCTGGGCGATCCGCGAAGGCCGCCAGTGCGCGCGCGCCGTCGACGCGTTCCTG ATGGGGCATTCGGAACTGCCGCGCTGA
Upstream 100 bases:
>100_bases CCCGGCGCACGGCAGCCGCGAAACGACATAGCGGACGCGCCCGCCGCCACCGGCGGGCGCGTTCCCCACCCGACACACCC CCGATTCAGACGAGAACCTT
Downstream 100 bases:
>100_bases GCGGGCGGCGGCGCGCGCCGCCGGACGAACGAAAAAAGAGCACGCCCCGGCGTGCTCTTTTTGCTGGCGGGGCCGGTCAG CCCCGGTGTCTCAGGCCGTG
Product: glutamate synthase subunit beta
Products: NA
Alternate protein names: NADPH-GOGAT [H]
Number of amino acids: Translated: 488; Mature: 487
Protein sequence:
>488_residues MGKATGFLEFERRHEAYEAPLTRVKHYKEFVAALSDDDAKIQGARCMDCGIPFCNNGCPVNNIIPDFNDLVYRQDWQQAI EVLHSTNNFPEFTGRICPAPCEAACTLGINNDPVGIKSIEHAIIDKAWAEGWVKPLPAEHKTGKKVAVVGSGPAGLAAAQ QLARAGHEVTVFEKNDRIGGLLRYGIPDFKLEKWLIDRRMRQMEAEGVTFRTSVFIGKEALPDMIGNMAKETISPEQLKE TFDAVVIAGGSETPRDLPVPGRELEGVHFAMDFLPQQNRVNAGDKLADQLLAKGKHVVVIGGGDTGSDCVGTSNRHGAKS VTQFELLPQPPETENKPLVWPYWPIKLRTSSSHEEGCERDWAVATKRLEGKNGKVEKLIAVRVEWKDGKMVEVAGSEFEM KADLVLLAMGFTQPAAPVLDAFGVAKDARGNARAATEGERAYTTSVDKVFAAGDMRRGQSLVVWAIREGRQCARAVDAFL MGHSELPR
Sequences:
>Translated_488_residues MGKATGFLEFERRHEAYEAPLTRVKHYKEFVAALSDDDAKIQGARCMDCGIPFCNNGCPVNNIIPDFNDLVYRQDWQQAI EVLHSTNNFPEFTGRICPAPCEAACTLGINNDPVGIKSIEHAIIDKAWAEGWVKPLPAEHKTGKKVAVVGSGPAGLAAAQ QLARAGHEVTVFEKNDRIGGLLRYGIPDFKLEKWLIDRRMRQMEAEGVTFRTSVFIGKEALPDMIGNMAKETISPEQLKE TFDAVVIAGGSETPRDLPVPGRELEGVHFAMDFLPQQNRVNAGDKLADQLLAKGKHVVVIGGGDTGSDCVGTSNRHGAKS VTQFELLPQPPETENKPLVWPYWPIKLRTSSSHEEGCERDWAVATKRLEGKNGKVEKLIAVRVEWKDGKMVEVAGSEFEM KADLVLLAMGFTQPAAPVLDAFGVAKDARGNARAATEGERAYTTSVDKVFAAGDMRRGQSLVVWAIREGRQCARAVDAFL MGHSELPR >Mature_487_residues GKATGFLEFERRHEAYEAPLTRVKHYKEFVAALSDDDAKIQGARCMDCGIPFCNNGCPVNNIIPDFNDLVYRQDWQQAIE VLHSTNNFPEFTGRICPAPCEAACTLGINNDPVGIKSIEHAIIDKAWAEGWVKPLPAEHKTGKKVAVVGSGPAGLAAAQQ LARAGHEVTVFEKNDRIGGLLRYGIPDFKLEKWLIDRRMRQMEAEGVTFRTSVFIGKEALPDMIGNMAKETISPEQLKET FDAVVIAGGSETPRDLPVPGRELEGVHFAMDFLPQQNRVNAGDKLADQLLAKGKHVVVIGGGDTGSDCVGTSNRHGAKSV TQFELLPQPPETENKPLVWPYWPIKLRTSSSHEEGCERDWAVATKRLEGKNGKVEKLIAVRVEWKDGKMVEVAGSEFEMK ADLVLLAMGFTQPAAPVLDAFGVAKDARGNARAATEGERAYTTSVDKVFAAGDMRRGQSLVVWAIREGRQCARAVDAFLM GHSELPR
Specific function: NITROGEN METABOLISM, GLUTAMATE BIOSYNTHESIS. THE CATALYZED REACTION BRINGS TOGETHER THE NITROGEN AND CARBON METABOLISM. [C]
COG id: COG0493
COG function: function code ER; NADPH-dependent glutamate synthase beta chain and related oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamate synthase family [H]
Homologues:
Organism=Homo sapiens, GI119943098, Length=491, Percent_Identity=24.6435845213849, Blast_Score=103, Evalue=3e-22, Organism=Escherichia coli, GI1789606, Length=486, Percent_Identity=34.9794238683128, Blast_Score=243, Evalue=2e-65, Organism=Escherichia coli, GI1788811, Length=467, Percent_Identity=35.7601713062098, Blast_Score=242, Evalue=5e-65, Organism=Escherichia coli, GI87082180, Length=468, Percent_Identity=34.4017094017094, Blast_Score=219, Evalue=4e-58, Organism=Escherichia coli, GI1788468, Length=462, Percent_Identity=28.3549783549784, Blast_Score=150, Evalue=2e-37, Organism=Escherichia coli, GI1789243, Length=445, Percent_Identity=28.5393258426966, Blast_Score=124, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17570289, Length=508, Percent_Identity=46.259842519685, Blast_Score=434, Evalue=1e-122, Organism=Caenorhabditis elegans, GI71984108, Length=469, Percent_Identity=25.7995735607676, Blast_Score=94, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6320030, Length=502, Percent_Identity=49.203187250996, Blast_Score=470, Evalue=1e-133, Organism=Drosophila melanogaster, GI28574881, Length=503, Percent_Identity=49.5029821073559, Blast_Score=472, Evalue=1e-133, Organism=Drosophila melanogaster, GI24665539, Length=503, Percent_Identity=49.5029821073559, Blast_Score=472, Evalue=1e-133, Organism=Drosophila melanogaster, GI24665547, Length=503, Percent_Identity=49.5029821073559, Blast_Score=471, Evalue=1e-133, Organism=Drosophila melanogaster, GI24665543, Length=503, Percent_Identity=49.5029821073559, Blast_Score=471, Evalue=1e-133, Organism=Drosophila melanogaster, GI24640763, Length=484, Percent_Identity=23.3471074380165, Blast_Score=90, Evalue=4e-18, Organism=Drosophila melanogaster, GI18858217, Length=484, Percent_Identity=23.3471074380165, Blast_Score=90, Evalue=4e-18,
Paralogues:
None
Copy number: 620 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR012285 - InterPro: IPR006005 - InterPro: IPR009051 - InterPro: IPR016040 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: =1.4.1.13 [H]
Molecular weight: Translated: 53503; Mature: 53371
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKATGFLEFERRHEAYEAPLTRVKHYKEFVAALSDDDAKIQGARCMDCGIPFCNNGCPV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCEEEECCCCCCCCCCCC NNIIPDFNDLVYRQDWQQAIEVLHSTNNFPEFTGRICPAPCEAACTLGINNDPVGIKSIE CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCEEEECCCCCCCCHHHHH HAIIDKAWAEGWVKPLPAEHKTGKKVAVVGSGPAGLAAAQQLARAGHEVTVFEKNDRIGG HHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCC LLRYGIPDFKLEKWLIDRRMRQMEAEGVTFRTSVFIGKEALPDMIGNMAKETISPEQLKE EEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHHHHHCCCHHHHHH TFDAVVIAGGSETPRDLPVPGRELEGVHFAMDFLPQQNRVNAGDKLADQLLAKGKHVVVI HHCEEEEECCCCCCCCCCCCCCCCCCCEEEHHHCCCCCCCCCHHHHHHHHHHCCCEEEEE GGGDTGSDCVGTSNRHGAKSVTQFELLPQPPETENKPLVWPYWPIKLRTSSSHEEGCERD ECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCEEEECCCCCHHHCCHH WAVATKRLEGKNGKVEKLIAVRVEWKDGKMVEVAGSEFEMKADLVLLAMGFTQPAAPVLD HHHHHHHHCCCCCCEEEEEEEEEEECCCCEEEECCCCEEEECCEEEEEECCCCCCHHHHH AFGVAKDARGNARAATEGERAYTTSVDKVFAAGDMRRGQSLVVWAIREGRQCARAVDAFL HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHH MGHSELPR HCCCCCCC >Mature Secondary Structure GKATGFLEFERRHEAYEAPLTRVKHYKEFVAALSDDDAKIQGARCMDCGIPFCNNGCPV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCEEEECCCCCCCCCCCC NNIIPDFNDLVYRQDWQQAIEVLHSTNNFPEFTGRICPAPCEAACTLGINNDPVGIKSIE CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCEEEECCCCCCCCHHHHH HAIIDKAWAEGWVKPLPAEHKTGKKVAVVGSGPAGLAAAQQLARAGHEVTVFEKNDRIGG HHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCC LLRYGIPDFKLEKWLIDRRMRQMEAEGVTFRTSVFIGKEALPDMIGNMAKETISPEQLKE EEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHHHHHCCCHHHHHH TFDAVVIAGGSETPRDLPVPGRELEGVHFAMDFLPQQNRVNAGDKLADQLLAKGKHVVVI HHCEEEEECCCCCCCCCCCCCCCCCCCEEEHHHCCCCCCCCCHHHHHHHHHHCCCEEEEE GGGDTGSDCVGTSNRHGAKSVTQFELLPQPPETENKPLVWPYWPIKLRTSSSHEEGCERD ECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCEEEECCCCCHHHCCHH WAVATKRLEGKNGKVEKLIAVRVEWKDGKMVEVAGSEFEMKADLVLLAMGFTQPAAPVLD HHHHHHHHCCCCCCEEEEEEEEEEECCCCEEEECCCCEEEECCEEEEEECCCCCCHHHHH AFGVAKDARGNARAATEGERAYTTSVDKVFAAGDMRRGQSLVVWAIREGRQCARAVDAFL HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHH MGHSELPR HCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 11029411 [H]