Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238025730

Identifier: 238025730

GI number: 238025730

Start: 54372

End: 54683

Strand: Reverse

Name: 238025730

Synonym: bglu_1g00520

Alternate gene names: NA

Gene position: 54683-54372 (Counterclockwise)

Preceding gene: 238025731

Following gene: 238025728

Centisome position: 1.4

GC content: 63.78

Gene sequence:

>312_bases
ATGATCCACAAGCTCACATCGGAAGCACGCAAGACGCAGCTCGAGACGCTGCCGCACTGGTCGGCCGTACCCGGCCGCGA
CGCGATTCAGCGCAGCCTGCGCTTCACCGACTTCAACGCCGCGTTCGGGTTCATGACCCGCGTGGCGATCAAGGCGCAGG
AAATGGATCACCATCCAGAGTGGTTCAACGTCTACAACCGCGTCGACATCACGCTGTCCACGCACGACGCGAACGGGCTG
ACCGAACGCGACATCCAACTCGCGCGCTTCATCGACGAAGTCGGCCGCGACGCTCACGCGCAGCTCGGCTGA

Upstream 100 bases:

>100_bases
TGGCCGCAAATATGGAAGAATGTCCCGATGGCGCGCCGACGCTTCGCGCGGCTCGCGCGACGGCGGCCAGGCGCGCGTCA
CTGCACACGAGGGCACTGCC

Downstream 100 bases:

>100_bases
GCCGCACGCCACGACGGGCGGCATTGCGCATCGCCGGCGTGATGCGGCCCGTTTATTTCGCGTTCATCGCTCTTGCCACG
CCTCGTTCCGGCGCCCCGCC

Product: Pterin-4-alpha-carbinolamine dehydratase

Products: NA

Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD [H]

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MIHKLTSEARKTQLETLPHWSAVPGRDAIQRSLRFTDFNAAFGFMTRVAIKAQEMDHHPEWFNVYNRVDITLSTHDANGL
TERDIQLARFIDEVGRDAHAQLG

Sequences:

>Translated_103_residues
MIHKLTSEARKTQLETLPHWSAVPGRDAIQRSLRFTDFNAAFGFMTRVAIKAQEMDHHPEWFNVYNRVDITLSTHDANGL
TERDIQLARFIDEVGRDAHAQLG
>Mature_103_residues
MIHKLTSEARKTQLETLPHWSAVPGRDAIQRSLRFTDFNAAFGFMTRVAIKAQEMDHHPEWFNVYNRVDITLSTHDANGL
TERDIQLARFIDEVGRDAHAQLG

Specific function: Unknown

COG id: COG2154

COG function: function code H; Pterin-4a-carbinolamine dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family [H]

Homologues:

Organism=Homo sapiens, GI4557831, Length=95, Percent_Identity=57.8947368421053, Blast_Score=118, Evalue=1e-27,
Organism=Homo sapiens, GI134133240, Length=95, Percent_Identity=50.5263157894737, Blast_Score=110, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI115533705, Length=92, Percent_Identity=60.8695652173913, Blast_Score=122, Evalue=3e-29,
Organism=Drosophila melanogaster, GI45549100, Length=94, Percent_Identity=47.8723404255319, Blast_Score=100, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001533 [H]

Pfam domain/function: PF01329 Pterin_4a [H]

EC number: =4.2.1.96 [H]

Molecular weight: Translated: 11831; Mature: 11831

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHKLTSEARKTQLETLPHWSAVPGRDAIQRSLRFTDFNAAFGFMTRVAIKAQEMDHHPE
CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCH
WFNVYNRVDITLSTHDANGLTERDIQLARFIDEVGRDAHAQLG
HHHHHCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MIHKLTSEARKTQLETLPHWSAVPGRDAIQRSLRFTDFNAAFGFMTRVAIKAQEMDHHPE
CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCH
WFNVYNRVDITLSTHDANGLTERDIQLARFIDEVGRDAHAQLG
HHHHHCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA