| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238025730
Identifier: 238025730
GI number: 238025730
Start: 54372
End: 54683
Strand: Reverse
Name: 238025730
Synonym: bglu_1g00520
Alternate gene names: NA
Gene position: 54683-54372 (Counterclockwise)
Preceding gene: 238025731
Following gene: 238025728
Centisome position: 1.4
GC content: 63.78
Gene sequence:
>312_bases ATGATCCACAAGCTCACATCGGAAGCACGCAAGACGCAGCTCGAGACGCTGCCGCACTGGTCGGCCGTACCCGGCCGCGA CGCGATTCAGCGCAGCCTGCGCTTCACCGACTTCAACGCCGCGTTCGGGTTCATGACCCGCGTGGCGATCAAGGCGCAGG AAATGGATCACCATCCAGAGTGGTTCAACGTCTACAACCGCGTCGACATCACGCTGTCCACGCACGACGCGAACGGGCTG ACCGAACGCGACATCCAACTCGCGCGCTTCATCGACGAAGTCGGCCGCGACGCTCACGCGCAGCTCGGCTGA
Upstream 100 bases:
>100_bases TGGCCGCAAATATGGAAGAATGTCCCGATGGCGCGCCGACGCTTCGCGCGGCTCGCGCGACGGCGGCCAGGCGCGCGTCA CTGCACACGAGGGCACTGCC
Downstream 100 bases:
>100_bases GCCGCACGCCACGACGGGCGGCATTGCGCATCGCCGGCGTGATGCGGCCCGTTTATTTCGCGTTCATCGCTCTTGCCACG CCTCGTTCCGGCGCCCCGCC
Product: Pterin-4-alpha-carbinolamine dehydratase
Products: NA
Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD [H]
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MIHKLTSEARKTQLETLPHWSAVPGRDAIQRSLRFTDFNAAFGFMTRVAIKAQEMDHHPEWFNVYNRVDITLSTHDANGL TERDIQLARFIDEVGRDAHAQLG
Sequences:
>Translated_103_residues MIHKLTSEARKTQLETLPHWSAVPGRDAIQRSLRFTDFNAAFGFMTRVAIKAQEMDHHPEWFNVYNRVDITLSTHDANGL TERDIQLARFIDEVGRDAHAQLG >Mature_103_residues MIHKLTSEARKTQLETLPHWSAVPGRDAIQRSLRFTDFNAAFGFMTRVAIKAQEMDHHPEWFNVYNRVDITLSTHDANGL TERDIQLARFIDEVGRDAHAQLG
Specific function: Unknown
COG id: COG2154
COG function: function code H; Pterin-4a-carbinolamine dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI4557831, Length=95, Percent_Identity=57.8947368421053, Blast_Score=118, Evalue=1e-27, Organism=Homo sapiens, GI134133240, Length=95, Percent_Identity=50.5263157894737, Blast_Score=110, Evalue=2e-25, Organism=Caenorhabditis elegans, GI115533705, Length=92, Percent_Identity=60.8695652173913, Blast_Score=122, Evalue=3e-29, Organism=Drosophila melanogaster, GI45549100, Length=94, Percent_Identity=47.8723404255319, Blast_Score=100, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001533 [H]
Pfam domain/function: PF01329 Pterin_4a [H]
EC number: =4.2.1.96 [H]
Molecular weight: Translated: 11831; Mature: 11831
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHKLTSEARKTQLETLPHWSAVPGRDAIQRSLRFTDFNAAFGFMTRVAIKAQEMDHHPE CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCH WFNVYNRVDITLSTHDANGLTERDIQLARFIDEVGRDAHAQLG HHHHHCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MIHKLTSEARKTQLETLPHWSAVPGRDAIQRSLRFTDFNAAFGFMTRVAIKAQEMDHHPE CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCH WFNVYNRVDITLSTHDANGLTERDIQLARFIDEVGRDAHAQLG HHHHHCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA