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The map label for this gene is 238025576

Identifier: 238025576

GI number: 238025576

Start: 2820233

End: 2821081

Strand: Reverse

Name: 238025576

Synonym: bglu_2g22730

Alternate gene names: NA

Gene position: 2821081-2820233 (Counterclockwise)

Preceding gene: 238025577

Following gene: 238025575

Centisome position: 99.78

GC content: 70.32

Gene sequence:

>849_bases
TTGACCGTTTCCCATTCTGTCGTGGACGAAACCCAAATCGATGCCGCTGCCGCTACCTCGGGCAGCTCGTTCTATCACGC
GATGCGGATCCTGCCGGCTCCGCAGCGCGAGGCCATGTTCCAGGTGTATGCGTTCTGCCGCGCCGTCGACGACATCGCCG
ACGATGGCGGCACGCGCGAGGAACGCGCGGCGGGGCTCGACCGCTGGCGCGCCGACATCGACGCCTGCTTCGCCGGCCAG
CCGCGCGCCTCGCTCGTGCCGCTCACGCGGGAAATCCGTCGGTTCGGCCTGAAGCGCGAGGATTTCCACGCCATGATCGA
CGGCATGGCGATGGATGCGGCCGAGGATATCTGCGCACCCGACGAAGCCACGCTCGATCTGTATTGCGATCGCGTCGCGA
GTTCGGCCGGGCGGCTGTCGGTGAGAATTTTCGGGATGCAGGAGGCGCCCGGCATCGAGCTGGCGCACCATCTCGGCCGC
GCGCTGCAGCTGACCAACATCCTGCGCGACATCGACGAGGACGCCGACATCCACCGCTGCTACCTGCCGCGCGAGCTGCT
CGAGCGCGAAGGCATCGCGCTCGGCGATCCGCGCGCGATCGCGCGGCACCCGGCGCTGCCGCGTGTGTGCGCGACGCTGG
CCGAGCGCGCGCTGGCGCATTTCGCGCAGGCCGACCGCGTGATGGACGGCGCGCCGCGCGCCCAGGTCCGCGCCCCGCGC
ATCATGTCGGGCGCCTATCGCTGCATCCTCGAGGCGGCGCTGGCCCGAGGCTTCGCGGCACCGCGCCAGCCGCTGCGCAA
GCCGCGCCTGCGCATGCTGCTGATCGCGCTGCGCTACGCGTTTTTCTGA

Upstream 100 bases:

>100_bases
CCTGTCTGCGCGCATCGTTCGCGCATCTCGCACGCAATTCCATCCCCCGCCGGGCATGGCTACTTCCATCGCCCGCGAGG
GCGTCTTAGCGGAGCTCGTC

Downstream 100 bases:

>100_bases
TTCGATGTCGGCCATCGACCGGGCGATCGGCGGATCGCCCGCCGCGCCGTTGGGTTTGCCGGCCCGACCGCGCTCAGGCG
TGGTACTTGAATGTGAGTGC

Product: Squalene/phytoene synthase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MTVSHSVVDETQIDAAAATSGSSFYHAMRILPAPQREAMFQVYAFCRAVDDIADDGGTREERAAGLDRWRADIDACFAGQ
PRASLVPLTREIRRFGLKREDFHAMIDGMAMDAAEDICAPDEATLDLYCDRVASSAGRLSVRIFGMQEAPGIELAHHLGR
ALQLTNILRDIDEDADIHRCYLPRELLEREGIALGDPRAIARHPALPRVCATLAERALAHFAQADRVMDGAPRAQVRAPR
IMSGAYRCILEAALARGFAAPRQPLRKPRLRMLLIALRYAFF

Sequences:

>Translated_282_residues
MTVSHSVVDETQIDAAAATSGSSFYHAMRILPAPQREAMFQVYAFCRAVDDIADDGGTREERAAGLDRWRADIDACFAGQ
PRASLVPLTREIRRFGLKREDFHAMIDGMAMDAAEDICAPDEATLDLYCDRVASSAGRLSVRIFGMQEAPGIELAHHLGR
ALQLTNILRDIDEDADIHRCYLPRELLEREGIALGDPRAIARHPALPRVCATLAERALAHFAQADRVMDGAPRAQVRAPR
IMSGAYRCILEAALARGFAAPRQPLRKPRLRMLLIALRYAFF
>Mature_281_residues
TVSHSVVDETQIDAAAATSGSSFYHAMRILPAPQREAMFQVYAFCRAVDDIADDGGTREERAAGLDRWRADIDACFAGQP
RASLVPLTREIRRFGLKREDFHAMIDGMAMDAAEDICAPDEATLDLYCDRVASSAGRLSVRIFGMQEAPGIELAHHLGRA
LQLTNILRDIDEDADIHRCYLPRELLEREGIALGDPRAIARHPALPRVCATLAERALAHFAQADRVMDGAPRAQVRAPRI
MSGAYRCILEAALARGFAAPRQPLRKPRLRMLLIALRYAFF

Specific function: Catalyzes the reaction from prephytoene diphosphate to phytoene. Probably part of an operon y4aABCD involved in the synthesis of an isoprenoid compound [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR017828
- InterPro:   IPR019845
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: =2.5.1.32 [H]

Molecular weight: Translated: 31238; Mature: 31107

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: PS01045 SQUALEN_PHYTOEN_SYN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVSHSVVDETQIDAAAATSGSSFYHAMRILPAPQREAMFQVYAFCRAVDDIADDGGTRE
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHH
ERAAGLDRWRADIDACFAGQPRASLVPLTREIRRFGLKREDFHAMIDGMAMDAAEDICAP
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
DEATLDLYCDRVASSAGRLSVRIFGMQEAPGIELAHHLGRALQLTNILRDIDEDADIHRC
CCCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
YLPRELLEREGIALGDPRAIARHPALPRVCATLAERALAHFAQADRVMDGAPRAQVRAPR
HCCHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCH
IMSGAYRCILEAALARGFAAPRQPLRKPRLRMLLIALRYAFF
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
TVSHSVVDETQIDAAAATSGSSFYHAMRILPAPQREAMFQVYAFCRAVDDIADDGGTRE
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHH
ERAAGLDRWRADIDACFAGQPRASLVPLTREIRRFGLKREDFHAMIDGMAMDAAEDICAP
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
DEATLDLYCDRVASSAGRLSVRIFGMQEAPGIELAHHLGRALQLTNILRDIDEDADIHRC
CCCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
YLPRELLEREGIALGDPRAIARHPALPRVCATLAERALAHFAQADRVMDGAPRAQVRAPR
HCCHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCH
IMSGAYRCILEAALARGFAAPRQPLRKPRLRMLLIALRYAFF
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]