| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238025574
Identifier: 238025574
GI number: 238025574
Start: 2816840
End: 2817547
Strand: Reverse
Name: 238025574
Synonym: bglu_2g22710
Alternate gene names: NA
Gene position: 2817547-2816840 (Counterclockwise)
Preceding gene: 238025575
Following gene: 238025573
Centisome position: 99.65
GC content: 77.54
Gene sequence:
>708_bases ATGCGGGTGGCCACCTCCACCCCGCGCGCGCCCGTGATCGCCGTCAGCGGCATGGCGTTCGAGGCGAGGATCGCGGCCGG CGACGGTGTCGAAACCGTGTTCGCCGCGCGCGCGGACCGGCTCGAACGCGCGCTGTCGCAAGCCATGGCGCGCGGCTGCG CCGGCATCGTCAGCTTCGGCACGGCGGGCGGGCTCGCGCCCGATCTCGCGCCGGGCACGCTGATCGTCGCCGATGCGATC GACGGCCCGTTCGGCGAGGTCGCGACCGACGCGGCCTGGCATCGCCGGCTGCTCGCCGCCCTGCGCGGCACGCCGCTCGC CGCGAGCGTGCGGCGCGGGCGGCTCGCGGCGGTCGGCGCGCCGGTGATCGACGCGCGGCACAAGGCCGTGCTGCACGCGC GCCACGGCGCGCTCGCGGTCGACATGGAATCGCACATCGCGGCGGCCTTCGCGGCGGCGCGCGGCGTGCCGTTCGCCGTC TGCCGCGCGATCGTCGATCCGTCGTGGCGCACCCTGCCGCCGGCCGCCACGGCCGGGCTGCGCGACGACGGCAGCACCGC GATCATGCCGATCCTGCGCGAACTCGCGAAGCAGCCGTCGCAGCTCGGCGCGCTGCTGAAGCTGGCCGGCGACGCGCGCG CCGCGAAGGCGACGCTGATCCAGGCGCGCCGCGCGTTCGAGCGCGAGGGCGCCTGGCGCGGCCTGTGA
Upstream 100 bases:
>100_bases GCGCTACCACGGCTATCGCAAGTTCTTCCCGCTGTGGGCGCTCGCGCGCTACCGCAATCTGCGACGCACCGGCACCCGGC GCGTGACGGTGGGCATGTAG
Downstream 100 bases:
>100_bases GCCGTCGCTCCCGCGGCCCCTGAGGCCTCGGGCCCGCGGCGCCCTTGCCCGGGCGGCGGCGCGCGGCGGCCGGCAGCACT GCCGCCCGGCTCGCGACGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Nucleoside Phosphorylase; Purine Phosphorylase Family; 5-Methylthioadenosine Nucleosidase; Purine Phosphorylases Family
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MRVATSTPRAPVIAVSGMAFEARIAAGDGVETVFAARADRLERALSQAMARGCAGIVSFGTAGGLAPDLAPGTLIVADAI DGPFGEVATDAAWHRRLLAALRGTPLAASVRRGRLAAVGAPVIDARHKAVLHARHGALAVDMESHIAAAFAAARGVPFAV CRAIVDPSWRTLPPAATAGLRDDGSTAIMPILRELAKQPSQLGALLKLAGDARAAKATLIQARRAFEREGAWRGL
Sequences:
>Translated_235_residues MRVATSTPRAPVIAVSGMAFEARIAAGDGVETVFAARADRLERALSQAMARGCAGIVSFGTAGGLAPDLAPGTLIVADAI DGPFGEVATDAAWHRRLLAALRGTPLAASVRRGRLAAVGAPVIDARHKAVLHARHGALAVDMESHIAAAFAAARGVPFAV CRAIVDPSWRTLPPAATAGLRDDGSTAIMPILRELAKQPSQLGALLKLAGDARAAKATLIQARRAFEREGAWRGL >Mature_235_residues MRVATSTPRAPVIAVSGMAFEARIAAGDGVETVFAARADRLERALSQAMARGCAGIVSFGTAGGLAPDLAPGTLIVADAI DGPFGEVATDAAWHRRLLAALRGTPLAASVRRGRLAAVGAPVIDARHKAVLHARHGALAVDMESHIAAAFAAARGVPFAV CRAIVDPSWRTLPPAATAGLRDDGSTAIMPILRELAKQPSQLGALLKLAGDARAAKATLIQARRAFEREGAWRGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24213; Mature: 24213
Theoretical pI: Translated: 11.56; Mature: 11.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVATSTPRAPVIAVSGMAFEARIAAGDGVETVFAARADRLERALSQAMARGCAGIVSFG CCCCCCCCCCCEEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TAGGLAPDLAPGTLIVADAIDGPFGEVATDAAWHRRLLAALRGTPLAASVRRGRLAAVGA CCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEECCC PVIDARHKAVLHARHGALAVDMESHIAAAFAAARGVPFAVCRAIVDPSWRTLPPAATAGL CHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHCCC RDDGSTAIMPILRELAKQPSQLGALLKLAGDARAAKATLIQARRAFEREGAWRGL CCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRVATSTPRAPVIAVSGMAFEARIAAGDGVETVFAARADRLERALSQAMARGCAGIVSFG CCCCCCCCCCCEEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TAGGLAPDLAPGTLIVADAIDGPFGEVATDAAWHRRLLAALRGTPLAASVRRGRLAAVGA CCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEECCC PVIDARHKAVLHARHGALAVDMESHIAAAFAAARGVPFAVCRAIVDPSWRTLPPAATAGL CHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHCCC RDDGSTAIMPILRELAKQPSQLGALLKLAGDARAAKATLIQARRAFEREGAWRGL CCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA