| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238025560
Identifier: 238025560
GI number: 238025560
Start: 2798367
End: 2798705
Strand: Direct
Name: 238025560
Synonym: bglu_2g22570
Alternate gene names: NA
Gene position: 2798367-2798705 (Clockwise)
Preceding gene: 238025559
Following gene: 238025561
Centisome position: 98.98
GC content: 70.5
Gene sequence:
>339_bases ATGGAACTGCTGACCACCCCCGCGCCCGCCGGCCCGCTGCTCGTCCGCCCGACGGACGCCCATCTCGATGCCGGCAACGT GCAGGCGTTCAAGGACGCGATCGCACCGCTGCTCGCCCAGCAGGCGCGCATCGTGTTCGACATGTCGTCGCTCACGTTCG TCGACAGCTCGGGGCTCGGCGCGCTGCTCGCCTGCCTGCGCGAGACGCACCGGCGCGGCGGCGACTTCAAGCTCTGCTCG ATGACGCGGCCTGTCAACGCGCTGTTCGAGCTGATGCGCATGCACCGCGTGTTCAGCGTCCACCGCAGCCAGGAGGAGGC CCTGGCCGCCTTCGCCTGA
Upstream 100 bases:
>100_bases CCGCCGCCCGCGCCCCAGTGATCGCCTCGCCCCGCAGACCGGGCGCGCCGCCGGCCGTCGGGGCACGCCCCTCGCCGCGC GCGTCCTTTGAGGACACCCC
Downstream 100 bases:
>100_bases GCGCGCCGCCAGCCGTGGCGCAGCCGGCTGCCCCGCGCGACGCGGGCGCGCGCCACGATCGCGTCACACTTTTCGCCGCG GCCGGTGCTGCAATCCAGCC
Product: Anti-sigma factor antagonist
Products: NA
Alternate protein names: Anti-Sigma Factor Antagonist; Anti-Anti-Sigma Regulatory Factor SpoIIAA; Anti-Sigma B Factor Antagonist; Anti-Anti-Sigma Factor
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MELLTTPAPAGPLLVRPTDAHLDAGNVQAFKDAIAPLLAQQARIVFDMSSLTFVDSSGLGALLACLRETHRRGGDFKLCS MTRPVNALFELMRMHRVFSVHRSQEEALAAFA
Sequences:
>Translated_112_residues MELLTTPAPAGPLLVRPTDAHLDAGNVQAFKDAIAPLLAQQARIVFDMSSLTFVDSSGLGALLACLRETHRRGGDFKLCS MTRPVNALFELMRMHRVFSVHRSQEEALAAFA >Mature_112_residues MELLTTPAPAGPLLVRPTDAHLDAGNVQAFKDAIAPLLAQQARIVFDMSSLTFVDSSGLGALLACLRETHRRGGDFKLCS MTRPVNALFELMRMHRVFSVHRSQEEALAAFA
Specific function: Unknown
COG id: COG1366
COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12207; Mature: 12207
Theoretical pI: Translated: 7.59; Mature: 7.59
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELLTTPAPAGPLLVRPTDAHLDAGNVQAFKDAIAPLLAQQARIVFDMSSLTFVDSSGLG CCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCHHEEECCCCHH ALLACLRETHRRGGDFKLCSMTRPVNALFELMRMHRVFSVHRSQEEALAAFA HHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCC >Mature Secondary Structure MELLTTPAPAGPLLVRPTDAHLDAGNVQAFKDAIAPLLAQQARIVFDMSSLTFVDSSGLG CCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCHHEEECCCCHH ALLACLRETHRRGGDFKLCSMTRPVNALFELMRMHRVFSVHRSQEEALAAFA HHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA