| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is yejA [C]
Identifier: 238025549
GI number: 238025549
Start: 2785251
End: 2787176
Strand: Reverse
Name: yejA [C]
Synonym: bglu_2g22460
Alternate gene names: 238025549
Gene position: 2787176-2785251 (Counterclockwise)
Preceding gene: 238025550
Following gene: 238025548
Centisome position: 98.58
GC content: 68.28
Gene sequence:
>1926_bases ATGAATTCTGTCTCGATGCGCCGGCCACGGGCCGCGGGTCACGCCCTGGCCGCCCGCCTCGCGCGCGTGGCCGCCTTCGC GTGCGTCGCGGCGGCGGCCTGCTTCATGCAGCCGGGCGCCGCGCTTGCCGTGCCGGCGATCGCGCAGTACGACGCGCCGA AGTACCCGCCGAACTTCACGCATTTCGACTACGCGGACCCGGACGCGCCCGCCGACGGCACGCTCACGTTCAACAACTAC AACCAGCTGCAGAGCTACGACTCGCTGAACCCGTTCCTGGTGCGCGGCGCGCCGGCGCCGGACATCCAGAACCTGATGTT CGACACGCTGATGCAGCGCAGCTGGGACGAGCTGGCCTCCGAATATCCGCTGATCGCCGACGACGTCGAGATCGCGCCGG ACCGCAGCTCGGCCACCTTCCACATCAATCCGGCCGCGCGTTTCTCGAACGGCGACCCGATCACGGCCGCCGACGTCAAG TATTCGTTCGACACGCTGGCGAGCCCGCAGGCCTCGCCGATCGTCAACGCGCAGTTCGAGGTGATTCGCCGCGCCACGGT GGTGGACCGCCTCACGGTGCGTTTCGATTTCAAGCGGCCCGAGCGCTCGGCGCCGCTGATCGCGGGCGATCTGCCGGTGT TCTCGCCGAAGTGGGGGCAGCGCGCCGACGGCACGCGCCCGCCGTTCGACCAGATCGTGGAGGTGCCGCCGATCGCGAGC GGCGCCTACCTGATCGCCGAGCGCGCCAACGACAAGCAGATCGTCTACGAGCGCAATCCGCAGTACTGGGCCGCCAACCT GCCGACGCGGCGCGGCATGTTCCGCTTCCAGCGCATCACGTTCAAGCTCTATGTCGACCTCTACACCATGCTCGAGGCGT TCAAGGCCGGCGACATCGACATGCGCATGGAATACAGCTCGTCGCAATGGGCGCGCCGCTACGTGGGCAAGAATTTCGAC AACGGGCTGCTGAAACAGGGGCTGTTTCCCGACGGCCCGCCGCAGATGCAGGGCTTCCTGATCAACCTGCGCCGGCCGAT GTTCCAGGACGTGCGGGTGCGCCACGCGCTGGCGCTGGCGTTCGACTACGACTGGATGAACCGGATGATGTTCTACGGCC AGTACCGGCGGACCAACAGCTTCTGGGAGGCGAGCCCGTTCGGCGCCACCGGCATGCCCAGCGAGAAGGAGCTGGCGCTG CTCGAGCCGTTCCGCAAGTCGCTGCCGCCCGAGGTGTTCGGGCCGATGGTGAAGCAGCCCAGCACGCTGCCGCCGAACTC GCTGCGCGGCAACCTCAAGCAGGCGCGGGCGCTGCTGGAGGCGGCCGGCTGGCACTATCGCGACGGCGCGCTGCGCGACG CCAACGGCACCCCGATGACGATCGAGATCATCGACGACGAGCCCGGCATGGACCGCCTGATCCTGCCGTACACGCAGGCG CTCGCGCTGCTCGGCATCCACGCCTGGCTGCACGAGATCGACAGCGCGCTGTATCAGAAGCGGCTCGACAACTTCCAGTA CGACATGACCACCTACATCTACGCGCCGGTCACGATCCCCGGCGCGGAGCTGACGCGCCGCTTCGGCAGCGCGGCCGCCG ACGAGCCCGGCTCGGAAAACTATCCGGGCCTGAAGTCGAAGGCGGTGGACGCGTTGATCCGCGACGTGCTCGCGGCCGAC ACGCTCGACCAGCTGGAGACGGCCACCCGCGCGCTCGACCGCGTGCTGATCAACCTCTACATCCTGGTGCCGCAGTACTA CCTGCCCAACGCGCGGATCGCCTACAAGAGCACCTACGGCCATCCGAAGGTGATTCCCGCGTCGTTCAACTACGAGGACT GGATGATCGACTACTGGTACCGCAAGCGCCCCGCCGCGGGCGCCGCGCACGCGGCCGGCGCCTCGGGTGCCGCCGGCAAG GAGTGA
Upstream 100 bases:
>100_bases CCCCCGCTGCTGCGCGGGCCGGCGCGGCGGCCCGCCTCCCTCAACCCTTGACGACGGCATGCCGGCCGCCCGGCGGCATG CCCTCCACCGCAGGATGACG
Downstream 100 bases:
>100_bases CACGATGCTCGCCTACATACTCAGACGTCTGCTGCTGATGATCCCGACCATCATCGGCGTGGTGACGATCACCTTCGTGG TCACGCAGTTCGTGCCGGGC
Product: family 5 extracellular solute-binding protein
Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 641; Mature: 641
Protein sequence:
>641_residues MNSVSMRRPRAAGHALAARLARVAAFACVAAAACFMQPGAALAVPAIAQYDAPKYPPNFTHFDYADPDAPADGTLTFNNY NQLQSYDSLNPFLVRGAPAPDIQNLMFDTLMQRSWDELASEYPLIADDVEIAPDRSSATFHINPAARFSNGDPITAADVK YSFDTLASPQASPIVNAQFEVIRRATVVDRLTVRFDFKRPERSAPLIAGDLPVFSPKWGQRADGTRPPFDQIVEVPPIAS GAYLIAERANDKQIVYERNPQYWAANLPTRRGMFRFQRITFKLYVDLYTMLEAFKAGDIDMRMEYSSSQWARRYVGKNFD NGLLKQGLFPDGPPQMQGFLINLRRPMFQDVRVRHALALAFDYDWMNRMMFYGQYRRTNSFWEASPFGATGMPSEKELAL LEPFRKSLPPEVFGPMVKQPSTLPPNSLRGNLKQARALLEAAGWHYRDGALRDANGTPMTIEIIDDEPGMDRLILPYTQA LALLGIHAWLHEIDSALYQKRLDNFQYDMTTYIYAPVTIPGAELTRRFGSAAADEPGSENYPGLKSKAVDALIRDVLAAD TLDQLETATRALDRVLINLYILVPQYYLPNARIAYKSTYGHPKVIPASFNYEDWMIDYWYRKRPAAGAAHAAGASGAAGK E
Sequences:
>Translated_641_residues MNSVSMRRPRAAGHALAARLARVAAFACVAAAACFMQPGAALAVPAIAQYDAPKYPPNFTHFDYADPDAPADGTLTFNNY NQLQSYDSLNPFLVRGAPAPDIQNLMFDTLMQRSWDELASEYPLIADDVEIAPDRSSATFHINPAARFSNGDPITAADVK YSFDTLASPQASPIVNAQFEVIRRATVVDRLTVRFDFKRPERSAPLIAGDLPVFSPKWGQRADGTRPPFDQIVEVPPIAS GAYLIAERANDKQIVYERNPQYWAANLPTRRGMFRFQRITFKLYVDLYTMLEAFKAGDIDMRMEYSSSQWARRYVGKNFD NGLLKQGLFPDGPPQMQGFLINLRRPMFQDVRVRHALALAFDYDWMNRMMFYGQYRRTNSFWEASPFGATGMPSEKELAL LEPFRKSLPPEVFGPMVKQPSTLPPNSLRGNLKQARALLEAAGWHYRDGALRDANGTPMTIEIIDDEPGMDRLILPYTQA LALLGIHAWLHEIDSALYQKRLDNFQYDMTTYIYAPVTIPGAELTRRFGSAAADEPGSENYPGLKSKAVDALIRDVLAAD TLDQLETATRALDRVLINLYILVPQYYLPNARIAYKSTYGHPKVIPASFNYEDWMIDYWYRKRPAAGAAHAAGASGAAGK E >Mature_641_residues MNSVSMRRPRAAGHALAARLARVAAFACVAAAACFMQPGAALAVPAIAQYDAPKYPPNFTHFDYADPDAPADGTLTFNNY NQLQSYDSLNPFLVRGAPAPDIQNLMFDTLMQRSWDELASEYPLIADDVEIAPDRSSATFHINPAARFSNGDPITAADVK YSFDTLASPQASPIVNAQFEVIRRATVVDRLTVRFDFKRPERSAPLIAGDLPVFSPKWGQRADGTRPPFDQIVEVPPIAS GAYLIAERANDKQIVYERNPQYWAANLPTRRGMFRFQRITFKLYVDLYTMLEAFKAGDIDMRMEYSSSQWARRYVGKNFD NGLLKQGLFPDGPPQMQGFLINLRRPMFQDVRVRHALALAFDYDWMNRMMFYGQYRRTNSFWEASPFGATGMPSEKELAL LEPFRKSLPPEVFGPMVKQPSTLPPNSLRGNLKQARALLEAAGWHYRDGALRDANGTPMTIEIIDDEPGMDRLILPYTQA LALLGIHAWLHEIDSALYQKRLDNFQYDMTTYIYAPVTIPGAELTRRFGSAAADEPGSENYPGLKSKAVDALIRDVLAAD TLDQLETATRALDRVLINLYILVPQYYLPNARIAYKSTYGHPKVIPASFNYEDWMIDYWYRKRPAAGAAHAAGASGAAGK E
Specific function: Unknown
COG id: COG4166
COG function: function code E; ABC-type oligopeptide transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI87082063, Length=579, Percent_Identity=34.8877374784111, Blast_Score=330, Evalue=1e-91,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 71809; Mature: 71809
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSVSMRRPRAAGHALAARLARVAAFACVAAAACFMQPGAALAVPAIAQYDAPKYPPNFT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHCCCCCCCCCCC HFDYADPDAPADGTLTFNNYNQLQSYDSLNPFLVRGAPAPDIQNLMFDTLMQRSWDELAS CCCCCCCCCCCCCEEEECCCHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH EYPLIADDVEIAPDRSSATFHINPAARFSNGDPITAADVKYSFDTLASPQASPIVNAQFE CCCEEECCCEECCCCCCCEEEECCHHCCCCCCCCEEEECEECHHHHCCCCCCCCCCHHHH VIRRATVVDRLTVRFDFKRPERSAPLIAGDLPVFSPKWGQRADGTRPPFDQIVEVPPIAS HHHHHHHHHEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCC GAYLIAERANDKQIVYERNPQYWAANLPTRRGMFRFQRITFKLYVDLYTMLEAFKAGDID CCEEEEECCCCCEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE MRMEYSSSQWARRYVGKNFDNGLLKQGLFPDGPPQMQGFLINLRRPMFQDVRVRHALALA EEEECCHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHE FDYDWMNRMMFYGQYRRTNSFWEASPFGATGMPSEKELALLEPFRKSLPPEVFGPMVKQP ECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCC STLPPNSLRGNLKQARALLEAAGWHYRDGALRDANGTPMTIEIIDDEPGMDRLILPYTQA CCCCCHHHHCCHHHHHHHHHHCCCEECCCCEECCCCCEEEEEEECCCCCCCCEEHHHHHH LALLGIHAWLHEIDSALYQKRLDNFQYDMTTYIYAPVTIPGAELTRRFGSAAADEPGSEN HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCHHHHHHHHCCCCCCCCCCCC YPGLKSKAVDALIRDVLAADTLDQLETATRALDRVLINLYILVPQYYLPNARIAYKSTYG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHCCCCCEEEEEECCC HPKVIPASFNYEDWMIDYWYRKRPAAGAAHAAGASGAAGKE CCEEEECCCCCCCCEEEHHHHCCCCCCCHHCCCCCCCCCCC >Mature Secondary Structure MNSVSMRRPRAAGHALAARLARVAAFACVAAAACFMQPGAALAVPAIAQYDAPKYPPNFT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHCCCCCCCCCCC HFDYADPDAPADGTLTFNNYNQLQSYDSLNPFLVRGAPAPDIQNLMFDTLMQRSWDELAS CCCCCCCCCCCCCEEEECCCHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH EYPLIADDVEIAPDRSSATFHINPAARFSNGDPITAADVKYSFDTLASPQASPIVNAQFE CCCEEECCCEECCCCCCCEEEECCHHCCCCCCCCEEEECEECHHHHCCCCCCCCCCHHHH VIRRATVVDRLTVRFDFKRPERSAPLIAGDLPVFSPKWGQRADGTRPPFDQIVEVPPIAS HHHHHHHHHEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCC GAYLIAERANDKQIVYERNPQYWAANLPTRRGMFRFQRITFKLYVDLYTMLEAFKAGDID CCEEEEECCCCCEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE MRMEYSSSQWARRYVGKNFDNGLLKQGLFPDGPPQMQGFLINLRRPMFQDVRVRHALALA EEEECCHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHE FDYDWMNRMMFYGQYRRTNSFWEASPFGATGMPSEKELALLEPFRKSLPPEVFGPMVKQP ECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCC STLPPNSLRGNLKQARALLEAAGWHYRDGALRDANGTPMTIEIIDDEPGMDRLILPYTQA CCCCCHHHHCCHHHHHHHHHHCCCEECCCCEECCCCCEEEEEEECCCCCCCCEEHHHHHH LALLGIHAWLHEIDSALYQKRLDNFQYDMTTYIYAPVTIPGAELTRRFGSAAADEPGSEN HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCHHHHHHHHCCCCCCCCCCCC YPGLKSKAVDALIRDVLAADTLDQLETATRALDRVLINLYILVPQYYLPNARIAYKSTYG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHCCCCCEEEEEECCC HPKVIPASFNYEDWMIDYWYRKRPAAGAAHAAGASGAAGKE CCEEEECCCCCCCCEEEHHHHCCCCCCCHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; oligopeptides [Periplasm]; H2O [C]
Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA