| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is ywrA [H]
Identifier: 238025526
GI number: 238025526
Start: 2756690
End: 2757226
Strand: Direct
Name: ywrA [H]
Synonym: bglu_2g22220
Alternate gene names: 238025526
Gene position: 2756690-2757226 (Clockwise)
Preceding gene: 238025525
Following gene: 238025527
Centisome position: 97.5
GC content: 72.63
Gene sequence:
>537_bases ATGTCGCGCACCCTTGCCGCACTCGCGGCCCTGTTCGCGCCGCTGTCGGTCGCCACGGTCGGCGGCGGCCAGACCATCAT CGCCGACATGCAGCGGCAGGTGGTGGACGTCCACCACTGGATGACGCACACGCAGTTCGTCAACGATTTCGCGATCGCGC GGCTCGCGCCCGGCCCCGGCTCGCTGCTCGCGACGCTGGTGGGCTTCCAGGTGGGCGGGGTGGCGGGCGCGCTGGTAGCC ACGCTCGCGCTGTTCGGCCCCACCGCGTTCCTGATGATCGCGATCACGCACATGACCTCGCGGCACCGCGACGCGCCGTG GCAGCGTGCGCTGCAGGCAGGCTTGCGGCCGGTGGCGGCCGGGCTGATCCTCGCGGCCGTCGATACGCTGATCCGCGGGC TCGACGGCGGCTGGATCGCGATCGCGACCGCGCTGGCCTCGACGGTGCTGGTCATGAAGACGCGCGTGAACGCGCTGCTG CTGATCGCGGCGGGCGCCGCCTGGTTCGTGCTGCTGCGGGCCTGCGGCGTGCTGTGA
Upstream 100 bases:
>100_bases GGACCGTGCTGACGGCCGGCGTGCTCAACGTCGCCTACGAATACTGGCTGCTCGGGCGCCGCCCCGCGCGCGCCGGCGCC GATCACTGAGCACGCCCGCC
Downstream 100 bases:
>100_bases GCGGCACGCGCCCCGGCCCGCGGCCCGCGCGGCGCGGGCCCGTGTCACCGCCAGCCCGCGTCACGTTACGTAACATTCGG GCCGCGCCTGCCTTCCTGCC
Product: chromate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MSRTLAALAALFAPLSVATVGGGQTIIADMQRQVVDVHHWMTHTQFVNDFAIARLAPGPGSLLATLVGFQVGGVAGALVA TLALFGPTAFLMIAITHMTSRHRDAPWQRALQAGLRPVAAGLILAAVDTLIRGLDGGWIAIATALASTVLVMKTRVNALL LIAAGAAWFVLLRACGVL
Sequences:
>Translated_178_residues MSRTLAALAALFAPLSVATVGGGQTIIADMQRQVVDVHHWMTHTQFVNDFAIARLAPGPGSLLATLVGFQVGGVAGALVA TLALFGPTAFLMIAITHMTSRHRDAPWQRALQAGLRPVAAGLILAAVDTLIRGLDGGWIAIATALASTVLVMKTRVNALL LIAAGAAWFVLLRACGVL >Mature_177_residues SRTLAALAALFAPLSVATVGGGQTIIADMQRQVVDVHHWMTHTQFVNDFAIARLAPGPGSLLATLVGFQVGGVAGALVAT LALFGPTAFLMIAITHMTSRHRDAPWQRALQAGLRPVAAGLILAAVDTLIRGLDGGWIAIATALASTVLVMKTRVNALLL IAAGAAWFVLLRACGVL
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 18454; Mature: 18323
Theoretical pI: Translated: 11.92; Mature: 11.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTLAALAALFAPLSVATVGGGQTIIADMQRQVVDVHHWMTHTQFVNDFAIARLAPGPG CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH SLLATLVGFQVGGVAGALVATLALFGPTAFLMIAITHMTSRHRDAPWQRALQAGLRPVAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHH GLILAAVDTLIRGLDGGWIAIATALASTVLVMKTRVNALLLIAAGAAWFVLLRACGVL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SRTLAALAALFAPLSVATVGGGQTIIADMQRQVVDVHHWMTHTQFVNDFAIARLAPGPG CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH SLLATLVGFQVGGVAGALVATLALFGPTAFLMIAITHMTSRHRDAPWQRALQAGLRPVAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHH GLILAAVDTLIRGLDGGWIAIATALASTVLVMKTRVNALLLIAAGAAWFVLLRACGVL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]