| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is pmi [H]
Identifier: 238025473
GI number: 238025473
Start: 2687723
End: 2688835
Strand: Direct
Name: pmi [H]
Synonym: bglu_2g21650
Alternate gene names: 238025473
Gene position: 2687723-2688835 (Clockwise)
Preceding gene: 238025469
Following gene: 238025474
Centisome position: 95.06
GC content: 73.5
Gene sequence:
>1113_bases ATGTCCGCTACCCGTCCCGCTTCCGTCCAGGCTGCCGAACTGCGCCGGCATTTCGCGGAAATCCTGCTGCCGCTGTGGCG AGGCCCCGGTTTCGACACGGCAATCGGACTGCCGTTCGAAGCGCTGAGCGCCGACACGCATGCGCCGCTGCCCGTCACGC GCTATCGGGCCATGGCCTGCGCGCGGCAATTGTTCGTGTTCGCCGACGCCGGCGAGCTGGCGCACGCGCAGACGCTGTTT GACGCATTGTGCCGCCATTTCCGCGATCCGCGGCACGGCGGCTGGTTCTACAGCGTCGATGCGCGCGGCGCGCCGCTCGA TCGCAGCAAGGATCTGTACACCCACGCGTTCGTCGTGTTCGCCTGCGCGGCGTACTTCGCCGCGTCCGGCAACGGCGACG CGCGCAAGGTGGCCGAGCACACCGCCGCGCTGATCGAGGACCGCTTCGCGCCGGCCGCCGGCGACGCCTGCCTCGACGCG GCGCGCGCCGAGGATTTCGCGCGCCTCGATGGCGGCGGCCCGCTGCAGAATCCGCTGATGCACCTGACCGAGGCATGGCT CGCGGCCGGCGCGGCGTTCGGCGACGCCGCGTTCGACGCCGCGCTGCTGCGCACGGCGCGCGCCGTCGAGCAGCGCTTCG TCGATCCGGCCACCGGCTGCGTCGCCGAGCTGGCGCTGGGCACGCCCGGCAACCGCGTCGAGCCGGGCCACCAGTTCGAG TGGTTCTATCTCGTCAGTGCGGCGGGCCGGCGGCTCGCGTCGACCGGCCTCGCCGACGCGCTGGAACGCGCCTACCGGTT CGCCGAGCGGCATGGCGTCGATCCGGCCACGGGCGGCGTGTGCGCGGCCGTCGACGGGCACGGCGCCTGCCTCGACGCGA CGCAGCGGATCTGGGCGCAGACCGAATATCTGCGTGCGCTCGCCACGCGCGGCGAGCACGCCGGCTCGCCCGCGCTCGCC ACGCAGATCGAGCGCTTCGCGGCGCGCTTCCTGCACCCGCGCGGCTGGTTCGAATGCAAGACCGCGGCCGGCGAGGTCTC GCGTGCCGACCTGCCGTCCACCACGCCGTATCATCTCGCGACCGCCTACGCCGCGCTGCCCGCCGGCGCCTGA
Upstream 100 bases:
>100_bases CTTCCTGTTATTGTGTCGGCGCATCGGCGCGGCCGGGCCGGACAGCCGGATCCGGCCGGCAGCACGCTGCCGCACTTTGT TCGATCCACGAGTTTTGACG
Downstream 100 bases:
>100_bases TCGCACCGCGCGGGCCGCGTTCGGCGGCCCCAGCGCGCGGCCCGCGCAATACCGCCTGCGATCCGCGCATCCGGCCCGCC CGCGGCGGCCGCCACGGCCG
Product: N-acylglucosamine 2-epimerase superfamily protein
Products: NA
Alternate protein names: Phosphohexomutase; Phosphomannose isomerase; PMI [H]
Number of amino acids: Translated: 370; Mature: 369
Protein sequence:
>370_residues MSATRPASVQAAELRRHFAEILLPLWRGPGFDTAIGLPFEALSADTHAPLPVTRYRAMACARQLFVFADAGELAHAQTLF DALCRHFRDPRHGGWFYSVDARGAPLDRSKDLYTHAFVVFACAAYFAASGNGDARKVAEHTAALIEDRFAPAAGDACLDA ARAEDFARLDGGGPLQNPLMHLTEAWLAAGAAFGDAAFDAALLRTARAVEQRFVDPATGCVAELALGTPGNRVEPGHQFE WFYLVSAAGRRLASTGLADALERAYRFAERHGVDPATGGVCAAVDGHGACLDATQRIWAQTEYLRALATRGEHAGSPALA TQIERFAARFLHPRGWFECKTAAGEVSRADLPSTTPYHLATAYAALPAGA
Sequences:
>Translated_370_residues MSATRPASVQAAELRRHFAEILLPLWRGPGFDTAIGLPFEALSADTHAPLPVTRYRAMACARQLFVFADAGELAHAQTLF DALCRHFRDPRHGGWFYSVDARGAPLDRSKDLYTHAFVVFACAAYFAASGNGDARKVAEHTAALIEDRFAPAAGDACLDA ARAEDFARLDGGGPLQNPLMHLTEAWLAAGAAFGDAAFDAALLRTARAVEQRFVDPATGCVAELALGTPGNRVEPGHQFE WFYLVSAAGRRLASTGLADALERAYRFAERHGVDPATGGVCAAVDGHGACLDATQRIWAQTEYLRALATRGEHAGSPALA TQIERFAARFLHPRGWFECKTAAGEVSRADLPSTTPYHLATAYAALPAGA >Mature_369_residues SATRPASVQAAELRRHFAEILLPLWRGPGFDTAIGLPFEALSADTHAPLPVTRYRAMACARQLFVFADAGELAHAQTLFD ALCRHFRDPRHGGWFYSVDARGAPLDRSKDLYTHAFVVFACAAYFAASGNGDARKVAEHTAALIEDRFAPAAGDACLDAA RAEDFARLDGGGPLQNPLMHLTEAWLAAGAAFGDAAFDAALLRTARAVEQRFVDPATGCVAELALGTPGNRVEPGHQFEW FYLVSAAGRRLASTGLADALERAYRFAERHGVDPATGGVCAAVDGHGACLDATQRIWAQTEYLRALATRGEHAGSPALAT QIERFAARFLHPRGWFECKTAAGEVSRADLPSTTPYHLATAYAALPAGA
Specific function: Unknown
COG id: COG2942
COG function: function code G; N-acyl-D-glucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N-acylglucosamine 2-epimerase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR010819 [H]
Pfam domain/function: PF07221 GlcNAc_2-epim [H]
EC number: =5.3.1.8 [H]
Molecular weight: Translated: 39548; Mature: 39416
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATRPASVQAAELRRHFAEILLPLWRGPGFDTAIGLPFEALSADTHAPLPVTRYRAMAC CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHH ARQLFVFADAGELAHAQTLFDALCRHFRDPRHGGWFYSVDARGAPLDRSKDLYTHAFVVF HHHHHHEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHH ACAAYFAASGNGDARKVAEHTAALIEDRFAPAAGDACLDAARAEDFARLDGGGPLQNPLM HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH HLTEAWLAAGAAFGDAAFDAALLRTARAVEQRFVDPATGCVAELALGTPGNRVEPGHQFE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEE WFYLVSAAGRRLASTGLADALERAYRFAERHGVDPATGGVCAAVDGHGACLDATQRIWAQ HEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHH TEYLRALATRGEHAGSPALATQIERFAARFLHPRGWFECKTAAGEVSRADLPSTTPYHLA HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEHHHCCCCCCCCCCCCCCCHHHH TAYAALPAGA HHHHHCCCCC >Mature Secondary Structure SATRPASVQAAELRRHFAEILLPLWRGPGFDTAIGLPFEALSADTHAPLPVTRYRAMAC CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHH ARQLFVFADAGELAHAQTLFDALCRHFRDPRHGGWFYSVDARGAPLDRSKDLYTHAFVVF HHHHHHEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHH ACAAYFAASGNGDARKVAEHTAALIEDRFAPAAGDACLDAARAEDFARLDGGGPLQNPLM HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH HLTEAWLAAGAAFGDAAFDAALLRTARAVEQRFVDPATGCVAELALGTPGNRVEPGHQFE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEE WFYLVSAAGRRLASTGLADALERAYRFAERHGVDPATGGVCAAVDGHGACLDATQRIWAQ HEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHH TEYLRALATRGEHAGSPALATQIERFAARFLHPRGWFECKTAAGEVSRADLPSTTPYHLA HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEHHHCCCCCCCCCCCCCCCHHHH TAYAALPAGA HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1452036; 11481430 [H]