| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is yjiJ [C]
Identifier: 238025464
GI number: 238025464
Start: 2673381
End: 2674607
Strand: Direct
Name: yjiJ [C]
Synonym: bglu_2g21560
Alternate gene names: 238025464
Gene position: 2673381-2674607 (Clockwise)
Preceding gene: 238025461
Following gene: 238025465
Centisome position: 94.55
GC content: 74.82
Gene sequence:
>1227_bases ATGCCACGCGAAGCGGAATGCTCCGCCCACGCCGGGCGCGACGCGCGCGGCGTGCAGGTCTGGCGCGCCACCCTGTCCGG ATTCTGCGCGAGCCTGGTGGGTATCGGGCTCGCGCGTTTCGCCTACACCCCGCTGCTGCCGGCGATCGTCGACGCGCACT GGTTCGCGCCGTCGCTGGCCGCCTATCTCGGCGCGGCCAATCTGGCCGGCTACCTGCTCGGCGCGCTGACGGGCCGCCAG GCCGCCGCGCGAGCCGGCGTCACGCTCACGCTGCGCGCGATGATGCTGCTCGCGACGGTGGCGTTCCTCGCCTGCGCGTA TCCGCTCTCGTTCGCCTGGTTCTTCGGCTGGCGCCTGCTCGCCGGGCTGGCCGGCGGCGCACTGATGGTGCTGGCCGCGC CCACCGTGCTGCAGCAGGTCCCCGCCTCGCGGCGCGGCCTGACGAGCGGCGTGATCTTCATGGGCGTGGGGGTGGGCGTG GTGGCCTCGGGCACGGTCGTGCCGCTGCTGCTGCAGCGCGGCCTGCCGGCCACCTGGGCCGGCCTCGGGCTGCTCTCGCT CGCGCTCACGGCGCTCGCCTGGCACGGCTGGCCGCACGAGGCCGCGCCGCAGGCCGCCCCCGCCGCGCCGGCACGGCATC GCCACCCAGGCGCGACGCGCCCGCTGCGCGCGCTCTACGCCGAATACGCGCTGAACGCGGCCGGCTGGGTGCCGCACATG ATCTTCCTGGTCGACTACGTCACGCGCGGCCTCGGCCAGAGCCTGCAGGTGGGCGCCGCATACTGGGTGCTGTTCGGCAT CGGCGCCACGCTCGGGCCGGTGGTGGCGGGTGCGCTGGCCGACCGGATCGGCTTCGGCAACGCGCTGCGGCTCGCGTTCG TGCTCGAGATCGGCGGCGTGGCGATCCCGGCGCTCGGGCTCGGCGCCTCCTGGCTGATGCTGTCGAGCGTGGTGGTGGGC GCGTTCGTCACCGGCACCGTGCCGCTCGTGCTCGGCCGCCTGCACGAGCTGCTCGCGCACCATCCGGCGCGACGCGATCC GGCCTGGCGCACCGCCACGGCCGGCTTCGCGCTGTGCCAGGCGCTCGCCGCCTACGGGCTGTCCTACGTGTTCTCGCATC ATGGCGGCGATTACCGTCTGCTGTTCGCGATCGGCACGGCGTCGATGCTGCTGGCGCTGCTGATCGACCTGGCCGCCGGC TTGCCGCGGCGTGACGCGCAAGCCTGA
Upstream 100 bases:
>100_bases CTGTTTCAGATGGCTCCCATCTTGATAATTCAATTCTATGAATCAACGGCCGCGAGTAGGCTCGAGCCATCCAGGTTTCG AATCGAGCGAAGGAGGGACG
Downstream 100 bases:
>100_bases CGCACGCGCTGGGGCGCGCGCGGCCGCGAAACTTTTTTTTCCGGGTTGGCGAACGACTATTGACGTGCGATAAGCGGGTT TTCCCTTATTCGGAGCCCGA
Product: major facilitator superfamily transporter
Products: NA
Alternate protein names: Facilitator Family Transporter; Facilitator Superfamily Protein; Nitrite Extrusion Protein; Facilitator Superfamily Transporter; Transporter-Like Membrane Protein; Facilitator Superfamily Permease
Number of amino acids: Translated: 408; Mature: 407
Protein sequence:
>408_residues MPREAECSAHAGRDARGVQVWRATLSGFCASLVGIGLARFAYTPLLPAIVDAHWFAPSLAAYLGAANLAGYLLGALTGRQ AAARAGVTLTLRAMMLLATVAFLACAYPLSFAWFFGWRLLAGLAGGALMVLAAPTVLQQVPASRRGLTSGVIFMGVGVGV VASGTVVPLLLQRGLPATWAGLGLLSLALTALAWHGWPHEAAPQAAPAAPARHRHPGATRPLRALYAEYALNAAGWVPHM IFLVDYVTRGLGQSLQVGAAYWVLFGIGATLGPVVAGALADRIGFGNALRLAFVLEIGGVAIPALGLGASWLMLSSVVVG AFVTGTVPLVLGRLHELLAHHPARRDPAWRTATAGFALCQALAAYGLSYVFSHHGGDYRLLFAIGTASMLLALLIDLAAG LPRRDAQA
Sequences:
>Translated_408_residues MPREAECSAHAGRDARGVQVWRATLSGFCASLVGIGLARFAYTPLLPAIVDAHWFAPSLAAYLGAANLAGYLLGALTGRQ AAARAGVTLTLRAMMLLATVAFLACAYPLSFAWFFGWRLLAGLAGGALMVLAAPTVLQQVPASRRGLTSGVIFMGVGVGV VASGTVVPLLLQRGLPATWAGLGLLSLALTALAWHGWPHEAAPQAAPAAPARHRHPGATRPLRALYAEYALNAAGWVPHM IFLVDYVTRGLGQSLQVGAAYWVLFGIGATLGPVVAGALADRIGFGNALRLAFVLEIGGVAIPALGLGASWLMLSSVVVG AFVTGTVPLVLGRLHELLAHHPARRDPAWRTATAGFALCQALAAYGLSYVFSHHGGDYRLLFAIGTASMLLALLIDLAAG LPRRDAQA >Mature_407_residues PREAECSAHAGRDARGVQVWRATLSGFCASLVGIGLARFAYTPLLPAIVDAHWFAPSLAAYLGAANLAGYLLGALTGRQA AARAGVTLTLRAMMLLATVAFLACAYPLSFAWFFGWRLLAGLAGGALMVLAAPTVLQQVPASRRGLTSGVIFMGVGVGVV ASGTVVPLLLQRGLPATWAGLGLLSLALTALAWHGWPHEAAPQAAPAAPARHRHPGATRPLRALYAEYALNAAGWVPHMI FLVDYVTRGLGQSLQVGAAYWVLFGIGATLGPVVAGALADRIGFGNALRLAFVLEIGGVAIPALGLGASWLMLSSVVVGA FVTGTVPLVLGRLHELLAHHPARRDPAWRTATAGFALCQALAAYGLSYVFSHHGGDYRLLFAIGTASMLLALLIDLAAGL PRRDAQA
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42352; Mature: 42221
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPREAECSAHAGRDARGVQVWRATLSGFCASLVGIGLARFAYTPLLPAIVDAHWFAPSLA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYLGAANLAGYLLGALTGRQAAARAGVTLTLRAMMLLATVAFLACAYPLSFAWFFGWRLL HHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGLAGGALMVLAAPTVLQQVPASRRGLTSGVIFMGVGVGVVASGTVVPLLLQRGLPATWA HHHCCCHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHH GLGLLSLALTALAWHGWPHEAAPQAAPAAPARHRHPGATRPLRALYAEYALNAAGWVPHM HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH IFLVDYVTRGLGQSLQVGAAYWVLFGIGATLGPVVAGALADRIGFGNALRLAFVLEIGGV HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCH AIPALGLGASWLMLSSVVVGAFVTGTVPLVLGRLHELLAHHPARRDPAWRTATAGFALCQ HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH ALAAYGLSYVFSHHGGDYRLLFAIGTASMLLALLIDLAAGLPRRDAQA HHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure PREAECSAHAGRDARGVQVWRATLSGFCASLVGIGLARFAYTPLLPAIVDAHWFAPSLA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYLGAANLAGYLLGALTGRQAAARAGVTLTLRAMMLLATVAFLACAYPLSFAWFFGWRLL HHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGLAGGALMVLAAPTVLQQVPASRRGLTSGVIFMGVGVGVVASGTVVPLLLQRGLPATWA HHHCCCHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHH GLGLLSLALTALAWHGWPHEAAPQAAPAAPARHRHPGATRPLRALYAEYALNAAGWVPHM HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH IFLVDYVTRGLGQSLQVGAAYWVLFGIGATLGPVVAGALADRIGFGNALRLAFVLEIGGV HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCH AIPALGLGASWLMLSSVVVGAFVTGTVPLVLGRLHELLAHHPARRDPAWRTATAGFALCQ HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH ALAAYGLSYVFSHHGGDYRLLFAIGTASMLLALLIDLAAGLPRRDAQA HHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA