Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is yjiJ [C]

Identifier: 238025464

GI number: 238025464

Start: 2673381

End: 2674607

Strand: Direct

Name: yjiJ [C]

Synonym: bglu_2g21560

Alternate gene names: 238025464

Gene position: 2673381-2674607 (Clockwise)

Preceding gene: 238025461

Following gene: 238025465

Centisome position: 94.55

GC content: 74.82

Gene sequence:

>1227_bases
ATGCCACGCGAAGCGGAATGCTCCGCCCACGCCGGGCGCGACGCGCGCGGCGTGCAGGTCTGGCGCGCCACCCTGTCCGG
ATTCTGCGCGAGCCTGGTGGGTATCGGGCTCGCGCGTTTCGCCTACACCCCGCTGCTGCCGGCGATCGTCGACGCGCACT
GGTTCGCGCCGTCGCTGGCCGCCTATCTCGGCGCGGCCAATCTGGCCGGCTACCTGCTCGGCGCGCTGACGGGCCGCCAG
GCCGCCGCGCGAGCCGGCGTCACGCTCACGCTGCGCGCGATGATGCTGCTCGCGACGGTGGCGTTCCTCGCCTGCGCGTA
TCCGCTCTCGTTCGCCTGGTTCTTCGGCTGGCGCCTGCTCGCCGGGCTGGCCGGCGGCGCACTGATGGTGCTGGCCGCGC
CCACCGTGCTGCAGCAGGTCCCCGCCTCGCGGCGCGGCCTGACGAGCGGCGTGATCTTCATGGGCGTGGGGGTGGGCGTG
GTGGCCTCGGGCACGGTCGTGCCGCTGCTGCTGCAGCGCGGCCTGCCGGCCACCTGGGCCGGCCTCGGGCTGCTCTCGCT
CGCGCTCACGGCGCTCGCCTGGCACGGCTGGCCGCACGAGGCCGCGCCGCAGGCCGCCCCCGCCGCGCCGGCACGGCATC
GCCACCCAGGCGCGACGCGCCCGCTGCGCGCGCTCTACGCCGAATACGCGCTGAACGCGGCCGGCTGGGTGCCGCACATG
ATCTTCCTGGTCGACTACGTCACGCGCGGCCTCGGCCAGAGCCTGCAGGTGGGCGCCGCATACTGGGTGCTGTTCGGCAT
CGGCGCCACGCTCGGGCCGGTGGTGGCGGGTGCGCTGGCCGACCGGATCGGCTTCGGCAACGCGCTGCGGCTCGCGTTCG
TGCTCGAGATCGGCGGCGTGGCGATCCCGGCGCTCGGGCTCGGCGCCTCCTGGCTGATGCTGTCGAGCGTGGTGGTGGGC
GCGTTCGTCACCGGCACCGTGCCGCTCGTGCTCGGCCGCCTGCACGAGCTGCTCGCGCACCATCCGGCGCGACGCGATCC
GGCCTGGCGCACCGCCACGGCCGGCTTCGCGCTGTGCCAGGCGCTCGCCGCCTACGGGCTGTCCTACGTGTTCTCGCATC
ATGGCGGCGATTACCGTCTGCTGTTCGCGATCGGCACGGCGTCGATGCTGCTGGCGCTGCTGATCGACCTGGCCGCCGGC
TTGCCGCGGCGTGACGCGCAAGCCTGA

Upstream 100 bases:

>100_bases
CTGTTTCAGATGGCTCCCATCTTGATAATTCAATTCTATGAATCAACGGCCGCGAGTAGGCTCGAGCCATCCAGGTTTCG
AATCGAGCGAAGGAGGGACG

Downstream 100 bases:

>100_bases
CGCACGCGCTGGGGCGCGCGCGGCCGCGAAACTTTTTTTTCCGGGTTGGCGAACGACTATTGACGTGCGATAAGCGGGTT
TTCCCTTATTCGGAGCCCGA

Product: major facilitator superfamily transporter

Products: NA

Alternate protein names: Facilitator Family Transporter; Facilitator Superfamily Protein; Nitrite Extrusion Protein; Facilitator Superfamily Transporter; Transporter-Like Membrane Protein; Facilitator Superfamily Permease

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MPREAECSAHAGRDARGVQVWRATLSGFCASLVGIGLARFAYTPLLPAIVDAHWFAPSLAAYLGAANLAGYLLGALTGRQ
AAARAGVTLTLRAMMLLATVAFLACAYPLSFAWFFGWRLLAGLAGGALMVLAAPTVLQQVPASRRGLTSGVIFMGVGVGV
VASGTVVPLLLQRGLPATWAGLGLLSLALTALAWHGWPHEAAPQAAPAAPARHRHPGATRPLRALYAEYALNAAGWVPHM
IFLVDYVTRGLGQSLQVGAAYWVLFGIGATLGPVVAGALADRIGFGNALRLAFVLEIGGVAIPALGLGASWLMLSSVVVG
AFVTGTVPLVLGRLHELLAHHPARRDPAWRTATAGFALCQALAAYGLSYVFSHHGGDYRLLFAIGTASMLLALLIDLAAG
LPRRDAQA

Sequences:

>Translated_408_residues
MPREAECSAHAGRDARGVQVWRATLSGFCASLVGIGLARFAYTPLLPAIVDAHWFAPSLAAYLGAANLAGYLLGALTGRQ
AAARAGVTLTLRAMMLLATVAFLACAYPLSFAWFFGWRLLAGLAGGALMVLAAPTVLQQVPASRRGLTSGVIFMGVGVGV
VASGTVVPLLLQRGLPATWAGLGLLSLALTALAWHGWPHEAAPQAAPAAPARHRHPGATRPLRALYAEYALNAAGWVPHM
IFLVDYVTRGLGQSLQVGAAYWVLFGIGATLGPVVAGALADRIGFGNALRLAFVLEIGGVAIPALGLGASWLMLSSVVVG
AFVTGTVPLVLGRLHELLAHHPARRDPAWRTATAGFALCQALAAYGLSYVFSHHGGDYRLLFAIGTASMLLALLIDLAAG
LPRRDAQA
>Mature_407_residues
PREAECSAHAGRDARGVQVWRATLSGFCASLVGIGLARFAYTPLLPAIVDAHWFAPSLAAYLGAANLAGYLLGALTGRQA
AARAGVTLTLRAMMLLATVAFLACAYPLSFAWFFGWRLLAGLAGGALMVLAAPTVLQQVPASRRGLTSGVIFMGVGVGVV
ASGTVVPLLLQRGLPATWAGLGLLSLALTALAWHGWPHEAAPQAAPAAPARHRHPGATRPLRALYAEYALNAAGWVPHMI
FLVDYVTRGLGQSLQVGAAYWVLFGIGATLGPVVAGALADRIGFGNALRLAFVLEIGGVAIPALGLGASWLMLSSVVVGA
FVTGTVPLVLGRLHELLAHHPARRDPAWRTATAGFALCQALAAYGLSYVFSHHGGDYRLLFAIGTASMLLALLIDLAAGL
PRRDAQA

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42352; Mature: 42221

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PREAECSAHAGRDARGVQVWRATLSGFCASLVGIGLARFAYTPLLPAIVDAHWFAPSLA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYLGAANLAGYLLGALTGRQAAARAGVTLTLRAMMLLATVAFLACAYPLSFAWFFGWRLL
HHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGLAGGALMVLAAPTVLQQVPASRRGLTSGVIFMGVGVGVVASGTVVPLLLQRGLPATWA
HHHCCCHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHH
GLGLLSLALTALAWHGWPHEAAPQAAPAAPARHRHPGATRPLRALYAEYALNAAGWVPHM
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IFLVDYVTRGLGQSLQVGAAYWVLFGIGATLGPVVAGALADRIGFGNALRLAFVLEIGGV
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCH
AIPALGLGASWLMLSSVVVGAFVTGTVPLVLGRLHELLAHHPARRDPAWRTATAGFALCQ
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
ALAAYGLSYVFSHHGGDYRLLFAIGTASMLLALLIDLAAGLPRRDAQA
HHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA