| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is yhjQ [H]
Identifier: 238025438
GI number: 238025438
Start: 2636760
End: 2637551
Strand: Direct
Name: yhjQ [H]
Synonym: bglu_2g21280
Alternate gene names: 238025438
Gene position: 2636760-2637551 (Clockwise)
Preceding gene: 238025437
Following gene: 238025439
Centisome position: 93.26
GC content: 70.33
Gene sequence:
>792_bases ATGAAGGTCGTCAGCGTCGTATCGGCCAAGGGCGGCGTCGGCAAGACCACGATCGCCGCGAACCTCGCCTCGGTGCTGGC CGCGCAGGGCCGCCACGTGGTCGCCATCGATCTCGATCCGCAGAACTCGCTGCGCCTGTATTTCGGCGTGCCGCTCGACA GCGTCGACGGCCTGTCGCGCGCCGCCCTGGCCGGCGCGCTCTGGCAGAGCGCGATCGTGGACGGCAGCGACGGCGTCACG GTGCTCGCGTTCGGCGCGCTCGTCGAGGCGGAGCAGCACCTGTTCGAGCGCCGCCTCGACCAAGATCCCACCTGGCTCGC GCGCGGCATTGGCGAGCTGCACCTCGGCGAGGACGACATCGTCATCATCGACACCCCGCCCGGCTCCTCGGCCTATACGC GCGCGGCCCTGTCGGCCGCGCATTTCGCGGTCAACGTGGTGCTGGCCGATGCCGCGTCGTATGCGGCGATCCCGCAGATG CAGCGGATGATCGACGCCTATGCGGCGCCGCGCCCCGAATTCGTCGGCGAGGGCTACGTGGTGAACCAGATCGACCAGTC GCGCCAGCTGAACAAGGACGTGCTGCGCGTGCTGCGCGAGATGCTCGGCAGCCACATGTTCCCCGGCGTGATCCACGACG ACGACGGCGTGAGCGAATCGCTCGCCTGCAACACCACCATCGTCAACTACGATCCGCTCAGCCAGGTCTCGGCCGATCTG CGCGCCTGCGCCGCCTGGCTGCTCGACACGCTCGAGGCGCGGCGGCCGGCGGCGCGCGGGAGCGCGGCATGA
Upstream 100 bases:
>100_bases GCGGCACGGCGCCCTCGCCGCAGATCGCCGTGATGCCGCCGGCCGCGGCCCCGAAGGCGGCCGCGCGCCGTCCGTGGTTC CTGGGCGGGGCGGGCCGGTC
Downstream 100 bases:
>100_bases AGGCCGCCCGCGCGCCGCGCGACGGCCAGGCCGGGCCGGTGCAGCAGGGCGACGCCGCGGCCGCCACGCGCCTGCAGCGT TTCGTCGACGCGCCGTTCTG
Product: cellulose synthase operon protein YhjQ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MKVVSVVSAKGGVGKTTIAANLASVLAAQGRHVVAIDLDPQNSLRLYFGVPLDSVDGLSRAALAGALWQSAIVDGSDGVT VLAFGALVEAEQHLFERRLDQDPTWLARGIGELHLGEDDIVIIDTPPGSSAYTRAALSAAHFAVNVVLADAASYAAIPQM QRMIDAYAAPRPEFVGEGYVVNQIDQSRQLNKDVLRVLREMLGSHMFPGVIHDDDGVSESLACNTTIVNYDPLSQVSADL RACAAWLLDTLEARRPAARGSAA
Sequences:
>Translated_263_residues MKVVSVVSAKGGVGKTTIAANLASVLAAQGRHVVAIDLDPQNSLRLYFGVPLDSVDGLSRAALAGALWQSAIVDGSDGVT VLAFGALVEAEQHLFERRLDQDPTWLARGIGELHLGEDDIVIIDTPPGSSAYTRAALSAAHFAVNVVLADAASYAAIPQM QRMIDAYAAPRPEFVGEGYVVNQIDQSRQLNKDVLRVLREMLGSHMFPGVIHDDDGVSESLACNTTIVNYDPLSQVSADL RACAAWLLDTLEARRPAARGSAA >Mature_263_residues MKVVSVVSAKGGVGKTTIAANLASVLAAQGRHVVAIDLDPQNSLRLYFGVPLDSVDGLSRAALAGALWQSAIVDGSDGVT VLAFGALVEAEQHLFERRLDQDPTWLARGIGELHLGEDDIVIIDTPPGSSAYTRAALSAAHFAVNVVLADAASYAAIPQM QRMIDAYAAPRPEFVGEGYVVNQIDQSRQLNKDVLRVLREMLGSHMFPGVIHDDDGVSESLACNTTIVNYDPLSQVSADL RACAAWLLDTLEARRPAARGSAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017746 [H]
Pfam domain/function: PF06564 YhjQ [H]
EC number: NA
Molecular weight: Translated: 27872; Mature: 27872
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVVSVVSAKGGVGKTTIAANLASVLAAQGRHVVAIDLDPQNSLRLYFGVPLDSVDGLSR CCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEECCCCCCCHHHH AALAGALWQSAIVDGSDGVTVLAFGALVEAEQHLFERRLDQDPTWLARGIGELHLGEDDI HHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEECCCCCE VIIDTPPGSSAYTRAALSAAHFAVNVVLADAASYAAIPQMQRMIDAYAAPRPEFVGEGYV EEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEE VNQIDQSRQLNKDVLRVLREMLGSHMFPGVIHDDDGVSESLACNTTIVNYDPLSQVSADL ECCHHHHHHCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEECEEEECCCCHHHHHHHH RACAAWLLDTLEARRPAARGSAA HHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKVVSVVSAKGGVGKTTIAANLASVLAAQGRHVVAIDLDPQNSLRLYFGVPLDSVDGLSR CCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEECCCCCCCHHHH AALAGALWQSAIVDGSDGVTVLAFGALVEAEQHLFERRLDQDPTWLARGIGELHLGEDDI HHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEECCCCCE VIIDTPPGSSAYTRAALSAAHFAVNVVLADAASYAAIPQMQRMIDAYAAPRPEFVGEGYV EEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEE VNQIDQSRQLNKDVLRVLREMLGSHMFPGVIHDDDGVSESLACNTTIVNYDPLSQVSADL ECCHHHHHHCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEECEEEECCCCHHHHHHHH RACAAWLLDTLEARRPAARGSAA HHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]