| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is 238025387
Identifier: 238025387
GI number: 238025387
Start: 2561456
End: 2562403
Strand: Direct
Name: 238025387
Synonym: bglu_2g20690
Alternate gene names: NA
Gene position: 2561456-2562403 (Clockwise)
Preceding gene: 238025386
Following gene: 238025388
Centisome position: 90.6
GC content: 65.61
Gene sequence:
>948_bases ATGACACATCGTATTCGAAAGCTCGCCGCGGTGGCGCTGGCCACGGCCGCCTGCGGCACGGCCAGCGCGGCCGACCTGCC TTCGCTGAATCTCGGCTTCACGAGCTTTCTCGACGGCCTGCCGCCCGCCGGTTCCGGCTGGTATGCCACGCAGTACCTGG AGTACTACAGCGCGTCGCGCATCAACGACAATGCCGGCAATCGCGTGGCCCTGCCCTGGCAGTCGGTCGATGTCTTCGCG GGCCTGAGCCAGCTCGTGTATCAGGCACCCGTGAAAGTCGGCGGCTTCCATCCCGGGCTCGACGTCATTGTGCCGTGGGT GGCCGCCGCCCATACCGACGACGGCTTGAACAACATGGCGCTCAACGGGCGGGCGGGCTTCGGCGATCTCGTGATCGGGC CGTTCCTGCAGTCGGATCCGCTCATGGGCGCGTCCGGGCCGCGCTTCGCCCAGCGCGTCGAACTGCAGTTCATCGTGCCG ACCGGCGCCTACGATCCGTCGCGGGCGATCAATCCGGGCAGTCATTTCTGGTCGTTCGATCCGTATTGGGCCGCAACCGT CTGGCTGACGCCGAAGTGGACGTTCTCCTGGCGCCTTCACTATCTGTGGAATTCGAGCAACCACGAGCCCGCCACCGCGC TCGGCCCGGACGTGACCTCCACCCAGGCGGGCCAGGCCGTGCATGCCAACTTCGCGACCGAGTACGAGCTGCGCCCGGGG TTGCGAATCGGGCTGAACGGCTACTGGCTGCGCCAGATCACCGACATGAAGGCCAATGGCCAGGATGTGTCCGGCACGCG CGAAGGCGTATGGGCAATCGGTCCCGGCGCGATGGTCAGCTTTTCGCCGCAGGATCATCTGATGTTCAACGCGTATTTCG AGCGGGACGCACGGAATCGACCGCAAGGTACGCGCGCGATACTGCGCTACGTGCATCATTTCGACTGA
Upstream 100 bases:
>100_bases CGCTGGTGTTCCACGGCGGCCGGTATCAAGCGCTCGCCGAGCACCCGGCTGTAGCGAAGGCATAGCCATTCGTCGTCCAT CATCGTCCCACAGGCGCCCC
Downstream 100 bases:
>100_bases ACGCGCCGGTCGCTGCGATCTCCAGCTCCGATCGCATCGAACCCCCTCGACCGCGGGCGAGCGCCCGCGTTGCCATTCGG ACAGAGCGGCGCCCACTATC
Product: MetA-pathway-like protein
Products: NA
Alternate protein names: Meta-Pathway Phenol Degradation-Like Protein; Protein Involved In Meta-Pathway Of Phenol Degradation; Signal Peptide; Involved In Meta-Pathway Of Phenol Degradation Protein; Regulatory Protein Involved In In Phenol Degradation; Regulation Of Phenolics Degradation Protein; Protein Involved In Meta-Pathway Of Phenol Degradation-Like; Meta-Pathway Phenol Degradation Protein; MetA-Pathway Phenol Degradation-Like Protein; Secreted Protein; Lipoprotein
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MTHRIRKLAAVALATAACGTASAADLPSLNLGFTSFLDGLPPAGSGWYATQYLEYYSASRINDNAGNRVALPWQSVDVFA GLSQLVYQAPVKVGGFHPGLDVIVPWVAAAHTDDGLNNMALNGRAGFGDLVIGPFLQSDPLMGASGPRFAQRVELQFIVP TGAYDPSRAINPGSHFWSFDPYWAATVWLTPKWTFSWRLHYLWNSSNHEPATALGPDVTSTQAGQAVHANFATEYELRPG LRIGLNGYWLRQITDMKANGQDVSGTREGVWAIGPGAMVSFSPQDHLMFNAYFERDARNRPQGTRAILRYVHHFD
Sequences:
>Translated_315_residues MTHRIRKLAAVALATAACGTASAADLPSLNLGFTSFLDGLPPAGSGWYATQYLEYYSASRINDNAGNRVALPWQSVDVFA GLSQLVYQAPVKVGGFHPGLDVIVPWVAAAHTDDGLNNMALNGRAGFGDLVIGPFLQSDPLMGASGPRFAQRVELQFIVP TGAYDPSRAINPGSHFWSFDPYWAATVWLTPKWTFSWRLHYLWNSSNHEPATALGPDVTSTQAGQAVHANFATEYELRPG LRIGLNGYWLRQITDMKANGQDVSGTREGVWAIGPGAMVSFSPQDHLMFNAYFERDARNRPQGTRAILRYVHHFD >Mature_314_residues THRIRKLAAVALATAACGTASAADLPSLNLGFTSFLDGLPPAGSGWYATQYLEYYSASRINDNAGNRVALPWQSVDVFAG LSQLVYQAPVKVGGFHPGLDVIVPWVAAAHTDDGLNNMALNGRAGFGDLVIGPFLQSDPLMGASGPRFAQRVELQFIVPT GAYDPSRAINPGSHFWSFDPYWAATVWLTPKWTFSWRLHYLWNSSNHEPATALGPDVTSTQAGQAVHANFATEYELRPGL RIGLNGYWLRQITDMKANGQDVSGTREGVWAIGPGAMVSFSPQDHLMFNAYFERDARNRPQGTRAILRYVHHFD
Specific function: Unknown
COG id: COG4313
COG function: function code C; Protein involved in meta-pathway of phenol degradation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34469; Mature: 34338
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHRIRKLAAVALATAACGTASAADLPSLNLGFTSFLDGLPPAGSGWYATQYLEYYSASR CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHCC INDNAGNRVALPWQSVDVFAGLSQLVYQAPVKVGGFHPGLDVIVPWVAAAHTDDGLNNMA CCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEE LNGRAGFGDLVIGPFLQSDPLMGASGPRFAQRVELQFIVPTGAYDPSRAINPGSHFWSFD ECCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCC PYWAATVWLTPKWTFSWRLHYLWNSSNHEPATALGPDVTSTQAGQAVHANFATEYELRPG CCEEEEEEECCCEEEEEEEEEEECCCCCCCCHHCCCCCCCCCCCCEEECCCCEEEECCCC LRIGLNGYWLRQITDMKANGQDVSGTREGVWAIGPGAMVSFSPQDHLMFNAYFERDARNR CEECCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCEEEEEEECCCCCCC PQGTRAILRYVHHFD CHHHHHHHHHHHHCC >Mature Secondary Structure THRIRKLAAVALATAACGTASAADLPSLNLGFTSFLDGLPPAGSGWYATQYLEYYSASR CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHCC INDNAGNRVALPWQSVDVFAGLSQLVYQAPVKVGGFHPGLDVIVPWVAAAHTDDGLNNMA CCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEE LNGRAGFGDLVIGPFLQSDPLMGASGPRFAQRVELQFIVPTGAYDPSRAINPGSHFWSFD ECCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCC PYWAATVWLTPKWTFSWRLHYLWNSSNHEPATALGPDVTSTQAGQAVHANFATEYELRPG CCEEEEEEECCCEEEEEEEEEEECCCCCCCCHHCCCCCCCCCCCCEEECCCCEEEECCCC LRIGLNGYWLRQITDMKANGQDVSGTREGVWAIGPGAMVSFSPQDHLMFNAYFERDARNR CEECCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCEEEEEEECCCCCCC PQGTRAILRYVHHFD CHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA