| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is ybeT [C]
Identifier: 238025308
GI number: 238025308
Start: 2463465
End: 2464052
Strand: Direct
Name: ybeT [C]
Synonym: bglu_2g19820
Alternate gene names: 238025308
Gene position: 2463465-2464052 (Clockwise)
Preceding gene: 238025306
Following gene: 238025309
Centisome position: 87.13
GC content: 61.56
Gene sequence:
>588_bases ATGTATCGCCGCTTACTCGCATCGGGGATGGTGTTGCTGTTGGCCGCTTGTGCACAGAATCCGTCCGCCACCAGCAACAC GGTGCGGATCTGCGACGACAGCGGCTGTTCCGATCGCCCCAAGGACCAGGTTTCCTACCAGAAAACGGACGATGCGGCGG AACCGGAAGACCCCCGCATCACGGCGCTAAAGCAGACCGCGAAGACCCAGCCCAAGGCCGCCTACGATCTCGGCCTGCGC TATTTTCGCGGTGACGGCGTGCGTCAGGACAGCTATCAGGCGCTCAAGTGGATGCGAGATGCAGCCGAGCGCGGCGACCT GAATGCGCAGAAGGCGCTCGGGAGCTTCTACCTGTTCGGCCTCGAGGAAATGGGCTCCGACTCGCGCGAAGCGGAGAAGT GGCTGTCGATCGCGGTTGCCCGCGGCGACAAGGAGTCGAAGAATCTGCTCGAACTCGCGCGCAAGGCCAAGAAGGAAGAC GAAGAAGACTGGAAATGGCGCACGCAGTGGCGTGACGTCTATTACGGCTACTGGCACTCCGGCTATCCGTACTACGGCGT CTGGCAGCAGACGTACTGGTATTACTGA
Upstream 100 bases:
>100_bases GTGAAATGGGTTCGGCTGCGCCGCGCGCAACCGGGTACGAGGGCACTGCTTGGCATGGCTCGACGCATCGCGATGCCAAT GTAACTTGAGGAAGGTATCA
Downstream 100 bases:
>100_bases CCGGGGGTCGGCGCAACGGGGAAGGCAGCGAGGGACCACCATCGCATGGCACGCCAAGGGGGGCTTATGGAAGTTCGCAC GAGCACATAGGCCGAACAAC
Product: Sel1 repeat-containing protein
Products: NA
Alternate protein names: Sel1 Domain Protein Repeat-Containing Protein; Sel1 Domain-Containing Protein Repeat-Containing Protein; Sel1 Repeat-Containing Protein; TPR Repeat SEL1 Subfamily
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MYRRLLASGMVLLLAACAQNPSATSNTVRICDDSGCSDRPKDQVSYQKTDDAAEPEDPRITALKQTAKTQPKAAYDLGLR YFRGDGVRQDSYQALKWMRDAAERGDLNAQKALGSFYLFGLEEMGSDSREAEKWLSIAVARGDKESKNLLELARKAKKED EEDWKWRTQWRDVYYGYWHSGYPYYGVWQQTYWYY
Sequences:
>Translated_195_residues MYRRLLASGMVLLLAACAQNPSATSNTVRICDDSGCSDRPKDQVSYQKTDDAAEPEDPRITALKQTAKTQPKAAYDLGLR YFRGDGVRQDSYQALKWMRDAAERGDLNAQKALGSFYLFGLEEMGSDSREAEKWLSIAVARGDKESKNLLELARKAKKED EEDWKWRTQWRDVYYGYWHSGYPYYGVWQQTYWYY >Mature_195_residues MYRRLLASGMVLLLAACAQNPSATSNTVRICDDSGCSDRPKDQVSYQKTDDAAEPEDPRITALKQTAKTQPKAAYDLGLR YFRGDGVRQDSYQALKWMRDAAERGDLNAQKALGSFYLFGLEEMGSDSREAEKWLSIAVARGDKESKNLLELARKAKKED EEDWKWRTQWRDVYYGYWHSGYPYYGVWQQTYWYY
Specific function: Unknown
COG id: COG0790
COG function: function code R; FOG: TPR repeat, SEL1 subfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22592; Mature: 22592
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRRLLASGMVLLLAACAQNPSATSNTVRICDDSGCSDRPKDQVSYQKTDDAAEPEDPRI CHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHCCCCCCCCCCCCCCCHH TALKQTAKTQPKAAYDLGLRYFRGDGVRQDSYQALKWMRDAAERGDLNAQKALGSFYLFG HHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEC LEEMGSDSREAEKWLSIAVARGDKESKNLLELARKAKKEDEEDWKWRTQWRDVYYGYWHS HHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEECC GYPYYGVWQQTYWYY CCCEEEECCCCCCCC >Mature Secondary Structure MYRRLLASGMVLLLAACAQNPSATSNTVRICDDSGCSDRPKDQVSYQKTDDAAEPEDPRI CHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHCCCCCCCCCCCCCCCHH TALKQTAKTQPKAAYDLGLRYFRGDGVRQDSYQALKWMRDAAERGDLNAQKALGSFYLFG HHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEC LEEMGSDSREAEKWLSIAVARGDKESKNLLELARKAKKEDEEDWKWRTQWRDVYYGYWHS HHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEECC GYPYYGVWQQTYWYY CCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA