| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is regX3 [H]
Identifier: 238025135
GI number: 238025135
Start: 2249180
End: 2249581
Strand: Direct
Name: regX3 [H]
Synonym: bglu_2g18000
Alternate gene names: 238025135
Gene position: 2249180-2249581 (Clockwise)
Preceding gene: 238025134
Following gene: 238025137
Centisome position: 79.55
GC content: 61.19
Gene sequence:
>402_bases ATGGATTGCAAGTATCTGTACATCGACAACATAAAAATCAACTTCGTCCGCCGTTCGATCGACATCGACGGCGCACCGAT CGACATCACGCCGCGCGAATTCGACGTCGTCGAATTCCTGCTCGACAACATGAACAAGGTCGTGCCGCGCCACGCGATTC AGGAAGCCGTGTGGGGCCGCGAGCTCGGCGTGTCGTCGCGCACGCTCGACACGCACATCTCGCGGATCCGCTCGAAGCTC AAGCTCGACAACGACAAGAACATGCGCATCATCCCGATCTATTCGATCGGCTATCGCCTGGTGCTGTTCGGCGCGGCTAC CACGCACGTCGAGCCGCACGACCAGCCGAGCTCGCGCCGCATGCCGCAACCGGGCGCGCAGGTATCGCACGCGTTCCTCT GA
Upstream 100 bases:
>100_bases TCAGACCGACGACGATGCGCGGTCCCGCTCGGCATGGCCCGGATATTGCGTGGTATTAAGCGTTCCGCTTCGGGGCCACC AGACAATTGCGAGGACCATC
Downstream 100 bases:
>100_bases GCGCCGCTGCGCGCGAGCGGCCCGTCGCCGGAATCCGGCGGCGGGCCGGTTTCATTACTGTCCGTAGCGGTCGAGCAGCT TCGCGGTCACGCCGTTGGTC
Product: winged helix family two component response transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MDCKYLYIDNIKINFVRRSIDIDGAPIDITPREFDVVEFLLDNMNKVVPRHAIQEAVWGRELGVSSRTLDTHISRIRSKL KLDNDKNMRIIPIYSIGYRLVLFGAATTHVEPHDQPSSRRMPQPGAQVSHAFL
Sequences:
>Translated_133_residues MDCKYLYIDNIKINFVRRSIDIDGAPIDITPREFDVVEFLLDNMNKVVPRHAIQEAVWGRELGVSSRTLDTHISRIRSKL KLDNDKNMRIIPIYSIGYRLVLFGAATTHVEPHDQPSSRRMPQPGAQVSHAFL >Mature_133_residues MDCKYLYIDNIKINFVRRSIDIDGAPIDITPREFDVVEFLLDNMNKVVPRHAIQEAVWGRELGVSSRTLDTHISRIRSKL KLDNDKNMRIIPIYSIGYRLVLFGAATTHVEPHDQPSSRRMPQPGAQVSHAFL
Specific function: Part of the two-component regulatory system senX3/regX3. Once phosphorylated by senX3, activates the expression of several operons/genes involved in phosphate assimilation and metabolism, such as pstSCAB, phnDCE, and phoA [H]
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 15272; Mature: 15272
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDCKYLYIDNIKINFVRRSIDIDGAPIDITPREFDVVEFLLDNMNKVVPRHAIQEAVWGR CCCEEEEECCEEEEEEEEEECCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH ELGVSSRTLDTHISRIRSKLKLDNDKNMRIIPIYSIGYRLVLFGAATTHVEPHDQPSSRR HCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCC MPQPGAQVSHAFL CCCCCCCCCCCCC >Mature Secondary Structure MDCKYLYIDNIKINFVRRSIDIDGAPIDITPREFDVVEFLLDNMNKVVPRHAIQEAVWGR CCCEEEEECCEEEEEEEEEECCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH ELGVSSRTLDTHISRIRSKLKLDNDKNMRIIPIYSIGYRLVLFGAATTHVEPHDQPSSRR HCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCC MPQPGAQVSHAFL CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA