Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

Click here to switch to the map view.

The map label for this gene is 238025074

Identifier: 238025074

GI number: 238025074

Start: 2169373

End: 2169774

Strand: Direct

Name: 238025074

Synonym: bglu_2g17300

Alternate gene names: NA

Gene position: 2169373-2169774 (Clockwise)

Preceding gene: 339717978

Following gene: 238025076

Centisome position: 76.73

GC content: 71.14

Gene sequence:

>402_bases
ATGAAGCAATCGATCGCGGCGGCCTGCGCCGCCGTCCTCACGCTGACGGCCCTGCCCGCGCTGGCCGATGCGCCCGCCAT
CGCGGCGGCCGCGGGCGAGCCCTGCGCGATCGGCTACGTGACCGGCGTGGCGGGCGCCCCGCAGAGCCTGCGCGAGTATC
TGGCGAGCCGCGACCAGGACCGCTTCCGCTACCTGACCGGCAACCCGCTGCAGTGCAAGGTTTCCGACGAAGGGCGCACC
TCGGCCTGCGTCGGCGTGACGAGCCTGCGCCACGAGCGCGTCAGCGTCTATGACGACAGCGGCGCCACGACCACCTCCGT
GGTCGCGCGCATCGAACTCGACCAGGGCACCTTCCCCGTCATCGTCGACGTGCGTAAGCAGGACCTCAGCTGCGAGAAAT
GA

Upstream 100 bases:

>100_bases
TCTTGACCTGCTTTACGGCCTGCCGGCCCCTGCTCTGCGGGCGCCGGTCGCGCGGCCCGATTACAATGGCGCACTTCGAT
CCGACACCGGTATTGGCACC

Downstream 100 bases:

>100_bases
AGATCCGGCCATGAGCCTCCGGTGACATGCCGCCTGCCGTCAGGCGGCCGCCGCCGTCAATCCAGCTCCAGCGCCCGGCG
CACCGACACCGAGATCCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MKQSIAAACAAVLTLTALPALADAPAIAAAAGEPCAIGYVTGVAGAPQSLREYLASRDQDRFRYLTGNPLQCKVSDEGRT
SACVGVTSLRHERVSVYDDSGATTTSVVARIELDQGTFPVIVDVRKQDLSCEK

Sequences:

>Translated_133_residues
MKQSIAAACAAVLTLTALPALADAPAIAAAAGEPCAIGYVTGVAGAPQSLREYLASRDQDRFRYLTGNPLQCKVSDEGRT
SACVGVTSLRHERVSVYDDSGATTTSVVARIELDQGTFPVIVDVRKQDLSCEK
>Mature_133_residues
MKQSIAAACAAVLTLTALPALADAPAIAAAAGEPCAIGYVTGVAGAPQSLREYLASRDQDRFRYLTGNPLQCKVSDEGRT
SACVGVTSLRHERVSVYDDSGATTTSVVARIELDQGTFPVIVDVRKQDLSCEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13931; Mature: 13931

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQSIAAACAAVLTLTALPALADAPAIAAAAGEPCAIGYVTGVAGAPQSLREYLASRDQD
CCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEEECCCCCCCHHHHHHHHCCCCC
RFRYLTGNPLQCKVSDEGRTSACVGVTSLRHERVSVYDDSGATTTSVVARIELDQGTFPV
CEEEECCCCEEEEECCCCCCEEEEHHHHHCCCEEEEEECCCCCCEEEEEEEEECCCCCEE
IVDVRKQDLSCEK
EEEEECCCCCCCC
>Mature Secondary Structure
MKQSIAAACAAVLTLTALPALADAPAIAAAAGEPCAIGYVTGVAGAPQSLREYLASRDQD
CCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEEECCCCCCCHHHHHHHHCCCCC
RFRYLTGNPLQCKVSDEGRTSACVGVTSLRHERVSVYDDSGATTTSVVARIELDQGTFPV
CEEEECCCCEEEEECCCCCCEEEEHHHHHCCCEEEEEECCCCCCEEEEEEEEECCCCCEE
IVDVRKQDLSCEK
EEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA