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The map label for this gene is rhmA [H]

Identifier: 238024741

GI number: 238024741

Start: 1766088

End: 1766882

Strand: Reverse

Name: rhmA [H]

Synonym: bglu_2g13780

Alternate gene names: 238024741

Gene position: 1766882-1766088 (Counterclockwise)

Preceding gene: 238024744

Following gene: 238024740

Centisome position: 62.49

GC content: 73.71

Gene sequence:

>795_bases
ATGACTGCAAGCTCTCCCCATGGACTGAACCGCTTCAAGGCCGCGCTCACGGCGCGCCGGCGCCAGATCGGCTTCTGGGT
GTCGATGGCCGAGCCCTACCTGGCCGAGGTGACCGCCACGGGCGGCTTCGACTGGCTGCTGATCGACGGCGAGCACGCGC
CAAACGACGTGCGCAGCATCGTCGCGCAACTGCAGGCGGTGGCGCCGTACCGCGCCGAGGCCGTGGTGCGCCCGGTCGAG
GGCGACACCGCGCTGATCAAGCAGCTGCTCGACGCCGGCGCGCGCACGCTGCTGGTGCCGATGGTCGAGACGGCCGAGCA
GGCGCGCGGGCTCGTCTCGGCGGTCCGTTATCCGCCGCGCGGCGTGCGCGGCGTGGGCAGCGCGGTGGCGCGCGCCTCGC
GCTGGAACCTGCGCGCCGATTACCTCGACATCGCGGACGAGGAGGTCTGCCTGCTGGTGCAGGCCGAAAGCGCGGCCGCG
CTCGGCAATCTCGAGGCGATCTGCGCGGTGGACGGCGTGGACGGCGTGTTCATCGGGCCGGCGGACCTGGCCGCCTCGAT
GGGGCATCGCGGCGACCCCGGCCATGCGGACGTGCAGTTCGCGATCGAGGACGCGATCGCGCGCGTCGTGCGCTCGGGCA
AGGCGGCCGGCACGCTGACGGGCGACGCGGCGCTCGCGCGCCATTACCTCGCGCTCGGCTGCACCTTCGTGGCCGTCGGC
GTGGACGTGCTGCTCTATGCGAACGCCGTGCGTGCGGCGGCGGAGGCGTTCGGGGTGGGGCCGGCCACCGCCTGA

Upstream 100 bases:

>100_bases
GGCCGGCCGCCGCGTCCGGCGCGCGGATGCGATCATGGCGGCGTGCGCCGAGCGCCCCGGCGCCGGCACTTCAGACCGAC
TCCACGACGAGGACCGACCG

Downstream 100 bases:

>100_bases
GCGCGCGCGGCCGGTTGCCGGCGGCGGCGAGCGCCGCCCGCCTGTTACCGCCGTAACGGCGCGGATGCGGTGCCCGGCAA
GGCTCGCGCCGCGCCGGCGG

Product: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase

Products: NA

Alternate protein names: KDR aldolase; 2-dehydro-3-deoxyrhamnonate aldolase [H]

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MTASSPHGLNRFKAALTARRRQIGFWVSMAEPYLAEVTATGGFDWLLIDGEHAPNDVRSIVAQLQAVAPYRAEAVVRPVE
GDTALIKQLLDAGARTLLVPMVETAEQARGLVSAVRYPPRGVRGVGSAVARASRWNLRADYLDIADEEVCLLVQAESAAA
LGNLEAICAVDGVDGVFIGPADLAASMGHRGDPGHADVQFAIEDAIARVVRSGKAAGTLTGDAALARHYLALGCTFVAVG
VDVLLYANAVRAAAEAFGVGPATA

Sequences:

>Translated_264_residues
MTASSPHGLNRFKAALTARRRQIGFWVSMAEPYLAEVTATGGFDWLLIDGEHAPNDVRSIVAQLQAVAPYRAEAVVRPVE
GDTALIKQLLDAGARTLLVPMVETAEQARGLVSAVRYPPRGVRGVGSAVARASRWNLRADYLDIADEEVCLLVQAESAAA
LGNLEAICAVDGVDGVFIGPADLAASMGHRGDPGHADVQFAIEDAIARVVRSGKAAGTLTGDAALARHYLALGCTFVAVG
VDVLLYANAVRAAAEAFGVGPATA
>Mature_263_residues
TASSPHGLNRFKAALTARRRQIGFWVSMAEPYLAEVTATGGFDWLLIDGEHAPNDVRSIVAQLQAVAPYRAEAVVRPVEG
DTALIKQLLDAGARTLLVPMVETAEQARGLVSAVRYPPRGVRGVGSAVARASRWNLRADYLDIADEEVCLLVQAESAAAL
GNLEAICAVDGVDGVFIGPADLAASMGHRGDPGHADVQFAIEDAIARVVRSGKAAGTLTGDAALARHYLALGCTFVAVGV
DVLLYANAVRAAAEAFGVGPATA

Specific function: Catalyzes the reversible retro-aldol cleavage of 2-keto- 3-deoxy-L-rhamnonate (KDR) to pyruvate and lactaldehyde [H]

COG id: COG3836

COG function: function code G; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HpcH/HpaI aldolase family. KDR aldolase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788578, Length=251, Percent_Identity=54.5816733067729, Blast_Score=274, Evalue=4e-75,
Organism=Escherichia coli, GI1789514, Length=248, Percent_Identity=44.758064516129, Blast_Score=219, Evalue=2e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005000
- InterPro:   IPR015813 [H]

Pfam domain/function: PF03328 HpcH_HpaI [H]

EC number: 4.1.2.-

Molecular weight: Translated: 27498; Mature: 27366

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASSPHGLNRFKAALTARRRQIGFWVSMAEPYLAEVTATGGFDWLLIDGEHAPNDVRSI
CCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCHHEEEEECCCEEEEEECCCCCCHHHHHH
VAQLQAVAPYRAEAVVRPVEGDTALIKQLLDAGARTLLVPMVETAEQARGLVSAVRYPPR
HHHHHHHCCCCHHHEEECCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCC
GVRGVGSAVARASRWNLRADYLDIADEEVCLLVQAESAAALGNLEAICAVDGVDGVFIGP
CCHHHHHHHHHHHHCCCCCHHHCCCCCCEEEEEECCCHHHHCCCEEEEEECCCCEEEECH
ADLAASMGHRGDPGHADVQFAIEDAIARVVRSGKAAGTLTGDAALARHYLALGCTFVAVG
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VDVLLYANAVRAAAEAFGVGPATA
HHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TASSPHGLNRFKAALTARRRQIGFWVSMAEPYLAEVTATGGFDWLLIDGEHAPNDVRSI
CCCCCCCHHHHHHHHHHHHHHHEEEEECCCCHHEEEEECCCEEEEEECCCCCCHHHHHH
VAQLQAVAPYRAEAVVRPVEGDTALIKQLLDAGARTLLVPMVETAEQARGLVSAVRYPPR
HHHHHHHCCCCHHHEEECCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCC
GVRGVGSAVARASRWNLRADYLDIADEEVCLLVQAESAAALGNLEAICAVDGVDGVFIGP
CCHHHHHHHHHHHHCCCCCHHHCCCCCCEEEEEECCCHHHHCCCEEEEEECCCCEEEECH
ADLAASMGHRGDPGHADVQFAIEDAIARVVRSGKAAGTLTGDAALARHYLALGCTFVAVG
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VDVLLYANAVRAAAEAFGVGPATA
HHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA