| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024727
Identifier: 238024727
GI number: 238024727
Start: 1749354
End: 1750769
Strand: Reverse
Name: 238024727
Synonym: bglu_2g13640
Alternate gene names: NA
Gene position: 1750769-1749354 (Counterclockwise)
Preceding gene: 238024729
Following gene: 238024726
Centisome position: 61.92
GC content: 67.37
Gene sequence:
>1416_bases ATGAAGCCATTCGATGAAATGCTGCAATCCGGCGACTCGGTACGCGCCCCTTACGAGCGCCTCAAGCAATGGCTCGATAC GCAGGACCCTGCGAGCCTGGCACAAAAGGCCCACGACGCCGAAGGCGTGTTCCGGCGCACCGGCATCACGTTCGCCGTCT ACGGCGACGCGGAGGCCGCCGAGCGGCTGATCCCGTTCGACATCGTGCCGCGCATCATTTCCGGGCAGGAATGGACCCGC CTGTCCCAGGGCATCGAACAGCGCGTGATGGCGCTCAATGCGTTCCTCGACGACATCTACCACCGCCAGGAAATCGTGCG CGCCGGCATCGTGCCGAAGCACCTGATCGCGCACAACGAGGCGTTCCTGCCCGAGATGATCGGCTTCCGGCCGCCCGGCA ACGTCTATACGCACATCATCGGCGTGGACATCGTGCGTACCGCCGAGCACCAGTTCTACGTGCTGGAGGACAACGCGCGC ACGCCGTCGGGCGTGTCGTACATGCTGGAAAACCGCGAAACCATGATGCAACTGTTTCCCGAGCTGTTCCAGCGCGTCAA GGTGCGGCCCGTCGAGACCTACCCGCAGCTGCTGCGCCAGTCGCTGGCGGCGGTCTGTCCGCCGGGCGGCAACGCCGACA ACCCGACGGTGGCCGTGCTCACGCCCGGCATCCACAACTCCGCCTACTACGAGCACGCGTTCCTGGCCGACCAGATGGGC GTGCATCTGGTGGAGGGCAGCGACCTGCAGGTGATCGACGGGCGCGTGGCGATGCGCACCACCGAGGGCTTCCGGCCGAT CGACGTGCTGTACCGGCGCCTCGACGACGCATTCCTCGATCCGCTCACGTTCCGTCCCGATTCGGTGCTCGGCGTGGCCG GCATCATGGACGTCTATCGCGCCGGCAACATCACGATCGCCAACGCGCCCGGCACCGGCATCGCCGACGACAAGGCGATC TATTCCTACATGCCCGAGATCGTCGAGTTCTACACCGGCCGCAAGGCGCTGCTCGAGAACGTGCCGACCTGGCGCTGCGG CGAGGCCGACAGCCTCAAGTACGTGCTCGACCACCTGGAGGAGCTGGTGGTGAAGGAGGTGCACGGCTCGGGCGGCTACG GCATGCTGGTCGGCCCGGCCTCCACGCGCGCGGAGCGCGAGACCTTCTCGGCCAAGCTGCGCGCGCGGCCGGCCAACTAC ATCGCGCAGCCCACGCTCGCGCTATCCACCACGCCGATCCTGACCGAGAAGGGACTCGCGCCGCGCCACGTCGACCTGCG CCCGTTCGTGCTGGTCTCGGACCGGATCCGCATCACGCCGGGCGGGCTCACGCGCGTGGCGCTCAAGGAGGGCTCGCTCG TCGTCAATTCGAGCCAGGGCGGCGGAACCAAGGACACCTGGGTGCTGGCCGACTGA
Upstream 100 bases:
>100_bases GTCTCAGTCTGGCGCAAGGCACGGACCTTGCTGGATACTGTTTCACGCCGGTCCGGCATGGTGGATGCCGAACAGAAGAA GAGAGAGGGAGAGACCCTGA
Downstream 100 bases:
>100_bases GCCGTCCGGCTCACGCGGCGCACCTCACCCGGCGTGCGCGGCGGCCCTGCGGGGCGCCGCGCGCGAAAGCAACAACGATC GGAGTCAACGGGAAATGCTT
Product: carboxylate-amine ligase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 471; Mature: 471
Protein sequence:
>471_residues MKPFDEMLQSGDSVRAPYERLKQWLDTQDPASLAQKAHDAEGVFRRTGITFAVYGDAEAAERLIPFDIVPRIISGQEWTR LSQGIEQRVMALNAFLDDIYHRQEIVRAGIVPKHLIAHNEAFLPEMIGFRPPGNVYTHIIGVDIVRTAEHQFYVLEDNAR TPSGVSYMLENRETMMQLFPELFQRVKVRPVETYPQLLRQSLAAVCPPGGNADNPTVAVLTPGIHNSAYYEHAFLADQMG VHLVEGSDLQVIDGRVAMRTTEGFRPIDVLYRRLDDAFLDPLTFRPDSVLGVAGIMDVYRAGNITIANAPGTGIADDKAI YSYMPEIVEFYTGRKALLENVPTWRCGEADSLKYVLDHLEELVVKEVHGSGGYGMLVGPASTRAERETFSAKLRARPANY IAQPTLALSTTPILTEKGLAPRHVDLRPFVLVSDRIRITPGGLTRVALKEGSLVVNSSQGGGTKDTWVLAD
Sequences:
>Translated_471_residues MKPFDEMLQSGDSVRAPYERLKQWLDTQDPASLAQKAHDAEGVFRRTGITFAVYGDAEAAERLIPFDIVPRIISGQEWTR LSQGIEQRVMALNAFLDDIYHRQEIVRAGIVPKHLIAHNEAFLPEMIGFRPPGNVYTHIIGVDIVRTAEHQFYVLEDNAR TPSGVSYMLENRETMMQLFPELFQRVKVRPVETYPQLLRQSLAAVCPPGGNADNPTVAVLTPGIHNSAYYEHAFLADQMG VHLVEGSDLQVIDGRVAMRTTEGFRPIDVLYRRLDDAFLDPLTFRPDSVLGVAGIMDVYRAGNITIANAPGTGIADDKAI YSYMPEIVEFYTGRKALLENVPTWRCGEADSLKYVLDHLEELVVKEVHGSGGYGMLVGPASTRAERETFSAKLRARPANY IAQPTLALSTTPILTEKGLAPRHVDLRPFVLVSDRIRITPGGLTRVALKEGSLVVNSSQGGGTKDTWVLAD >Mature_471_residues MKPFDEMLQSGDSVRAPYERLKQWLDTQDPASLAQKAHDAEGVFRRTGITFAVYGDAEAAERLIPFDIVPRIISGQEWTR LSQGIEQRVMALNAFLDDIYHRQEIVRAGIVPKHLIAHNEAFLPEMIGFRPPGNVYTHIIGVDIVRTAEHQFYVLEDNAR TPSGVSYMLENRETMMQLFPELFQRVKVRPVETYPQLLRQSLAAVCPPGGNADNPTVAVLTPGIHNSAYYEHAFLADQMG VHLVEGSDLQVIDGRVAMRTTEGFRPIDVLYRRLDDAFLDPLTFRPDSVLGVAGIMDVYRAGNITIANAPGTGIADDKAI YSYMPEIVEFYTGRKALLENVPTWRCGEADSLKYVLDHLEELVVKEVHGSGGYGMLVGPASTRAERETFSAKLRARPANY IAQPTLALSTTPILTEKGLAPRHVDLRPFVLVSDRIRITPGGLTRVALKEGSLVVNSSQGGGTKDTWVLAD
Specific function: Unknown
COG id: COG2308
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis RV2411c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007297 - InterPro: IPR007302 - InterPro: IPR016450 [H]
Pfam domain/function: PF04169 DUF404; PF04174 DUF407 [H]
EC number: NA
Molecular weight: Translated: 52211; Mature: 52211
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPFDEMLQSGDSVRAPYERLKQWLDTQDPASLAQKAHDAEGVFRRTGITFAVYGDAEAA CCCHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHCCEEEEEECCHHHH ERLIPFDIVPRIISGQEWTRLSQGIEQRVMALNAFLDDIYHRQEIVRAGIVPKHLIAHNE HHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC AFLPEMIGFRPPGNVYTHIIGVDIVRTAEHQFYVLEDNARTPSGVSYMLENRETMMQLFP HHHHHHHCCCCCCCCEEEEEEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHH ELFQRVKVRPVETYPQLLRQSLAAVCPPGGNADNPTVAVLTPGIHNSAYYEHAFLADQMG HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCC VHLVEGSDLQVIDGRVAMRTTEGFRPIDVLYRRLDDAFLDPLTFRPDSVLGVAGIMDVYR EEEECCCCEEEECCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH AGNITIANAPGTGIADDKAIYSYMPEIVEFYTGRKALLENVPTWRCGEADSLKYVLDHLE CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHH ELVVKEVHGSGGYGMLVGPASTRAERETFSAKLRARPANYIAQPTLALSTTPILTEKGLA HHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCHHHCCCCEEECCCCCCCCCCCC PRHVDLRPFVLVSDRIRITPGGLTRVALKEGSLVVNSSQGGGTKDTWVLAD CCCCCCCCEEEEECEEEECCCCCEEEEEECCCEEEECCCCCCCCCCEEEEC >Mature Secondary Structure MKPFDEMLQSGDSVRAPYERLKQWLDTQDPASLAQKAHDAEGVFRRTGITFAVYGDAEAA CCCHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHCCEEEEEECCHHHH ERLIPFDIVPRIISGQEWTRLSQGIEQRVMALNAFLDDIYHRQEIVRAGIVPKHLIAHNE HHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC AFLPEMIGFRPPGNVYTHIIGVDIVRTAEHQFYVLEDNARTPSGVSYMLENRETMMQLFP HHHHHHHCCCCCCCCEEEEEEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHH ELFQRVKVRPVETYPQLLRQSLAAVCPPGGNADNPTVAVLTPGIHNSAYYEHAFLADQMG HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCC VHLVEGSDLQVIDGRVAMRTTEGFRPIDVLYRRLDDAFLDPLTFRPDSVLGVAGIMDVYR EEEECCCCEEEECCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH AGNITIANAPGTGIADDKAIYSYMPEIVEFYTGRKALLENVPTWRCGEADSLKYVLDHLE CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHH ELVVKEVHGSGGYGMLVGPASTRAERETFSAKLRARPANYIAQPTLALSTTPILTEKGLA HHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCHHHCCCCEEECCCCCCCCCCCC PRHVDLRPFVLVSDRIRITPGGLTRVALKEGSLVVNSSQGGGTKDTWVLAD CCCCCCCCEEEEECEEEECCCCCEEEEEECCCEEEECCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1368738; 8590279; 8905231 [H]