| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024720
Identifier: 238024720
GI number: 238024720
Start: 1738345
End: 1739226
Strand: Reverse
Name: 238024720
Synonym: bglu_2g13570
Alternate gene names: NA
Gene position: 1739226-1738345 (Counterclockwise)
Preceding gene: 238024721
Following gene: 238024716
Centisome position: 61.51
GC content: 71.32
Gene sequence:
>882_bases ATGAACAGGCATGGGGCGGGAGTCCAGGCATTCACGGTGAACGGCGAGCGCGGCAATGCCGCCTTCGTGTTCGCCACGCA GGCACACGAGCGCGTCGACATCGATGCCTGCATCGCACTATCGGCGCAGTTGCAAAGCGAGGTGGCGTGGCTGCGGCGCG ATGCGGGCGTGCCCGGCCTCGGCCTGCGCTTCTTCACGCCGGGCGGCGAGATCGCGTTCTGCGGCCATGGCGTGCTGGCG TCGGCCGCCTGGCTCGATGCATTCGACGGCGAGCAGGCGAGCCACGTGTTCGAGGTCAGCGGTGCGTTGGTGTCGGTCGA GCGCGATAGCGCGGGGCGCTGGTTCTATCTGCAGGAGGAAGGCGGCTCGGAGCCGGTCGATCTGTGGCTGCTCGACGACG CGTTGCGTGCGCTCGGCCTGACTCACACCGACGCGTTGCGCACCGGCGGCGCGAAGCTCGCGCGTACCGTGGGCGCGCCG CGCGAGAAGCTGCTGCTCGAATTGCCCGACCCGCTGCTGCTGGGCCGGATCGAGCTCGATCCGGCGCGTCGCGACGCGCT GTGCGAGCGGCTCGGGACGACCGGCATCTATGCGTTCGCCGTGAAAGACCGTGAGCAGCCGCGCCTGGCCGCGCGGCATT TCGCGATCCGGGTCGGCACCCAGGAGGACATGGCCACCGGCAGCGTCGCGCCGACCGTGGTGCGCCATGCGGGGCTGTCG GGCGAGAGCGGCGACGTCGTCATCGACCAGGGCGGCCCCGGGTGCAACAACGCGCGGCTGTTCGTGTCCGCCGCGATGTT CGGCACCGCGCGGCGCGTGGCCGGGGAATGCGTGATCGGACCGCAGGCGCCGCTGGTCGGCATCGTCAGCACGGCGCCCT GA
Upstream 100 bases:
>100_bases GATCCGGACGTATCACGAGCGCGCCGCGTCATGGCGCGCGCTCCCGGTCGCGTCGTCGCTGCTGGCCGGGCAGCATCACA GGCACAGGAGTCATAGGCGC
Downstream 100 bases:
>100_bases GGCGGCGCGCGGCACGCCGCGCCGCCCCCCCGGTGGCGGCGCGAAGGCGGTGCGCGCCGGAGCGTGCGCGCAATCCGCGA ATCCCGTTGGCCGTTATTCG
Product: phenazine biosynthesis PhzC/PhzF protein
Products: NA
Alternate protein names: Phenazine Biosynthesis PhzC/PhzF Protein
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MNRHGAGVQAFTVNGERGNAAFVFATQAHERVDIDACIALSAQLQSEVAWLRRDAGVPGLGLRFFTPGGEIAFCGHGVLA SAAWLDAFDGEQASHVFEVSGALVSVERDSAGRWFYLQEEGGSEPVDLWLLDDALRALGLTHTDALRTGGAKLARTVGAP REKLLLELPDPLLLGRIELDPARRDALCERLGTTGIYAFAVKDREQPRLAARHFAIRVGTQEDMATGSVAPTVVRHAGLS GESGDVVIDQGGPGCNNARLFVSAAMFGTARRVAGECVIGPQAPLVGIVSTAP
Sequences:
>Translated_293_residues MNRHGAGVQAFTVNGERGNAAFVFATQAHERVDIDACIALSAQLQSEVAWLRRDAGVPGLGLRFFTPGGEIAFCGHGVLA SAAWLDAFDGEQASHVFEVSGALVSVERDSAGRWFYLQEEGGSEPVDLWLLDDALRALGLTHTDALRTGGAKLARTVGAP REKLLLELPDPLLLGRIELDPARRDALCERLGTTGIYAFAVKDREQPRLAARHFAIRVGTQEDMATGSVAPTVVRHAGLS GESGDVVIDQGGPGCNNARLFVSAAMFGTARRVAGECVIGPQAPLVGIVSTAP >Mature_293_residues MNRHGAGVQAFTVNGERGNAAFVFATQAHERVDIDACIALSAQLQSEVAWLRRDAGVPGLGLRFFTPGGEIAFCGHGVLA SAAWLDAFDGEQASHVFEVSGALVSVERDSAGRWFYLQEEGGSEPVDLWLLDDALRALGLTHTDALRTGGAKLARTVGAP REKLLLELPDPLLLGRIELDPARRDALCERLGTTGIYAFAVKDREQPRLAARHFAIRVGTQEDMATGSVAPTVVRHAGLS GESGDVVIDQGGPGCNNARLFVSAAMFGTARRVAGECVIGPQAPLVGIVSTAP
Specific function: Unknown
COG id: COG0384
COG function: function code R; Predicted epimerase, PhzC/PhzF homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30934; Mature: 30934
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRHGAGVQAFTVNGERGNAAFVFATQAHERVDIDACIALSAQLQSEVAWLRRDAGVPGL CCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC GLRFFTPGGEIAFCGHGVLASAAWLDAFDGEQASHVFEVSGALVSVERDSAGRWFYLQEE CEEEECCCCCEEEECCCHHHHHHHHHCCCCCCCCEEEEECCEEEEEEECCCCCEEEEECC GGSEPVDLWLLDDALRALGLTHTDALRTGGAKLARTVGAPREKLLLELPDPLLLGRIELD CCCCCEEEEEEHHHHHHHCCCCHHHHHCCCHHHHHHHCCCHHHEEEECCCCEEEEEEEEC PARRDALCERLGTTGIYAFAVKDREQPRLAARHFAIRVGTQEDMATGSVAPTVVRHAGLS HHHHHHHHHHHCCCCEEEEEECCCCCCHHHEEEEEEEECCHHHCCCCCCCHHHHHHCCCC GESGDVVIDQGGPGCNNARLFVSAAMFGTARRVAGECVIGPQAPLVGIVSTAP CCCCCEEEECCCCCCCCCEEEEEEHHHHHHHHHCCCEEECCCCCEEEEEECCC >Mature Secondary Structure MNRHGAGVQAFTVNGERGNAAFVFATQAHERVDIDACIALSAQLQSEVAWLRRDAGVPGL CCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC GLRFFTPGGEIAFCGHGVLASAAWLDAFDGEQASHVFEVSGALVSVERDSAGRWFYLQEE CEEEECCCCCEEEECCCHHHHHHHHHCCCCCCCCEEEEECCEEEEEEECCCCCEEEEECC GGSEPVDLWLLDDALRALGLTHTDALRTGGAKLARTVGAPREKLLLELPDPLLLGRIELD CCCCCEEEEEEHHHHHHHCCCCHHHHHCCCHHHHHHHCCCHHHEEEECCCCEEEEEEEEC PARRDALCERLGTTGIYAFAVKDREQPRLAARHFAIRVGTQEDMATGSVAPTVVRHAGLS HHHHHHHHHHHCCCCEEEEEECCCCCCHHHEEEEEEEECCHHHCCCCCCCHHHHHHCCCC GESGDVVIDQGGPGCNNARLFVSAAMFGTARRVAGECVIGPQAPLVGIVSTAP CCCCCEEEECCCCCCCCCEEEEEEHHHHHHHHHCCCEEECCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA