Click here to switch to the map view.

The map label for this gene is rhsE [H]

Identifier: 238024685

GI number: 238024685

Start: 1691094

End: 1692131

Strand: Reverse

Name: rhsE [H]

Synonym: bglu_2g13170

Alternate gene names: 238024685

Gene position: 1692131-1691094 (Counterclockwise)

Preceding gene: 238024686

Following gene: 238024684

Centisome position: 59.85

GC content: 59.73

Gene sequence:

>1038_bases
TTGGCTGACGGCCCAGCAGGCCGTCGCGGCGCCTGTCGTGTAAACCGCAAGGTATATGACGCGTTCGGCCGACGCATCGC
GAAGGAGGTGAACGGCGCGCGAACCGTCTACGGATGGGATGGGGATACGCTGGCCTACGAGTCAGCCGACGAGCACAGCA
CGCATTACCTGTACGAGCTCGAGACGTTTGTGCCGATGGCGCAATACGCTGGCGCACCGGTGAACGGCATCGAGACGCCG
GCGGCCGCGAGCACCGACCGCTACACGCCGGAGGACGATCCGCTGCAGCGGGTGCCGGCTGCGGCTGCGGCGGCGCACCT
GGTGTTCTATCACTGCGATCAGATCGGCACGCCGCTGATGATGACGGATGAGGCGGGCGAACTGGTGTGGGAGGCGAGCT
ACCGTGCGTGGGGCGAGGCGCAGGAGGTGATCGAGCGGGCGTCGGCCGCGGCCGGCATCGACGTCGTGCGGAATCCGCTG
CGGTTTCAGGGGCAGCAGTTCGATGACGAGACGGGGCAGCACTACAATCGGTATCGGTATTACGATCCGGGCAGCAGTCG
GTTCGTTAATAAGGACCCGATTGGGCTGACAGGCGGCATCAACATCTATCAATACGCGCCGAATCCGATAAGCTGGATTG
ACCCGCTAGGGTTGCAGCGCACGCTTACTGGTACGACGAAGGGCGGGATGTCTCGGTGTAGCAGTGGCTGGCGTGACCGC
TATGGTCCGGCCTCCATGCGCGAGCATCATTTGATCCCTCAGGCCATGATGAACAACGATAACTTCATGGCCCAAATGAA
AAACGCAGGTGTCAGTGATCCTGAGGACTATATCCATCGGCAAATCGCTCAAATATCGAACGCGCAACATATCGATGTGC
ACGAAGGTGGTTGGAACAAGGACTGGCAAAGCTGGTACCAAAACAACCCGAACTTTACGCGTAAGGATTTGGAGGCACAG
ACCAAGAGCATGATGAAGGACTACAACATCCCGCGTTCATCAAGGAACTTTGCAGAGCGATATGGTTCAGGCTGCTAA

Upstream 100 bases:

>100_bases
TGTTGCCGCCGAGGCTGCGGCGCTGCGTTGGCCGGCTGCGGTTGCAGCGAGAAGTTAGCCAACTGAGCCTCCTTGTGCTC
GCGAAGCGTCTGCGGAGCGC

Downstream 100 bases:

>100_bases
CCCAAAGGAGGCCAAAATGGCAGCTCGTCAACAATTTCAGAAGGCTTTGATGCTTCTCGACCGAGGAGCTATAGAGCGCG
GCGAAGCCGTGTTGCACCAA

Product: Rhs family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MADGPAGRRGACRVNRKVYDAFGRRIAKEVNGARTVYGWDGDTLAYESADEHSTHYLYELETFVPMAQYAGAPVNGIETP
AAASTDRYTPEDDPLQRVPAAAAAAHLVFYHCDQIGTPLMMTDEAGELVWEASYRAWGEAQEVIERASAAAGIDVVRNPL
RFQGQQFDDETGQHYNRYRYYDPGSSRFVNKDPIGLTGGINIYQYAPNPISWIDPLGLQRTLTGTTKGGMSRCSSGWRDR
YGPASMREHHLIPQAMMNNDNFMAQMKNAGVSDPEDYIHRQIAQISNAQHIDVHEGGWNKDWQSWYQNNPNFTRKDLEAQ
TKSMMKDYNIPRSSRNFAERYGSGC

Sequences:

>Translated_345_residues
MADGPAGRRGACRVNRKVYDAFGRRIAKEVNGARTVYGWDGDTLAYESADEHSTHYLYELETFVPMAQYAGAPVNGIETP
AAASTDRYTPEDDPLQRVPAAAAAAHLVFYHCDQIGTPLMMTDEAGELVWEASYRAWGEAQEVIERASAAAGIDVVRNPL
RFQGQQFDDETGQHYNRYRYYDPGSSRFVNKDPIGLTGGINIYQYAPNPISWIDPLGLQRTLTGTTKGGMSRCSSGWRDR
YGPASMREHHLIPQAMMNNDNFMAQMKNAGVSDPEDYIHRQIAQISNAQHIDVHEGGWNKDWQSWYQNNPNFTRKDLEAQ
TKSMMKDYNIPRSSRNFAERYGSGC
>Mature_344_residues
ADGPAGRRGACRVNRKVYDAFGRRIAKEVNGARTVYGWDGDTLAYESADEHSTHYLYELETFVPMAQYAGAPVNGIETPA
AASTDRYTPEDDPLQRVPAAAAAAHLVFYHCDQIGTPLMMTDEAGELVWEASYRAWGEAQEVIERASAAAGIDVVRNPLR
FQGQQFDDETGQHYNRYRYYDPGSSRFVNKDPIGLTGGINIYQYAPNPISWIDPLGLQRTLTGTTKGGMSRCSSGWRDRY
GPASMREHHLIPQAMMNNDNFMAQMKNAGVSDPEDYIHRQIAQISNAQHIDVHEGGWNKDWQSWYQNNPNFTRKDLEAQT
KSMMKDYNIPRSSRNFAERYGSGC

Specific function: Rhs elements have a nonessential function. They may play an important role in the natural ecology of the cell [H]

COG id: COG3209

COG function: function code M; Rhs family protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RHS family [H]

Homologues:

Organism=Escherichia coli, GI1786706, Length=288, Percent_Identity=30.9027777777778, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1786917, Length=266, Percent_Identity=30.4511278195489, Blast_Score=112, Evalue=5e-26,
Organism=Escherichia coli, GI48994942, Length=265, Percent_Identity=30.5660377358491, Blast_Score=109, Evalue=3e-25,
Organism=Escherichia coli, GI1790020, Length=266, Percent_Identity=29.6992481203008, Blast_Score=108, Evalue=6e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001826
- InterPro:   IPR022385
- InterPro:   IPR006530 [H]

Pfam domain/function: PF03527 RHS; PF05593 RHS_repeat [H]

EC number: NA

Molecular weight: Translated: 38800; Mature: 38669

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADGPAGRRGACRVNRKVYDAFGRRIAKEVNGARTVYGWDGDTLAYESADEHSTHYLYEL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCCCCCEEEEEH
ETFVPMAQYAGAPVNGIETPAAASTDRYTPEDDPLQRVPAAAAAAHLVFYHCDQIGTPLM
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEE
MTDEAGELVWEASYRAWGEAQEVIERASAAAGIDVVRNPLRFQGQQFDDETGQHYNRYRY
EECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHCCCEE
YDPGSSRFVNKDPIGLTGGINIYQYAPNPISWIDPLGLQRTLTGTTKGGMSRCSSGWRDR
ECCCCCCCCCCCCCCEECCCEEEEECCCCCCCCCCCCCCEEECCCCHHHHHHHHCCHHHC
YGPASMREHHLIPQAMMNNDNFMAQMKNAGVSDPEDYIHRQIAQISNAQHIDVHEGGWNK
CCCCHHHHHHCCHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCH
DWQSWYQNNPNFTRKDLEAQTKSMMKDYNIPRSSRNFAERYGSGC
HHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCC
>Mature Secondary Structure 
ADGPAGRRGACRVNRKVYDAFGRRIAKEVNGARTVYGWDGDTLAYESADEHSTHYLYEL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCCCCCEEEEEH
ETFVPMAQYAGAPVNGIETPAAASTDRYTPEDDPLQRVPAAAAAAHLVFYHCDQIGTPLM
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEE
MTDEAGELVWEASYRAWGEAQEVIERASAAAGIDVVRNPLRFQGQQFDDETGQHYNRYRY
EECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHCCCEE
YDPGSSRFVNKDPIGLTGGINIYQYAPNPISWIDPLGLQRTLTGTTKGGMSRCSSGWRDR
ECCCCCCCCCCCCCCEECCCEEEEECCCCCCCCCCCCCCEEECCCCHHHHHHHHCCHHHC
YGPASMREHHLIPQAMMNNDNFMAQMKNAGVSDPEDYIHRQIAQISNAQHIDVHEGGWNK
CCCCHHHHHHCCHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCH
DWQSWYQNNPNFTRKDLEAQTKSMMKDYNIPRSSRNFAERYGSGC
HHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 1766878; 7934896 [H]