| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is paaC [H]
Identifier: 238024546
GI number: 238024546
Start: 1464049
End: 1464819
Strand: Reverse
Name: paaC [H]
Synonym: bglu_2g11520
Alternate gene names: 238024546
Gene position: 1464819-1464049 (Counterclockwise)
Preceding gene: 238024547
Following gene: 238024545
Centisome position: 51.81
GC content: 67.57
Gene sequence:
>771_bases GTGAAGACCCACAACGGATTCGACATGGGGCTGGCCGACTACGTGCTGCGCCTCGGCGACAACTGCCTGATCCTGTCGCA GCGACTGTGCGCCTGGTGCGGCCACGGCCCGACGCTCGAGGAGGACCTCGCGCTGTCCAACGTCGCGCTCGACTATCTGG GCCAGGCGCGGCTCTGGCTCGGCTATGCCGGCAGCCTGCACCCGGTGGCGTGCGGCGAGGACGAGCTGGCCTTCCTGCGC GAGGCGCACGAGTTCCGCAACGTGCTGCTGGTGGAGCAGCCGAACCAGGACTTCGCCGACCTGCAGATGCGGCTGTTCCT GTTCGACAGCTGGTACGCGCTGGTGCTGGCCGCACTCGCGCATTCGCAGGACGCGCAGATCGCGGCTATCGCGGCGAAGT CGGCCAAGGAGAACGCCTATCACCTGCGGCGCAGCAGCCACTGGATCGTGCGGCTGGCGGGCGGCACCGAGCTGAGCCGC GCCAAGCTGCTGCGCGCGCTCGACGGGTGCTGGGAATTCACCGGCGAGCTGTTCGAGATGGACGAACTCGACCGGGCGAT GCTCGAGTGCGGCATCGGCTGCAATCTTACGGATCTGCAAATCAAGTGGCAGTCCTACGTGAAGGAGGTGTTCGGCGAGG CCGGCATCTCGCTGCCCGCGGGTGCGTTGCGCAAGCAGTCGGGCAAGCGCGGCGAGCACTCCGAGCACCTGGTCTGGCTG CTGATGGAGATGCAGTACCTGCAACGCGCGCATCCGGGGGCGCAATGGTGA
Upstream 100 bases:
>100_bases CGAGCGATCCGGACGACAAGGCCGCCTGGTTCGCCTCGTCCCAGGACAAGGCGTACCGCCACGCCACGTTCTTTCAGGTA CCGGAAGGAGTGCAGAACCT
Downstream 100 bases:
>100_bases GCGTGCTCGACGCAGGCCAAGTCCGTCCCGACGTCGAACGGATCTGGGAATGGATCGCACGCGTGCCGGACCCGGAGATG CCGTTCATCTCGGTGGTCGA
Product: phenylacetate-CoA oxygenase subunit PaaI
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MKTHNGFDMGLADYVLRLGDNCLILSQRLCAWCGHGPTLEEDLALSNVALDYLGQARLWLGYAGSLHPVACGEDELAFLR EAHEFRNVLLVEQPNQDFADLQMRLFLFDSWYALVLAALAHSQDAQIAAIAAKSAKENAYHLRRSSHWIVRLAGGTELSR AKLLRALDGCWEFTGELFEMDELDRAMLECGIGCNLTDLQIKWQSYVKEVFGEAGISLPAGALRKQSGKRGEHSEHLVWL LMEMQYLQRAHPGAQW
Sequences:
>Translated_256_residues MKTHNGFDMGLADYVLRLGDNCLILSQRLCAWCGHGPTLEEDLALSNVALDYLGQARLWLGYAGSLHPVACGEDELAFLR EAHEFRNVLLVEQPNQDFADLQMRLFLFDSWYALVLAALAHSQDAQIAAIAAKSAKENAYHLRRSSHWIVRLAGGTELSR AKLLRALDGCWEFTGELFEMDELDRAMLECGIGCNLTDLQIKWQSYVKEVFGEAGISLPAGALRKQSGKRGEHSEHLVWL LMEMQYLQRAHPGAQW >Mature_256_residues MKTHNGFDMGLADYVLRLGDNCLILSQRLCAWCGHGPTLEEDLALSNVALDYLGQARLWLGYAGSLHPVACGEDELAFLR EAHEFRNVLLVEQPNQDFADLQMRLFLFDSWYALVLAALAHSQDAQIAAIAAKSAKENAYHLRRSSHWIVRLAGGTELSR AKLLRALDGCWEFTGELFEMDELDRAMLECGIGCNLTDLQIKWQSYVKEVFGEAGISLPAGALRKQSGKRGEHSEHLVWL LMEMQYLQRAHPGAQW
Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]
COG id: COG3396
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787656, Length=246, Percent_Identity=49.1869918699187, Blast_Score=235, Evalue=2e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR011882 - InterPro: IPR007814 [H]
Pfam domain/function: PF05138 PaaA_PaaC [H]
EC number: NA
Molecular weight: Translated: 28760; Mature: 28760
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTHNGFDMGLADYVLRLGDNCLILSQRLCAWCGHGPTLEEDLALSNVALDYLGQARLWL CCCCCCCCCCHHHHHHHHCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHEEE GYAGSLHPVACGEDELAFLREAHEFRNVLLVEQPNQDFADLQMRLFLFDSWYALVLAALA EECCCCCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH HSQDAQIAAIAAKSAKENAYHLRRSSHWIVRLAGGTELSRAKLLRALDGCWEFTGELFEM CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH DELDRAMLECGIGCNLTDLQIKWQSYVKEVFGEAGISLPAGALRKQSGKRGEHSEHLVWL HHHHHHHHHHCCCCCCCHHEEHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHH LMEMQYLQRAHPGAQW HHHHHHHHHCCCCCCC >Mature Secondary Structure MKTHNGFDMGLADYVLRLGDNCLILSQRLCAWCGHGPTLEEDLALSNVALDYLGQARLWL CCCCCCCCCCHHHHHHHHCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHEEE GYAGSLHPVACGEDELAFLREAHEFRNVLLVEQPNQDFADLQMRLFLFDSWYALVLAALA EECCCCCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH HSQDAQIAAIAAKSAKENAYHLRRSSHWIVRLAGGTELSRAKLLRALDGCWEFTGELFEM CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH DELDRAMLECGIGCNLTDLQIKWQSYVKEVFGEAGISLPAGALRKQSGKRGEHSEHLVWL HHHHHHHHHHCCCCCCCHHEEHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHH LMEMQYLQRAHPGAQW HHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]