| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024528
Identifier: 238024528
GI number: 238024528
Start: 1446747
End: 1447172
Strand: Reverse
Name: 238024528
Synonym: bglu_2g11340
Alternate gene names: NA
Gene position: 1447172-1446747 (Counterclockwise)
Preceding gene: 238024530
Following gene: 238024527
Centisome position: 51.19
GC content: 75.82
Gene sequence:
>426_bases ATGCGCTATGCGCTAGGCGCGCTGGCCAGCGTCGGCGCGATCGCGCTGCCGATCGAGCGCTCGCAGGCGGTGCTCACCGG CATGCTGGTCAGCTTCCTGTTCTACGCGGGCGCGGTGATCTGGGTGTTCCTCGCGCGCACCGCGCGGCGCGCCTGGATCG AGCTGCTGTGGATCGCGGCGGGCTTGCTGGCGCTGCTGCCGGTGCTCAACGCGCTGACCACCGACCGGCCGCTCTGGCGC AGCGTGGCCGACGGCGACTGGGTGTACGCGGGCTTCGATCTGATGATGTGGGCGTTCGCGGCGCTGCACGCGCTGCTGGC GATCGGCACCGGCCGCCATCGGGCGCGGCCGCGTCGGGCCGGCCGGGCCGGCGGCGCGGCGCACGTGCCGCCGGCGCTGC CTGGCCGGGGCGAGGGGCGGCGCTGA
Upstream 100 bases:
>100_bases CGCCGCGCGCGCGGCGCTTGCGGCATGAGCGCCCTGTCGGACCGCTGGCGGCGCCTCGGGCCGCTGCTGTCACAGATCGT CTGCGCGATCCTGGGCGGCT
Downstream 100 bases:
>100_bases GATGGGCCTGCTGAGCTTGACGGTATGCGTGGCCGCGTTCGCCTGCCTCGCGCTGGCGATGGAGCGGCATCAGCGGGCCG TGGCCGCGCGTGGCTGGGCG
Product: PepSY-associated TM helix protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MRYALGALASVGAIALPIERSQAVLTGMLVSFLFYAGAVIWVFLARTARRAWIELLWIAAGLLALLPVLNALTTDRPLWR SVADGDWVYAGFDLMMWAFAALHALLAIGTGRHRARPRRAGRAGGAAHVPPALPGRGEGRR
Sequences:
>Translated_141_residues MRYALGALASVGAIALPIERSQAVLTGMLVSFLFYAGAVIWVFLARTARRAWIELLWIAAGLLALLPVLNALTTDRPLWR SVADGDWVYAGFDLMMWAFAALHALLAIGTGRHRARPRRAGRAGGAAHVPPALPGRGEGRR >Mature_141_residues MRYALGALASVGAIALPIERSQAVLTGMLVSFLFYAGAVIWVFLARTARRAWIELLWIAAGLLALLPVLNALTTDRPLWR SVADGDWVYAGFDLMMWAFAALHALLAIGTGRHRARPRRAGRAGGAAHVPPALPGRGEGRR
Specific function: Unknown
COG id: COG3182
COG function: function code S; Uncharacterized iron-regulated membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15213; Mature: 15213
Theoretical pI: Translated: 12.16; Mature: 12.16
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYALGALASVGAIALPIERSQAVLTGMLVSFLFYAGAVIWVFLARTARRAWIELLWIAA CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLLALLPVLNALTTDRPLWRSVADGDWVYAGFDLMMWAFAALHALLAIGTGRHRARPRRA HHHHHHHHHHHHHCCCHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHC GRAGGAAHVPPALPGRGEGRR CCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRYALGALASVGAIALPIERSQAVLTGMLVSFLFYAGAVIWVFLARTARRAWIELLWIAA CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLLALLPVLNALTTDRPLWRSVADGDWVYAGFDLMMWAFAALHALLAIGTGRHRARPRRA HHHHHHHHHHHHHCCCHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHC GRAGGAAHVPPALPGRGEGRR CCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA