| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is yngE [H]
Identifier: 238024523
GI number: 238024523
Start: 1442307
End: 1443914
Strand: Reverse
Name: yngE [H]
Synonym: bglu_2g11290
Alternate gene names: 238024523
Gene position: 1443914-1442307 (Counterclockwise)
Preceding gene: 238024524
Following gene: 238024522
Centisome position: 51.07
GC content: 70.34
Gene sequence:
>1608_bases ATGCCGATCCTCGAATCGAAACTGAACCCCCGCTCCGACGAATTCCGCGCCAACGCGGCCGCGCTCGACGCGCTGGTGGC CGACCTGCGCGAGAAGATCGAGCGGCTCGCGCAGGGCGGCGGGCAGGCCGCGCGCGACAAGCACGTGGCGCGCGGCAAGC TGCTGCCGCGCGAGCGCATCGCGCTGCTGCTGGACCCGGGCTCGCCGTTCCTCGAACTCTCGCAGCTCGCCGCGTTCGGC ATGTACAACGACGACGCTCCTGGCGCCGGCATCATCACCGGCATCGGCCGGATCGCCGGGCGCGAGTGCATGATCGTCTG CAACGACGCCACCGTGAAGGGCGGCACCTATTACCCCGTCACCGTCAAGAAGCACGTGCGCGCGCAGGAGATCGCGGCCG AGAACCGGCTGCCCTGCGTCTACCTGGTCGATTCGGGCGGCGCGAACCTGCCGAACCAGGACGAGGTGTTCCCCGACCGC GACCACTTCGGCCGCATCTTCTACAACCAGGCCAACCTGTCGGCCGCCGGCATCGCGCAGATCGCGGTGGTGATGGGCTC GTGCACGGCCGGCGGCGCCTACGTGCCGGCGATGAGCGACGAATCGATCATCGTCAGGGAGCAGGGCACGATCTTCCTGG GCGGCCCGCCGCTGGTGAAGGCGGCCATCGGCGAGGAGGTCAGCGCCGAGGACCTGGGCGGCGGCGATGTCCACACCCGG CTGTCGGGCGTGGCCGACCATCTCGCCCGGAACGACGCGCACGCGCTCGCGATCGCGCGCTCGATCGTCGCCCACCTCGG CGCGAAGGCCGCGCCGCCGCTGCCGCTCAGCGAGCCGCTGCCGCCGCGCTACGATCCGGCCGAGCTGGCCGGCGTGATCC CGGCCGATACGCGCAAGCCGTTCGACGTGCGCGAGGTGATCGCGCGCATCGTCGACGATTCGGCCTTCGACGAATTCAAG GCGCGCTTCGGCACCACGCTCGTCACCGGCTTCGCGCGGATCTGGGGTCATCCGGTCGGGATCGTCGCCAACAACGGCAT CCTGTTCTCCGAATCGGCCGTGAAGGGCGCGCATTTCATCGAGCTGTGCTGCCAGCGCAAGATCCCGCTGGTGTTCCTGC AGAACATCACGGGCTTCATGGTGGGCCGCAAATACGAGAACGAGGGCATCGCGCGGCACGGCGCGAAGATGGTCACCGCG GTGGCCACGGCGAAGGTGCCGAAGTTCACGGTGATCATCGGCGGCTCGTTCGGCGCCGGCAACTACGGCATGTGCGGCCG GGCCTACTCGCCGCGCTTCCTCTGGATGTGGCCGAACGCGCGCATCTCGGTGATGGGCGGCGACCAGGCCGCCTCGGTGC TGGCCACGGTGCGCCGCGACGGCATCGAGGCCAAGGGCGGCAGCTGGTCGGCCGACGAGGAGGCCGCGTTCAAGGCGCCG ATCCGCGAGCAGTACGAGCGGCAGGGCCATCCGTACTACGCGAGCGCGCGGCTGTGGGACGACGGCGTGATCGAGCCGGC GCGCACGCGCGACGTGCTCGGGCTGGGCCTGGCCGCCGCCATGAACGCGCCGATCGAGCAGACGCGCTTCGGCGTGTTCC GGATGTAA
Upstream 100 bases:
>100_bases GCTCTACGAGATCGGCGCGGGCACGAGCGAAATCCGCCGCATGCTGATCGGCCGCGAACTGTTCGCCGAGACGGCGTAAG CGCCGCGCGGAGCCGACACG
Downstream 100 bases:
>100_bases GGAGGCAGGCATGCGGTACGAGACCAGATACGAGACGATCCGCGTCACCGAGGAGCAGCGCATCGCCACGGTCACGCTCG CGCGGCCCGAGGTGCGCAAC
Product: carboxyl transferase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 535; Mature: 534
Protein sequence:
>535_residues MPILESKLNPRSDEFRANAAALDALVADLREKIERLAQGGGQAARDKHVARGKLLPRERIALLLDPGSPFLELSQLAAFG MYNDDAPGAGIITGIGRIAGRECMIVCNDATVKGGTYYPVTVKKHVRAQEIAAENRLPCVYLVDSGGANLPNQDEVFPDR DHFGRIFYNQANLSAAGIAQIAVVMGSCTAGGAYVPAMSDESIIVREQGTIFLGGPPLVKAAIGEEVSAEDLGGGDVHTR LSGVADHLARNDAHALAIARSIVAHLGAKAAPPLPLSEPLPPRYDPAELAGVIPADTRKPFDVREVIARIVDDSAFDEFK ARFGTTLVTGFARIWGHPVGIVANNGILFSESAVKGAHFIELCCQRKIPLVFLQNITGFMVGRKYENEGIARHGAKMVTA VATAKVPKFTVIIGGSFGAGNYGMCGRAYSPRFLWMWPNARISVMGGDQAASVLATVRRDGIEAKGGSWSADEEAAFKAP IREQYERQGHPYYASARLWDDGVIEPARTRDVLGLGLAAAMNAPIEQTRFGVFRM
Sequences:
>Translated_535_residues MPILESKLNPRSDEFRANAAALDALVADLREKIERLAQGGGQAARDKHVARGKLLPRERIALLLDPGSPFLELSQLAAFG MYNDDAPGAGIITGIGRIAGRECMIVCNDATVKGGTYYPVTVKKHVRAQEIAAENRLPCVYLVDSGGANLPNQDEVFPDR DHFGRIFYNQANLSAAGIAQIAVVMGSCTAGGAYVPAMSDESIIVREQGTIFLGGPPLVKAAIGEEVSAEDLGGGDVHTR LSGVADHLARNDAHALAIARSIVAHLGAKAAPPLPLSEPLPPRYDPAELAGVIPADTRKPFDVREVIARIVDDSAFDEFK ARFGTTLVTGFARIWGHPVGIVANNGILFSESAVKGAHFIELCCQRKIPLVFLQNITGFMVGRKYENEGIARHGAKMVTA VATAKVPKFTVIIGGSFGAGNYGMCGRAYSPRFLWMWPNARISVMGGDQAASVLATVRRDGIEAKGGSWSADEEAAFKAP IREQYERQGHPYYASARLWDDGVIEPARTRDVLGLGLAAAMNAPIEQTRFGVFRM >Mature_534_residues PILESKLNPRSDEFRANAAALDALVADLREKIERLAQGGGQAARDKHVARGKLLPRERIALLLDPGSPFLELSQLAAFGM YNDDAPGAGIITGIGRIAGRECMIVCNDATVKGGTYYPVTVKKHVRAQEIAAENRLPCVYLVDSGGANLPNQDEVFPDRD HFGRIFYNQANLSAAGIAQIAVVMGSCTAGGAYVPAMSDESIIVREQGTIFLGGPPLVKAAIGEEVSAEDLGGGDVHTRL SGVADHLARNDAHALAIARSIVAHLGAKAAPPLPLSEPLPPRYDPAELAGVIPADTRKPFDVREVIARIVDDSAFDEFKA RFGTTLVTGFARIWGHPVGIVANNGILFSESAVKGAHFIELCCQRKIPLVFLQNITGFMVGRKYENEGIARHGAKMVTAV ATAKVPKFTVIIGGSFGAGNYGMCGRAYSPRFLWMWPNARISVMGGDQAASVLATVRRDGIEAKGGSWSADEEAAFKAPI REQYERQGHPYYASARLWDDGVIEPARTRDVLGLGLAAAMNAPIEQTRFGVFRM
Specific function: Unknown
COG id: COG4799
COG function: function code I; Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 carboxyltransferase domain [H]
Homologues:
Organism=Homo sapiens, GI11545863, Length=522, Percent_Identity=66.8582375478927, Blast_Score=712, Evalue=0.0, Organism=Homo sapiens, GI119943100, Length=524, Percent_Identity=33.7786259541985, Blast_Score=256, Evalue=5e-68, Organism=Homo sapiens, GI295821216, Length=544, Percent_Identity=32.5367647058824, Blast_Score=244, Evalue=2e-64, Organism=Homo sapiens, GI310133460, Length=132, Percent_Identity=62.8787878787879, Blast_Score=158, Evalue=1e-38, Organism=Caenorhabditis elegans, GI17552936, Length=538, Percent_Identity=61.5241635687732, Blast_Score=700, Evalue=0.0, Organism=Caenorhabditis elegans, GI25147359, Length=525, Percent_Identity=34.4761904761905, Blast_Score=255, Evalue=4e-68, Organism=Caenorhabditis elegans, GI25147362, Length=501, Percent_Identity=35.3293413173653, Blast_Score=254, Evalue=8e-68, Organism=Drosophila melanogaster, GI24586065, Length=553, Percent_Identity=63.8336347197107, Blast_Score=728, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000022 - InterPro: IPR011763 - InterPro: IPR011762 [H]
Pfam domain/function: PF01039 Carboxyl_trans [H]
EC number: NA
Molecular weight: Translated: 57297; Mature: 57166
Theoretical pI: Translated: 7.31; Mature: 7.31
Prosite motif: PS50980 COA_CT_NTER ; PS50989 COA_CT_CTER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPILESKLNPRSDEFRANAAALDALVADLREKIERLAQGGGQAARDKHVARGKLLPRERI CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCE ALLLDPGSPFLELSQLAAFGMYNDDAPGAGIITGIGRIAGRECMIVCNDATVKGGTYYPV EEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCEECCCEEEEE TVKKHVRAQEIAAENRLPCVYLVDSGGANLPNQDEVFPDRDHFGRIFYNQANLSAAGIAQ EHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHH IAVVMGSCTAGGAYVPAMSDESIIVREQGTIFLGGPPLVKAAIGEEVSAEDLGGGDVHTR HHHHHHCCCCCCEEECCCCCCEEEEEECCEEEECCCCHHHHHHCCCCCCCCCCCCHHHHH LSGVADHLARNDAHALAIARSIVAHLGAKAAPPLPLSEPLPPRYDPAELAGVIPADTRKP HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC FDVREVIARIVDDSAFDEFKARFGTTLVTGFARIWGHPVGIVANNGILFSESAVKGAHFI CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEECCHHCHHHHH ELCCQRKIPLVFLQNITGFMVGRKYENEGIARHGAKMVTAVATAKVPKFTVIIGGSFGAG HHHHCCCCCEEEECCCHHHHHCCEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC NYGMCGRAYSPRFLWMWPNARISVMGGDQAASVLATVRRDGIEAKGGSWSADEEAAFKAP CCCCCCCCCCCEEEEECCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCH IREQYERQGHPYYASARLWDDGVIEPARTRDVLGLGLAAAMNAPIEQTRFGVFRM HHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCC >Mature Secondary Structure PILESKLNPRSDEFRANAAALDALVADLREKIERLAQGGGQAARDKHVARGKLLPRERI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCE ALLLDPGSPFLELSQLAAFGMYNDDAPGAGIITGIGRIAGRECMIVCNDATVKGGTYYPV EEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCEECCCEEEEE TVKKHVRAQEIAAENRLPCVYLVDSGGANLPNQDEVFPDRDHFGRIFYNQANLSAAGIAQ EHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHH IAVVMGSCTAGGAYVPAMSDESIIVREQGTIFLGGPPLVKAAIGEEVSAEDLGGGDVHTR HHHHHHCCCCCCEEECCCCCCEEEEEECCEEEECCCCHHHHHHCCCCCCCCCCCCHHHHH LSGVADHLARNDAHALAIARSIVAHLGAKAAPPLPLSEPLPPRYDPAELAGVIPADTRKP HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC FDVREVIARIVDDSAFDEFKARFGTTLVTGFARIWGHPVGIVANNGILFSESAVKGAHFI CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEECCHHCHHHHH ELCCQRKIPLVFLQNITGFMVGRKYENEGIARHGAKMVTAVATAKVPKFTVIIGGSFGAG HHHHCCCCCEEEECCCHHHHHCCEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC NYGMCGRAYSPRFLWMWPNARISVMGGDQAASVLATVRRDGIEAKGGSWSADEEAAFKAP CCCCCCCCCCCEEEEECCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCH IREQYERQGHPYYASARLWDDGVIEPARTRDVLGLGLAAAMNAPIEQTRFGVFRM HHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 9387222 [H]