| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024514
Identifier: 238024514
GI number: 238024514
Start: 1430777
End: 1431184
Strand: Direct
Name: 238024514
Synonym: bglu_2g11190
Alternate gene names: NA
Gene position: 1430777-1431184 (Clockwise)
Preceding gene: 238024513
Following gene: 238024515
Centisome position: 50.61
GC content: 64.46
Gene sequence:
>408_bases ATGGCAAGACGCAAAATCAGCAACGAGTTGTGGGTGGAGCTGGAACCGCTGATTCCGGAATTCACCCCATCGCCCAAGGG CGGACGGCGGCGCACGGTCGATGACCGAGCTGCGCTCAACGGCATCCTATATGTGCTGCAAACCGGTATCCCGTGGGAAG ACCTCCCGCAAGAACTGGGCTTCGGCAGTGGCATGACGTGTTGGCGACGTCTGCGAGACTGGCAAGCGGCCGGTGTATGG CGCCGGCTGCATCTGGCGATGCTGCGTCGGCTGCGTGAGCACGACCAGATCGATTGGGAACGCGCCAGCCTCGATGGAGC CAGCGTCTCCAGCCCCCGGGGGGCCAGGAAACCGGCCCCAACCCGACCGACCGCGGCAAGCTCGGATCGAAGCGACACAT CGTCGTAG
Upstream 100 bases:
>100_bases GGCGCACCGCGCTGGACTTGTCCACCGGCGCGTCGGCGCCCGGCTTAGAGCCGCTAACATAACCTAGACATGACGTAGCA GAAGTCGTATCGTCTGCGAT
Downstream 100 bases:
>100_bases ATGCACGCGGCATTCCTCTGGCCGTCACGATCACGGGAGCCAACCGCCACGATTCGATGGCATTCGAGTCCACGCTCGAT GCCATTCCTGCGGTACCCGG
Product: putative TIS1421-transposase orfA protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MARRKISNELWVELEPLIPEFTPSPKGGRRRTVDDRAALNGILYVLQTGIPWEDLPQELGFGSGMTCWRRLRDWQAAGVW RRLHLAMLRRLREHDQIDWERASLDGASVSSPRGARKPAPTRPTAASSDRSDTSS
Sequences:
>Translated_135_residues MARRKISNELWVELEPLIPEFTPSPKGGRRRTVDDRAALNGILYVLQTGIPWEDLPQELGFGSGMTCWRRLRDWQAAGVW RRLHLAMLRRLREHDQIDWERASLDGASVSSPRGARKPAPTRPTAASSDRSDTSS >Mature_134_residues ARRKISNELWVELEPLIPEFTPSPKGGRRRTVDDRAALNGILYVLQTGIPWEDLPQELGFGSGMTCWRRLRDWQAAGVWR RLHLAMLRRLREHDQIDWERASLDGASVSSPRGARKPAPTRPTAASSDRSDTSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 6 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15319; Mature: 15187
Theoretical pI: Translated: 10.90; Mature: 10.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRKISNELWVELEPLIPEFTPSPKGGRRRTVDDRAALNGILYVLQTGIPWEDLPQELG CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCC FGSGMTCWRRLRDWQAAGVWRRLHLAMLRRLREHDQIDWERASLDGASVSSPRGARKPAP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCC TRPTAASSDRSDTSS CCCCCCCCCCCCCCC >Mature Secondary Structure ARRKISNELWVELEPLIPEFTPSPKGGRRRTVDDRAALNGILYVLQTGIPWEDLPQELG CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCC FGSGMTCWRRLRDWQAAGVWRRLHLAMLRRLREHDQIDWERASLDGASVSSPRGARKPAP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCC TRPTAASSDRSDTSS CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1650732 [H]