Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238024438

Identifier: 238024438

GI number: 238024438

Start: 1321985

End: 1322653

Strand: Direct

Name: 238024438

Synonym: bglu_2g10340

Alternate gene names: NA

Gene position: 1321985-1322653 (Clockwise)

Preceding gene: 238024429

Following gene: 238024439

Centisome position: 46.76

GC content: 64.42

Gene sequence:

>669_bases
ATGATTCAATTTGAGCCGAAGTACATCACGTTCGACTGCTACGGCACGCTGATTCACTTCCGAATGGCCGAGATGGCGCG
CGAGGTCTATGCCGACCGGCTCTCGCCGGTCGCGCTCGAGCAGTTCGTGCGCGCGTTCGCCGCCTACCGGCTCGACGAGG
TGCTCGGCGCCTGGAAGCCGTTTCGCGAGGTCGTCGTCAATGCAATTCGGCGCACCTGCCAGCGGATCGGCGTGAAGTTC
GACGAGGCCGAAGCCGAGCGCTTCTATCTGGCGGTGCCGACCTGGGGCCCGCACCCGGACGTGCCGGCGGGCCTGTCGCG
GCTCGCGACCAAGTACAAGCTGGTGATCCTGTCGAATGCCTCGGACGACCAGATCATGAGCAACGTCGACAAGCTCGGCG
CGCCGTTCCATGCGGTCTTCACCGCCCAGCAGGCGCAGTCCTACAAGCCGCGCATGCCCGGCTTCGAATACATGTTCGAC
CAGCTCGGCTGCAAGCCGGAGGACGTGCTGCACGTATCGTCGAGCCTGCGCTACGACCTGATGACGGCCGACGATCTCGG
CATCCGCCACAAGGCGTTCGTCAATCGCGGCCACGAGCCGGGCACGCCGTTCTACAACTATTACGAAGTGTCCGACATCG
GCCAACTCGCCACGCAGCTCGGCCTGTAG

Upstream 100 bases:

>100_bases
GCGGCAAACGATGTGCGAACGGCTTTTTGCCCTGTTCCAATCTCGTTGAACCCAGCCCGTCCCCGGCCCTGCCGGGGCTT
CATACCGACAGGACGTCACC

Downstream 100 bases:

>100_bases
GTCGGCCTACAGGCCGCCTACAGGCGGCGCCCGCGCCGGCGGGTCGCGCGGAAATGGGACAGACCGGTCTGGTGCACCTG
CCGGCCGAAGCCGCCGGCCG

Product: Haloacid dehalogenase

Products: NA

Alternate protein names: HAD Family Hydrolase; Hydrolase; 2-Haloalkanoic Acid Dehalogenase; Haloacid Dehalogenase-Like Hydrolase; Haloalkanoic Acid Dehalogenase; HAD-Superfamily Hydrolase; Haloacid Dehalogenase; Dehalogenase; 2-Haloacid Dehalogenase; Haloacid Dehalogenase I; Haloacid Dehydrogenase; 2-Haloacid Halidohydrolase Type II; HAD Superfamily Hydrolase; Haloacid Dehalogenase Type II Truncated; 2-Haloacid Halidohydrolase IVa; 2-Haloacid Halidohydrolase IVA; 2-Haloacid Dehalogenase Protein; Dehalogenase Protein; 2-Haloalkanoic Acid Dehalogenase Protein; Epoxide Hydrolase; HAD Superfamily Haloalkanoic Acid Dehalogenase

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MIQFEPKYITFDCYGTLIHFRMAEMAREVYADRLSPVALEQFVRAFAAYRLDEVLGAWKPFREVVVNAIRRTCQRIGVKF
DEAEAERFYLAVPTWGPHPDVPAGLSRLATKYKLVILSNASDDQIMSNVDKLGAPFHAVFTAQQAQSYKPRMPGFEYMFD
QLGCKPEDVLHVSSSLRYDLMTADDLGIRHKAFVNRGHEPGTPFYNYYEVSDIGQLATQLGL

Sequences:

>Translated_222_residues
MIQFEPKYITFDCYGTLIHFRMAEMAREVYADRLSPVALEQFVRAFAAYRLDEVLGAWKPFREVVVNAIRRTCQRIGVKF
DEAEAERFYLAVPTWGPHPDVPAGLSRLATKYKLVILSNASDDQIMSNVDKLGAPFHAVFTAQQAQSYKPRMPGFEYMFD
QLGCKPEDVLHVSSSLRYDLMTADDLGIRHKAFVNRGHEPGTPFYNYYEVSDIGQLATQLGL
>Mature_222_residues
MIQFEPKYITFDCYGTLIHFRMAEMAREVYADRLSPVALEQFVRAFAAYRLDEVLGAWKPFREVVVNAIRRTCQRIGVKF
DEAEAERFYLAVPTWGPHPDVPAGLSRLATKYKLVILSNASDDQIMSNVDKLGAPFHAVFTAQQAQSYKPRMPGFEYMFD
QLGCKPEDVLHVSSSLRYDLMTADDLGIRHKAFVNRGHEPGTPFYNYYEVSDIGQLATQLGL

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25300; Mature: 25300

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQFEPKYITFDCYGTLIHFRMAEMAREVYADRLSPVALEQFVRAFAAYRLDEVLGAWKP
CCEECCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FREVVVNAIRRTCQRIGVKFDEAEAERFYLAVPTWGPHPDVPAGLSRLATKYKLVILSNA
HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHEEEEEEECC
SDDQIMSNVDKLGAPFHAVFTAQQAQSYKPRMPGFEYMFDQLGCKPEDVLHVSSSLRYDL
CHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCEEE
MTADDLGIRHKAFVNRGHEPGTPFYNYYEVSDIGQLATQLGL
ECCCCCCCHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHCC
>Mature Secondary Structure
MIQFEPKYITFDCYGTLIHFRMAEMAREVYADRLSPVALEQFVRAFAAYRLDEVLGAWKP
CCEECCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FREVVVNAIRRTCQRIGVKFDEAEAERFYLAVPTWGPHPDVPAGLSRLATKYKLVILSNA
HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHEEEEEEECC
SDDQIMSNVDKLGAPFHAVFTAQQAQSYKPRMPGFEYMFDQLGCKPEDVLHVSSSLRYDL
CHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCEEE
MTADDLGIRHKAFVNRGHEPGTPFYNYYEVSDIGQLATQLGL
ECCCCCCCHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA