| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024438
Identifier: 238024438
GI number: 238024438
Start: 1321985
End: 1322653
Strand: Direct
Name: 238024438
Synonym: bglu_2g10340
Alternate gene names: NA
Gene position: 1321985-1322653 (Clockwise)
Preceding gene: 238024429
Following gene: 238024439
Centisome position: 46.76
GC content: 64.42
Gene sequence:
>669_bases ATGATTCAATTTGAGCCGAAGTACATCACGTTCGACTGCTACGGCACGCTGATTCACTTCCGAATGGCCGAGATGGCGCG CGAGGTCTATGCCGACCGGCTCTCGCCGGTCGCGCTCGAGCAGTTCGTGCGCGCGTTCGCCGCCTACCGGCTCGACGAGG TGCTCGGCGCCTGGAAGCCGTTTCGCGAGGTCGTCGTCAATGCAATTCGGCGCACCTGCCAGCGGATCGGCGTGAAGTTC GACGAGGCCGAAGCCGAGCGCTTCTATCTGGCGGTGCCGACCTGGGGCCCGCACCCGGACGTGCCGGCGGGCCTGTCGCG GCTCGCGACCAAGTACAAGCTGGTGATCCTGTCGAATGCCTCGGACGACCAGATCATGAGCAACGTCGACAAGCTCGGCG CGCCGTTCCATGCGGTCTTCACCGCCCAGCAGGCGCAGTCCTACAAGCCGCGCATGCCCGGCTTCGAATACATGTTCGAC CAGCTCGGCTGCAAGCCGGAGGACGTGCTGCACGTATCGTCGAGCCTGCGCTACGACCTGATGACGGCCGACGATCTCGG CATCCGCCACAAGGCGTTCGTCAATCGCGGCCACGAGCCGGGCACGCCGTTCTACAACTATTACGAAGTGTCCGACATCG GCCAACTCGCCACGCAGCTCGGCCTGTAG
Upstream 100 bases:
>100_bases GCGGCAAACGATGTGCGAACGGCTTTTTGCCCTGTTCCAATCTCGTTGAACCCAGCCCGTCCCCGGCCCTGCCGGGGCTT CATACCGACAGGACGTCACC
Downstream 100 bases:
>100_bases GTCGGCCTACAGGCCGCCTACAGGCGGCGCCCGCGCCGGCGGGTCGCGCGGAAATGGGACAGACCGGTCTGGTGCACCTG CCGGCCGAAGCCGCCGGCCG
Product: Haloacid dehalogenase
Products: NA
Alternate protein names: HAD Family Hydrolase; Hydrolase; 2-Haloalkanoic Acid Dehalogenase; Haloacid Dehalogenase-Like Hydrolase; Haloalkanoic Acid Dehalogenase; HAD-Superfamily Hydrolase; Haloacid Dehalogenase; Dehalogenase; 2-Haloacid Dehalogenase; Haloacid Dehalogenase I; Haloacid Dehydrogenase; 2-Haloacid Halidohydrolase Type II; HAD Superfamily Hydrolase; Haloacid Dehalogenase Type II Truncated; 2-Haloacid Halidohydrolase IVa; 2-Haloacid Halidohydrolase IVA; 2-Haloacid Dehalogenase Protein; Dehalogenase Protein; 2-Haloalkanoic Acid Dehalogenase Protein; Epoxide Hydrolase; HAD Superfamily Haloalkanoic Acid Dehalogenase
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MIQFEPKYITFDCYGTLIHFRMAEMAREVYADRLSPVALEQFVRAFAAYRLDEVLGAWKPFREVVVNAIRRTCQRIGVKF DEAEAERFYLAVPTWGPHPDVPAGLSRLATKYKLVILSNASDDQIMSNVDKLGAPFHAVFTAQQAQSYKPRMPGFEYMFD QLGCKPEDVLHVSSSLRYDLMTADDLGIRHKAFVNRGHEPGTPFYNYYEVSDIGQLATQLGL
Sequences:
>Translated_222_residues MIQFEPKYITFDCYGTLIHFRMAEMAREVYADRLSPVALEQFVRAFAAYRLDEVLGAWKPFREVVVNAIRRTCQRIGVKF DEAEAERFYLAVPTWGPHPDVPAGLSRLATKYKLVILSNASDDQIMSNVDKLGAPFHAVFTAQQAQSYKPRMPGFEYMFD QLGCKPEDVLHVSSSLRYDLMTADDLGIRHKAFVNRGHEPGTPFYNYYEVSDIGQLATQLGL >Mature_222_residues MIQFEPKYITFDCYGTLIHFRMAEMAREVYADRLSPVALEQFVRAFAAYRLDEVLGAWKPFREVVVNAIRRTCQRIGVKF DEAEAERFYLAVPTWGPHPDVPAGLSRLATKYKLVILSNASDDQIMSNVDKLGAPFHAVFTAQQAQSYKPRMPGFEYMFD QLGCKPEDVLHVSSSLRYDLMTADDLGIRHKAFVNRGHEPGTPFYNYYEVSDIGQLATQLGL
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25300; Mature: 25300
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQFEPKYITFDCYGTLIHFRMAEMAREVYADRLSPVALEQFVRAFAAYRLDEVLGAWKP CCEECCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH FREVVVNAIRRTCQRIGVKFDEAEAERFYLAVPTWGPHPDVPAGLSRLATKYKLVILSNA HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHEEEEEEECC SDDQIMSNVDKLGAPFHAVFTAQQAQSYKPRMPGFEYMFDQLGCKPEDVLHVSSSLRYDL CHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCEEE MTADDLGIRHKAFVNRGHEPGTPFYNYYEVSDIGQLATQLGL ECCCCCCCHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHCC >Mature Secondary Structure MIQFEPKYITFDCYGTLIHFRMAEMAREVYADRLSPVALEQFVRAFAAYRLDEVLGAWKP CCEECCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH FREVVVNAIRRTCQRIGVKFDEAEAERFYLAVPTWGPHPDVPAGLSRLATKYKLVILSNA HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHEEEEEEECC SDDQIMSNVDKLGAPFHAVFTAQQAQSYKPRMPGFEYMFDQLGCKPEDVLHVSSSLRYDL CHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCEEE MTADDLGIRHKAFVNRGHEPGTPFYNYYEVSDIGQLATQLGL ECCCCCCCHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA