| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is fur [H]
Identifier: 238024419
GI number: 238024419
Start: 1290399
End: 1290842
Strand: Direct
Name: fur [H]
Synonym: bglu_2g10120
Alternate gene names: 238024419
Gene position: 1290399-1290842 (Clockwise)
Preceding gene: 238024417
Following gene: 238024420
Centisome position: 45.64
GC content: 66.67
Gene sequence:
>444_bases ATGCCAGTCCATGAGCAGTTGCAGGGTGCGGGATTGCGCGCGACGTTGCCGCGCGTGAAGGTGCTGGAGTTCTTCGCGGC GGCGCGTCCGCGGCACGTCAGTGCCGAGGACGTGTTTCGCCATCTGCTGGCCGAGAAGATCGACATCGGTCTCGCCACGG TCTACCGGGTGCTCTCGCAGTTCGTCGAGGCGGGAATCCTGACGAGCGGCACGCTCGATTCGAACCGCCACGTCTACGAG CTCAACGACGGCAAGCGGCACGATCACATCATCTGCCTGGCTTGCGGCAAGGTGGACGAGTTCTCCGATCCGCTGATCGA CGGCCGTGAGAAGGCGGCCGCCGATGCGCTCGGCTATCTGCTGACGGGCCACCATCTGGTGCTGCATGGCTACTGCGCCG AATGCCGGCCGAAGCCGCGCGGGGCCGACCCCGACGGCGCCTGA
Upstream 100 bases:
>100_bases CGGCCGGGTACTCGGGCCGAGGCGCGCGGCGGCGGGGCGGCGAGATCGGTCGCGGCGGGCCGCCCGGGCCGGCCCGTCCA TTGTCGACTCGTCTATGCTG
Downstream 100 bases:
>100_bases TTCTTCCGAGTCCGTCCGAATCCGCCCGGCTCGCCCCGGGCGCGGCGCGCTGCCGAACGCGGGGCCTTCGGCAGCGCCGC CATCCCATTCCAATAACGAT
Product: Fur family ferric uptake regulator
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MPVHEQLQGAGLRATLPRVKVLEFFAAARPRHVSAEDVFRHLLAEKIDIGLATVYRVLSQFVEAGILTSGTLDSNRHVYE LNDGKRHDHIICLACGKVDEFSDPLIDGREKAAADALGYLLTGHHLVLHGYCAECRPKPRGADPDGA
Sequences:
>Translated_147_residues MPVHEQLQGAGLRATLPRVKVLEFFAAARPRHVSAEDVFRHLLAEKIDIGLATVYRVLSQFVEAGILTSGTLDSNRHVYE LNDGKRHDHIICLACGKVDEFSDPLIDGREKAAADALGYLLTGHHLVLHGYCAECRPKPRGADPDGA >Mature_146_residues PVHEQLQGAGLRATLPRVKVLEFFAAARPRHVSAEDVFRHLLAEKIDIGLATVYRVLSQFVEAGILTSGTLDSNRHVYEL NDGKRHDHIICLACGKVDEFSDPLIDGREKAAADALGYLLTGHHLVLHGYCAECRPKPRGADPDGA
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=133, Percent_Identity=49.6240601503759, Blast_Score=127, Evalue=3e-31,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 16090; Mature: 15958
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVHEQLQGAGLRATLPRVKVLEFFAAARPRHVSAEDVFRHLLAEKIDIGLATVYRVLSQ CCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH FVEAGILTSGTLDSNRHVYELNDGKRHDHIICLACGKVDEFSDPLIDGREKAAADALGYL HHHHCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH LTGHHLVLHGYCAECRPKPRGADPDGA HHCCCCEEEEEHHHCCCCCCCCCCCCC >Mature Secondary Structure PVHEQLQGAGLRATLPRVKVLEFFAAARPRHVSAEDVFRHLLAEKIDIGLATVYRVLSQ CCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH FVEAGILTSGTLDSNRHVYELNDGKRHDHIICLACGKVDEFSDPLIDGREKAAADALGYL HHHHCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH LTGHHLVLHGYCAECRPKPRGADPDGA HHCCCCEEEEEHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12910271 [H]