| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024396
Identifier: 238024396
GI number: 238024396
Start: 1242970
End: 1244382
Strand: Reverse
Name: 238024396
Synonym: bglu_2g09890
Alternate gene names: NA
Gene position: 1244382-1242970 (Counterclockwise)
Preceding gene: 238024397
Following gene: 238024395
Centisome position: 44.01
GC content: 69.0
Gene sequence:
>1413_bases TTGAGATCAGATCACCCTCCTCCTCGCGCCGCCCGTTCCGGGCGCTACCTGCTTGCCGCACTGGCGCTGCTCCTGCTCGC GGCGGGCGGCGTGCTGTATTGGCTGCTGCCCGCCGCAACCGGCTACGCCTCGCACTACCTCTGCGTGCGCGTGCTCGCCG GCGGCGAGGCCGACCCGCAGACGGTGTTCGAACGCGAAGTCAAGCCGATCAACCCGCTGTTCCGCTTGGTCACCTACCGC ATCGACCGCGACACCGCGACGGCCAGCGCGGCCGGCCTCGGCCTGCTGCGCAAGACCGTGGCCCTCTACCGCCCCGGCCT GGGCTGCACCGTGAGCCCCGCCACCGATCTCGACGCCTTGCGCGCGCAAGGCCAGGGCCTCGGCCTGCCCGCTGCAAGCG ATCCCGAAACGCCTGGCGCGGCCGAACCGCCTGCCCTGGCAAAGGTGCTGGACCGGGCGCTCGCCGAACCGGGGCCGAAG TCCTTACGCAACACCTTGGCCGTGGTGGTGCGCCAGCACGGGGCGATCGTCGGAGAGCGCTACGCGCCGGGCGTCGGCAC CGAAACCCCGCTGCTCGGCTGGTCCATGACGAAGACCGTGACCGGCCTGCTGGCCGGCACGCTGGTGGCGGACGGCAAGC TCTCGCTGGACCAAACGGACCTGATGCCGGAATGGTCGGCCCCCGACGATCCGCGCCGCTCGATCCAGCTACGCAACCTG CTGCAATGGAACAGCGGCCTGGATTATCACGAGGGTTATCTGCCCGGCTCGGACACCACGACGATGCTCTACCAGAGCGC CGACATGGCGCACTTCGTGGCCAGCCGCCCGCTCGCGCAACCGCCGGGGCACCAAGTCGACTACCAAAGTGGCGGCAGCG TGCTGGTGGCGAACATCGCCGCGCGCGCCCTATCATCGCGGCCGCTAGCCATCGTGCCGTTCGCGCGCGCGCGCTTGTTC GCGCCGCTCGGGATTCATACCGCGATGCTCGAGCCCGATGCGGCCGGCACCCTGGTCGGCGGCAGCTACATGCTCGCGTC GGCCCGCGACTGGTCGAAGATCGGCCAGCTGATTCTTCAGCATGGTGAATGGCGGGGCCGGCGCATCGTCGACGCGGACT GGATCCGCTTTATGTCCACGCCACAGACCGCGCTCGGCGACAGCCAGCACGGCGCGCATCTGTGGCTCAATGCGGGCCTC GCCGGAGAACGTCGCTTCCCTTCGCTGCCCGAGGACCTGACGATGCTCGACGGCTTCAATTATCAACTGGTGGTGATCGT GCCGTCATGCCAAGCGGTGATCACCAGGCTCGGCGCGACGGTCGATCGAAGCTGGAATACCGAGACCTTCGTCCACGACG TGATGGCGAGCCTGCCCGGGTGCACGCCGCCGCTCAAAACGGCCATGAGGTAA
Upstream 100 bases:
>100_bases GCGACATCGAGTCGGAACGCCTTTATCTGAAAAAAGACATCATCCTCTGAGCCCGCATCGCCACCCGGCGAATCCGTATT TGCGACACAGGAAACCTCCC
Downstream 100 bases:
>100_bases GTAGCGATGCGATCCTTGCAAATACGTGCCGCCAACCCGGCCGACCTGCCCGCCCTGCGCGAGCTGTTCCTGCACACTCG CCGCGAGACCTTCGTCTGGC
Product: beta-lactamase
Products: NA
Alternate protein names: 6-Aminohexanoate-Dimer Hydrolase; Beta-Lactamase Family Protein; 6-Aminohexanoate-Dimer Hydrolase Protein; Beta-Lactamase Class C; Hydrolase Transmembrane Protein; Beta-Lactamase Class C Family Protein; Secreted Beta-Lactamase Family Protein; Hydrolase; Beta-Lactamase Class C Protein; Membrane Or Secreted Beta-Lactamase Family Protein; Hydrolatse Transmembrane Protein; Beta-Lactamase-Like Hydrolase
Number of amino acids: Translated: 470; Mature: 470
Protein sequence:
>470_residues MRSDHPPPRAARSGRYLLAALALLLLAAGGVLYWLLPAATGYASHYLCVRVLAGGEADPQTVFEREVKPINPLFRLVTYR IDRDTATASAAGLGLLRKTVALYRPGLGCTVSPATDLDALRAQGQGLGLPAASDPETPGAAEPPALAKVLDRALAEPGPK SLRNTLAVVVRQHGAIVGERYAPGVGTETPLLGWSMTKTVTGLLAGTLVADGKLSLDQTDLMPEWSAPDDPRRSIQLRNL LQWNSGLDYHEGYLPGSDTTTMLYQSADMAHFVASRPLAQPPGHQVDYQSGGSVLVANIAARALSSRPLAIVPFARARLF APLGIHTAMLEPDAAGTLVGGSYMLASARDWSKIGQLILQHGEWRGRRIVDADWIRFMSTPQTALGDSQHGAHLWLNAGL AGERRFPSLPEDLTMLDGFNYQLVVIVPSCQAVITRLGATVDRSWNTETFVHDVMASLPGCTPPLKTAMR
Sequences:
>Translated_470_residues MRSDHPPPRAARSGRYLLAALALLLLAAGGVLYWLLPAATGYASHYLCVRVLAGGEADPQTVFEREVKPINPLFRLVTYR IDRDTATASAAGLGLLRKTVALYRPGLGCTVSPATDLDALRAQGQGLGLPAASDPETPGAAEPPALAKVLDRALAEPGPK SLRNTLAVVVRQHGAIVGERYAPGVGTETPLLGWSMTKTVTGLLAGTLVADGKLSLDQTDLMPEWSAPDDPRRSIQLRNL LQWNSGLDYHEGYLPGSDTTTMLYQSADMAHFVASRPLAQPPGHQVDYQSGGSVLVANIAARALSSRPLAIVPFARARLF APLGIHTAMLEPDAAGTLVGGSYMLASARDWSKIGQLILQHGEWRGRRIVDADWIRFMSTPQTALGDSQHGAHLWLNAGL AGERRFPSLPEDLTMLDGFNYQLVVIVPSCQAVITRLGATVDRSWNTETFVHDVMASLPGCTPPLKTAMR >Mature_470_residues MRSDHPPPRAARSGRYLLAALALLLLAAGGVLYWLLPAATGYASHYLCVRVLAGGEADPQTVFEREVKPINPLFRLVTYR IDRDTATASAAGLGLLRKTVALYRPGLGCTVSPATDLDALRAQGQGLGLPAASDPETPGAAEPPALAKVLDRALAEPGPK SLRNTLAVVVRQHGAIVGERYAPGVGTETPLLGWSMTKTVTGLLAGTLVADGKLSLDQTDLMPEWSAPDDPRRSIQLRNL LQWNSGLDYHEGYLPGSDTTTMLYQSADMAHFVASRPLAQPPGHQVDYQSGGSVLVANIAARALSSRPLAIVPFARARLF APLGIHTAMLEPDAAGTLVGGSYMLASARDWSKIGQLILQHGEWRGRRIVDADWIRFMSTPQTALGDSQHGAHLWLNAGL AGERRFPSLPEDLTMLDGFNYQLVVIVPSCQAVITRLGATVDRSWNTETFVHDVMASLPGCTPPLKTAMR
Specific function: Unknown
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50334; Mature: 50334
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSDHPPPRAARSGRYLLAALALLLLAAGGVLYWLLPAATGYASHYLCVRVLAGGEADPQ CCCCCCCCHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHEECCCCCCHH TVFEREVKPINPLFRLVTYRIDRDTATASAAGLGLLRKTVALYRPGLGCTVSPATDLDAL HHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHH RAQGQGLGLPAASDPETPGAAEPPALAKVLDRALAEPGPKSLRNTLAVVVRQHGAIVGER HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEECCC YAPGVGTETPLLGWSMTKTVTGLLAGTLVADGKLSLDQTDLMPEWSAPDDPRRSIQLRNL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHH LQWNSGLDYHEGYLPGSDTTTMLYQSADMAHFVASRPLAQPPGHQVDYQSGGSVLVANIA HHHCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEHHHH ARALSSRPLAIVPFARARLFAPLGIHTAMLEPDAAGTLVGGSYMLASARDWSKIGQLILQ HHHHCCCCEEEEEHHHHHHHCCCCCHHEEECCCCCCEEECCCEEEECCCCHHHHHHHHHH HGEWRGRRIVDADWIRFMSTPQTALGDSQHGAHLWLNAGLAGERRFPSLPEDLTMLDGFN CCCCCCCEEECHHHHHHHCCCCHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCC YQLVVIVPSCQAVITRLGATVDRSWNTETFVHDVMASLPGCTPPLKTAMR EEEEEEECCHHHHHHHHCCHHCCCCCHHHHHHHHHHHCCCCCCCHHHHCC >Mature Secondary Structure MRSDHPPPRAARSGRYLLAALALLLLAAGGVLYWLLPAATGYASHYLCVRVLAGGEADPQ CCCCCCCCHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHEECCCCCCHH TVFEREVKPINPLFRLVTYRIDRDTATASAAGLGLLRKTVALYRPGLGCTVSPATDLDAL HHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHH RAQGQGLGLPAASDPETPGAAEPPALAKVLDRALAEPGPKSLRNTLAVVVRQHGAIVGER HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEECCC YAPGVGTETPLLGWSMTKTVTGLLAGTLVADGKLSLDQTDLMPEWSAPDDPRRSIQLRNL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHH LQWNSGLDYHEGYLPGSDTTTMLYQSADMAHFVASRPLAQPPGHQVDYQSGGSVLVANIA HHHCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEHHHH ARALSSRPLAIVPFARARLFAPLGIHTAMLEPDAAGTLVGGSYMLASARDWSKIGQLILQ HHHHCCCCEEEEEHHHHHHHCCCCCHHEEECCCCCCEEECCCEEEECCCCHHHHHHHHHH HGEWRGRRIVDADWIRFMSTPQTALGDSQHGAHLWLNAGLAGERRFPSLPEDLTMLDGFN CCCCCCCEEECHHHHHHHCCCCHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCC YQLVVIVPSCQAVITRLGATVDRSWNTETFVHDVMASLPGCTPPLKTAMR EEEEEEECCHHHHHHHHCCHHCCCCCHHHHHHHHHHHCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA