| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024381
Identifier: 238024381
GI number: 238024381
Start: 1194704
End: 1195804
Strand: Direct
Name: 238024381
Synonym: bglu_2g09740
Alternate gene names: NA
Gene position: 1194704-1195804 (Clockwise)
Preceding gene: 238024380
Following gene: 238024382
Centisome position: 42.26
GC content: 72.12
Gene sequence:
>1101_bases TTGACGACGGCACACGCGGCCGTGGCGCTCGAGTTCGGCGAGCTCGAACAGAACGGCACGCGCTTGGTGGTGGTGAGCCC GGCAGCGGGCGAGGCCGCCGCGCCGCCGCTCGAGGCCGCGCTGGGCGGCGAGCTCGCCGCGTTCGTCGCGCGCGAGAAGA CGCGCCACGGCGGCGTGCTGCTGCGCGGCTTCGCGCCGGTCGGTCCGGCCGGCTTCGAGCGCTGCGCGGCGCGCTTCGGC GAGCCGATCCGCGAGTACGAATTCGGCTCGACGCCGCGCAGCCGCGTGGACAACGGCGTGTTCTCGTCCACCGAGTATCC GGCGAACCAGTGGATCGACCAGCACAACGAGCAGTCGTACACGCTGAAGTGGCCGGGCTCGATCGGCTTTTACTGCGAGA TCGCGGCCGAGGCGGGCGGCGCCACGCCGGTGGCCGACAGCCGGCTGGTATACGCACGCCTCGATCCGGCGCTGCGGCGG CGTTTCGCCGAGCACGGCGTGATGTACGTGCGCAACTACGGCAACGGTCTCGACCTGTCCTGGGAGCAGGTGTTCGGCAC CGAGCAGCGCGCCGAGGTCGAGCGTTACTGCGCGGCGAACCGGATCGCCTGGGAATGGCTCGACGACGGCCAGGCGCTGC GCACGCGCCAGGTCTGCCAGTCGGAGCTGCGCCATCCGCAGACCGGCGAGACGGTCTGGTTCAACCAGGCCCATCTGTTC CACGTCACCAACCTGCCGGAAGGCGTGCGCGAGGCGATGCTCGAAGTCGTCGAGCCGGAGCGCCTGCCGCGCAACACCTA TTTCGGCGACGGCACGCCGATCGACGCCGCGATGCTCGACGAGATCCGCGCCGTCTATCGCGACACGATGCTGTCGTTCC CATGGCGGGCAGCCGACCTCCTGCTGCTCGACAACCTGCTGATGTCGCACGGCCGCGCGCCGTTCGCGGGCCAGCGCCGC GTGCTTGGTGGCGATGACGCGCTGACGTGCGTGCCGCCAGCCGGCGCCGCGCCCCGCCCGGGCGCGGCGCATGCCGGCGC GGCCGCCGGCCCGTGCGCCGGGCGGCCGCTTGCCGTTCCGAAACCGAACCTCGAAGAGTGA
Upstream 100 bases:
>100_bases CCGAACCCGAACCGGTACTCGCGCGCGTGGCCTCGTCGCTGGCGCGCGCGCTCGCCGGGCCGGCGCCGGCCGCGTTGCCG ACGGAGGCAGGATGGACGCA
Downstream 100 bases:
>100_bases ACCTGTGAGCGAAGTGTCGAACGATCTGCTGTCGATTTCGACGGCCTATGTCGCCCTGCCGCCCGAGAAGCGCGCCGTGT TCCGCGGCCGTCTGCGCGAG
Product: SyrP protein
Products: NA
Alternate protein names: SyrP Protein; SyrP-Like Protein; Non-Ribosomal Peptide Synthetase; Regulatory Protein; Regulatory Protein B; Amino Acid Adenylation Domain Protein; Taurine Catabolism Dioxygenase TauD/TfdA Family; Amino Acid Adenylation Domain-Containing Protein; Pyoverdine Biosynthesis Regulatory Gene; Condensation Domain-Containing Protein; Taurine Catabolism Dioxygenase TauD TfdA Family; Taurine Catabolism Dioxygenase Taud/Tfda; SyrP-Like Regulatory Protein; NRPS-Like Protein; Peptide Synthase; Syringomycin Biosynthesis; Oxidoreductase; Clavaminic Acid Synthetase-Like Protein; Pyoverdine Biosynthesis Regulatory Gene SyrP-Like; Non Ribosomal Peptide Synthase Antibiotic Synthesis; Multi-Domain Non-Ribosomal Peptide Synthetase; Syrp Like Protein Albicidin Biosynthesis Regulation; Regulatory Protein SyrP-Like; Syringomycin Biosynthesis ; Pyoverdine Biosynthesis Regulatory Protein SyrP-Like; Syringomycin Synthesis Regulator SyrP
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MTTAHAAVALEFGELEQNGTRLVVVSPAAGEAAAPPLEAALGGELAAFVAREKTRHGGVLLRGFAPVGPAGFERCAARFG EPIREYEFGSTPRSRVDNGVFSSTEYPANQWIDQHNEQSYTLKWPGSIGFYCEIAAEAGGATPVADSRLVYARLDPALRR RFAEHGVMYVRNYGNGLDLSWEQVFGTEQRAEVERYCAANRIAWEWLDDGQALRTRQVCQSELRHPQTGETVWFNQAHLF HVTNLPEGVREAMLEVVEPERLPRNTYFGDGTPIDAAMLDEIRAVYRDTMLSFPWRAADLLLLDNLLMSHGRAPFAGQRR VLGGDDALTCVPPAGAAPRPGAAHAGAAAGPCAGRPLAVPKPNLEE
Sequences:
>Translated_366_residues MTTAHAAVALEFGELEQNGTRLVVVSPAAGEAAAPPLEAALGGELAAFVAREKTRHGGVLLRGFAPVGPAGFERCAARFG EPIREYEFGSTPRSRVDNGVFSSTEYPANQWIDQHNEQSYTLKWPGSIGFYCEIAAEAGGATPVADSRLVYARLDPALRR RFAEHGVMYVRNYGNGLDLSWEQVFGTEQRAEVERYCAANRIAWEWLDDGQALRTRQVCQSELRHPQTGETVWFNQAHLF HVTNLPEGVREAMLEVVEPERLPRNTYFGDGTPIDAAMLDEIRAVYRDTMLSFPWRAADLLLLDNLLMSHGRAPFAGQRR VLGGDDALTCVPPAGAAPRPGAAHAGAAAGPCAGRPLAVPKPNLEE >Mature_365_residues TTAHAAVALEFGELEQNGTRLVVVSPAAGEAAAPPLEAALGGELAAFVAREKTRHGGVLLRGFAPVGPAGFERCAARFGE PIREYEFGSTPRSRVDNGVFSSTEYPANQWIDQHNEQSYTLKWPGSIGFYCEIAAEAGGATPVADSRLVYARLDPALRRR FAEHGVMYVRNYGNGLDLSWEQVFGTEQRAEVERYCAANRIAWEWLDDGQALRTRQVCQSELRHPQTGETVWFNQAHLFH VTNLPEGVREAMLEVVEPERLPRNTYFGDGTPIDAAMLDEIRAVYRDTMLSFPWRAADLLLLDNLLMSHGRAPFAGQRRV LGGDDALTCVPPAGAAPRPGAAHAGAAAGPCAGRPLAVPKPNLEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39877; Mature: 39746
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAHAAVALEFGELEQNGTRLVVVSPAAGEAAAPPLEAALGGELAAFVAREKTRHGGVL CCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCEE LRGFAPVGPAGFERCAARFGEPIREYEFGSTPRSRVDNGVFSSTEYPANQWIDQHNEQSY EECCCCCCHHHHHHHHHHHCCHHHHHCCCCCCHHHHCCCCCCCCCCCHHHHHHHCCCCEE TLKWPGSIGFYCEIAAEAGGATPVADSRLVYARLDPALRRRFAEHGVMYVRNYGNGLDLS EEECCCCCCEEEEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHCCEEEEEECCCCCCCC WEQVFGTEQRAEVERYCAANRIAWEWLDDGQALRTRQVCQSELRHPQTGETVWFNQAHLF HHHHHCCHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCEEEE HVTNLPEGVREAMLEVVEPERLPRNTYFGDGTPIDAAMLDEIRAVYRDTMLSFPWRAADL EECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHH LLLDNLLMSHGRAPFAGQRRVLGGDDALTCVPPAGAAPRPGAAHAGAAAGPCAGRPLAVP HHHHHHHHHCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC KPNLEE CCCCCC >Mature Secondary Structure TTAHAAVALEFGELEQNGTRLVVVSPAAGEAAAPPLEAALGGELAAFVAREKTRHGGVL CCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCEE LRGFAPVGPAGFERCAARFGEPIREYEFGSTPRSRVDNGVFSSTEYPANQWIDQHNEQSY EECCCCCCHHHHHHHHHHHCCHHHHHCCCCCCHHHHCCCCCCCCCCCHHHHHHHCCCCEE TLKWPGSIGFYCEIAAEAGGATPVADSRLVYARLDPALRRRFAEHGVMYVRNYGNGLDLS EEECCCCCCEEEEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHCCEEEEEECCCCCCCC WEQVFGTEQRAEVERYCAANRIAWEWLDDGQALRTRQVCQSELRHPQTGETVWFNQAHLF HHHHHCCHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCEEEE HVTNLPEGVREAMLEVVEPERLPRNTYFGDGTPIDAAMLDEIRAVYRDTMLSFPWRAADL EECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHH LLLDNLLMSHGRAPFAGQRRVLGGDDALTCVPPAGAAPRPGAAHAGAAAGPCAGRPLAVP HHHHHHHHHCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC KPNLEE CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA