Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

Click here to switch to the map view.

The map label for this gene is 238024381

Identifier: 238024381

GI number: 238024381

Start: 1194704

End: 1195804

Strand: Direct

Name: 238024381

Synonym: bglu_2g09740

Alternate gene names: NA

Gene position: 1194704-1195804 (Clockwise)

Preceding gene: 238024380

Following gene: 238024382

Centisome position: 42.26

GC content: 72.12

Gene sequence:

>1101_bases
TTGACGACGGCACACGCGGCCGTGGCGCTCGAGTTCGGCGAGCTCGAACAGAACGGCACGCGCTTGGTGGTGGTGAGCCC
GGCAGCGGGCGAGGCCGCCGCGCCGCCGCTCGAGGCCGCGCTGGGCGGCGAGCTCGCCGCGTTCGTCGCGCGCGAGAAGA
CGCGCCACGGCGGCGTGCTGCTGCGCGGCTTCGCGCCGGTCGGTCCGGCCGGCTTCGAGCGCTGCGCGGCGCGCTTCGGC
GAGCCGATCCGCGAGTACGAATTCGGCTCGACGCCGCGCAGCCGCGTGGACAACGGCGTGTTCTCGTCCACCGAGTATCC
GGCGAACCAGTGGATCGACCAGCACAACGAGCAGTCGTACACGCTGAAGTGGCCGGGCTCGATCGGCTTTTACTGCGAGA
TCGCGGCCGAGGCGGGCGGCGCCACGCCGGTGGCCGACAGCCGGCTGGTATACGCACGCCTCGATCCGGCGCTGCGGCGG
CGTTTCGCCGAGCACGGCGTGATGTACGTGCGCAACTACGGCAACGGTCTCGACCTGTCCTGGGAGCAGGTGTTCGGCAC
CGAGCAGCGCGCCGAGGTCGAGCGTTACTGCGCGGCGAACCGGATCGCCTGGGAATGGCTCGACGACGGCCAGGCGCTGC
GCACGCGCCAGGTCTGCCAGTCGGAGCTGCGCCATCCGCAGACCGGCGAGACGGTCTGGTTCAACCAGGCCCATCTGTTC
CACGTCACCAACCTGCCGGAAGGCGTGCGCGAGGCGATGCTCGAAGTCGTCGAGCCGGAGCGCCTGCCGCGCAACACCTA
TTTCGGCGACGGCACGCCGATCGACGCCGCGATGCTCGACGAGATCCGCGCCGTCTATCGCGACACGATGCTGTCGTTCC
CATGGCGGGCAGCCGACCTCCTGCTGCTCGACAACCTGCTGATGTCGCACGGCCGCGCGCCGTTCGCGGGCCAGCGCCGC
GTGCTTGGTGGCGATGACGCGCTGACGTGCGTGCCGCCAGCCGGCGCCGCGCCCCGCCCGGGCGCGGCGCATGCCGGCGC
GGCCGCCGGCCCGTGCGCCGGGCGGCCGCTTGCCGTTCCGAAACCGAACCTCGAAGAGTGA

Upstream 100 bases:

>100_bases
CCGAACCCGAACCGGTACTCGCGCGCGTGGCCTCGTCGCTGGCGCGCGCGCTCGCCGGGCCGGCGCCGGCCGCGTTGCCG
ACGGAGGCAGGATGGACGCA

Downstream 100 bases:

>100_bases
ACCTGTGAGCGAAGTGTCGAACGATCTGCTGTCGATTTCGACGGCCTATGTCGCCCTGCCGCCCGAGAAGCGCGCCGTGT
TCCGCGGCCGTCTGCGCGAG

Product: SyrP protein

Products: NA

Alternate protein names: SyrP Protein; SyrP-Like Protein; Non-Ribosomal Peptide Synthetase; Regulatory Protein; Regulatory Protein B; Amino Acid Adenylation Domain Protein; Taurine Catabolism Dioxygenase TauD/TfdA Family; Amino Acid Adenylation Domain-Containing Protein; Pyoverdine Biosynthesis Regulatory Gene; Condensation Domain-Containing Protein; Taurine Catabolism Dioxygenase TauD TfdA Family; Taurine Catabolism Dioxygenase Taud/Tfda; SyrP-Like Regulatory Protein; NRPS-Like Protein; Peptide Synthase; Syringomycin Biosynthesis; Oxidoreductase; Clavaminic Acid Synthetase-Like Protein; Pyoverdine Biosynthesis Regulatory Gene SyrP-Like; Non Ribosomal Peptide Synthase Antibiotic Synthesis; Multi-Domain Non-Ribosomal Peptide Synthetase; Syrp Like Protein Albicidin Biosynthesis Regulation; Regulatory Protein SyrP-Like; Syringomycin Biosynthesis ; Pyoverdine Biosynthesis Regulatory Protein SyrP-Like; Syringomycin Synthesis Regulator SyrP

Number of amino acids: Translated: 366; Mature: 365

Protein sequence:

>366_residues
MTTAHAAVALEFGELEQNGTRLVVVSPAAGEAAAPPLEAALGGELAAFVAREKTRHGGVLLRGFAPVGPAGFERCAARFG
EPIREYEFGSTPRSRVDNGVFSSTEYPANQWIDQHNEQSYTLKWPGSIGFYCEIAAEAGGATPVADSRLVYARLDPALRR
RFAEHGVMYVRNYGNGLDLSWEQVFGTEQRAEVERYCAANRIAWEWLDDGQALRTRQVCQSELRHPQTGETVWFNQAHLF
HVTNLPEGVREAMLEVVEPERLPRNTYFGDGTPIDAAMLDEIRAVYRDTMLSFPWRAADLLLLDNLLMSHGRAPFAGQRR
VLGGDDALTCVPPAGAAPRPGAAHAGAAAGPCAGRPLAVPKPNLEE

Sequences:

>Translated_366_residues
MTTAHAAVALEFGELEQNGTRLVVVSPAAGEAAAPPLEAALGGELAAFVAREKTRHGGVLLRGFAPVGPAGFERCAARFG
EPIREYEFGSTPRSRVDNGVFSSTEYPANQWIDQHNEQSYTLKWPGSIGFYCEIAAEAGGATPVADSRLVYARLDPALRR
RFAEHGVMYVRNYGNGLDLSWEQVFGTEQRAEVERYCAANRIAWEWLDDGQALRTRQVCQSELRHPQTGETVWFNQAHLF
HVTNLPEGVREAMLEVVEPERLPRNTYFGDGTPIDAAMLDEIRAVYRDTMLSFPWRAADLLLLDNLLMSHGRAPFAGQRR
VLGGDDALTCVPPAGAAPRPGAAHAGAAAGPCAGRPLAVPKPNLEE
>Mature_365_residues
TTAHAAVALEFGELEQNGTRLVVVSPAAGEAAAPPLEAALGGELAAFVAREKTRHGGVLLRGFAPVGPAGFERCAARFGE
PIREYEFGSTPRSRVDNGVFSSTEYPANQWIDQHNEQSYTLKWPGSIGFYCEIAAEAGGATPVADSRLVYARLDPALRRR
FAEHGVMYVRNYGNGLDLSWEQVFGTEQRAEVERYCAANRIAWEWLDDGQALRTRQVCQSELRHPQTGETVWFNQAHLFH
VTNLPEGVREAMLEVVEPERLPRNTYFGDGTPIDAAMLDEIRAVYRDTMLSFPWRAADLLLLDNLLMSHGRAPFAGQRRV
LGGDDALTCVPPAGAAPRPGAAHAGAAAGPCAGRPLAVPKPNLEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39877; Mature: 39746

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTAHAAVALEFGELEQNGTRLVVVSPAAGEAAAPPLEAALGGELAAFVAREKTRHGGVL
CCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCEE
LRGFAPVGPAGFERCAARFGEPIREYEFGSTPRSRVDNGVFSSTEYPANQWIDQHNEQSY
EECCCCCCHHHHHHHHHHHCCHHHHHCCCCCCHHHHCCCCCCCCCCCHHHHHHHCCCCEE
TLKWPGSIGFYCEIAAEAGGATPVADSRLVYARLDPALRRRFAEHGVMYVRNYGNGLDLS
EEECCCCCCEEEEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHCCEEEEEECCCCCCCC
WEQVFGTEQRAEVERYCAANRIAWEWLDDGQALRTRQVCQSELRHPQTGETVWFNQAHLF
HHHHHCCHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCEEEE
HVTNLPEGVREAMLEVVEPERLPRNTYFGDGTPIDAAMLDEIRAVYRDTMLSFPWRAADL
EECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHH
LLLDNLLMSHGRAPFAGQRRVLGGDDALTCVPPAGAAPRPGAAHAGAAAGPCAGRPLAVP
HHHHHHHHHCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KPNLEE
CCCCCC
>Mature Secondary Structure 
TTAHAAVALEFGELEQNGTRLVVVSPAAGEAAAPPLEAALGGELAAFVAREKTRHGGVL
CCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCEE
LRGFAPVGPAGFERCAARFGEPIREYEFGSTPRSRVDNGVFSSTEYPANQWIDQHNEQSY
EECCCCCCHHHHHHHHHHHCCHHHHHCCCCCCHHHHCCCCCCCCCCCHHHHHHHCCCCEE
TLKWPGSIGFYCEIAAEAGGATPVADSRLVYARLDPALRRRFAEHGVMYVRNYGNGLDLS
EEECCCCCCEEEEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHCCEEEEEECCCCCCCC
WEQVFGTEQRAEVERYCAANRIAWEWLDDGQALRTRQVCQSELRHPQTGETVWFNQAHLF
HHHHHCCHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCEEEE
HVTNLPEGVREAMLEVVEPERLPRNTYFGDGTPIDAAMLDEIRAVYRDTMLSFPWRAADL
EECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHH
LLLDNLLMSHGRAPFAGQRRVLGGDDALTCVPPAGAAPRPGAAHAGAAAGPCAGRPLAVP
HHHHHHHHHCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KPNLEE
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA