| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is plcN [H]
Identifier: 238024372
GI number: 238024372
Start: 1184977
End: 1187244
Strand: Reverse
Name: plcN [H]
Synonym: bglu_2g09650
Alternate gene names: 238024372
Gene position: 1187244-1184977 (Counterclockwise)
Preceding gene: 238024373
Following gene: 238024371
Centisome position: 41.99
GC content: 68.92
Gene sequence:
>2268_bases ATGACATTCAGCTCTTCCAAACGCCGGTTCCTGAAGACCTCGCTCGGCGGCGCGGCGGCCGCCGCCACGCTGTCGGCGTT TCCGCCGGCGATCCGGCGCGCGCTCGCGATCGACGCCAACAACGCCACCGGCACCATCCAGGACGTGCAGCACGTGGTGC TGCTGATGCTCGAGAACCGCTCGTTCGACAGCTACTTCGGCACCTTCCGCGGCGTGCGCGGCTACGGCGACCGCTTCGCG ATTCCGTCGCCGGGCGCCGCCAACATCTTCCACCAGAGCTATACGAAGGCCGGCGTGACCAGCACGCTCACGCCGTATCA CCTCGACGAGACGCAGGGCAACGCGCTGCGCGCCGGGGGCACGCCGCACACCTGGAACGATGCGCAGGCGGCCTGGGACA ACGGCCGCATGTCGGCCTGGCCCACCGCCAAGACCCCGCTCTCGCTCGGCTACTACGAGAACGCCGAGGTGCCGTTCCAT CGCGCGCTGGCCGACGCGTTCACGCTGTGCGACGCCTACCACTGCGGCATGCACACCGGCACGATCGCCAACCGCCTGTT CTACTGGAGCGGCACCAACGGCCCGAGCGGGATCAGCCCGGCCGACGGCAGCGCGGTGCGCGTGGCGGCGCTCAACAACG AGTTCAACGGCGGCAACGACATCGGCCCCTCCACCTCGGGCTGGACCTGGACCACCTATGCGGACCGCTTGCAGGCGGCA GGCGTGGGCTGGAAGGTGTACCAGAGCCTGGTCGACAACTTCGGCTGCAACGAGATGATGGGCTTCCGCCACTGGCGGGC GGCGATCGAGCAGATGCCGGCCGCGCGGCGGCCGGTGTACGTCTCGACCGTGGACATCAACCAGGCCGTGACCGCGGCCG GCCCGTTCTACGATCCCGCCATCGACGACGCGCTGAGCCCGCTCGCCAAGGGCTTCGGCAATACCATGCCGCAGGGCTTC CTCGAAACCTTCCGCGACGACATCCAGAACGGCACGCTGCCTTCCGTGTCGTGGATCATTCCGCCCTCGTACTACAGCGA GCATCCGGGGCCGTCGAGCCCCACGCAGGGCGGCTGGTACATTCAGGAGGTGCTCGACGCGCTGACCGCGAATCCGGACG TGTGGAGCAAGACCGTGCTGATCGTGAACTACGACGAGAACGACGGCTTCTTCGACCACTTGCCGCCGCCGAGCGCCCCC TCGCACAACCCCGACGGCACGCTGGCGGGCGGCAGCACGCTGGCCGATGCCGAGATGGCGCCGGAGTACCACAACTACAC GCCGGCCACCGCCAACCAGCCCGCCATCGACGGCCGCCCTTACGGCCCCGGCCCGCGCGTGCCGATGTGGGTGATCTCGC CGTGGAGCCGCGGCGGCTTCGTCAATTCACAGGTATTCGACCACACCTCCACGCTGCGCTTCCTCGAGCAGCGTTTCGGC GTGGCCGAGCCGCAGATCAGCCGCTACCGCCGCACCGTCTGCGGCGATCTCACCTCGTGCTTCAACTTCGTGTCGCCCAA CGACGGCGCGCTGCCGACGCTGTCGGGCCGCACCACCAAGGTCGGCGCCGATTCGCTGGCCGCCTCGCAGGCCGCCGCGC ACGCGATTCCCGTGCCGAGCGCCTCCGCCACTTCGGCGCTGCCCGCGCAGGCCACCGGCACGCGGCCGTCGCGCGCGCTG CCTTACGAATTGCATACCACCGCGCATCCGTCGAGCGCCGTCATCACGCTCGAATTCATGAACGCGAGCCTCGCGCAGAC GGGGGCGGTGTTCCACGTCTACGATCGCCTTCACCTGGACCGGATTCCGCGCCGCTACGTGGTGGAGGCGGGCAAATCGC TGAGCGGCAGCTGGACGCCGGCTGCCGCCGACCAAGGCAGCTACGATCTGTGGGTGCTCGGGCCGAACGGCTATCACCGC GAATACGTCGGCAACCTGGGGGATATCGCGGCCGGCGCGGACCCCGAAGTGCAGATCTGCTACCAGCCTTGCGATGCCTC GGCGCTGAGCGTGAAGCTGTTCAATCGCGGCAGCACGCCGACCACCTTCACGGTGACGGCGAACGCCTATCGCAGCGACG GCCCCTGGACGCTCGCGGTCGCCGCCAACGGCTCGGGCGAGTTGAGCTGGAGCGTCGCCGAACATGGCAACTGGTATGAC TTCACGGTCAGCAGCAGCAATGCGCCGAGCTTCAAGCGGCGCTTCGCGGGACGCATCGAGACCGGTCGGGACTCGGTATC CGACCCGGCGATGGGCCTGAGCAGCTGA
Upstream 100 bases:
>100_bases CAAGCGACGTCGGCGACCACCCCGGCCCCGGCCGCCTGCTCGACGCGCCACTGCGCCCCGGCTCCCTGAGCCGCGCCTTC TTTATCCGGACGCTTCTCCA
Downstream 100 bases:
>100_bases GTCGGCGGCGGGTCGAGCGCTCGTTCGCGCCACGCGCGTCGGGCCGGCCCGCCAGGTCTTCCGGTTTCGGCGCCAGCCGG CGCGCCGCGTGCCGGCCTGC
Product: phospholipase C
Products: NA
Alternate protein names: PLC-N; Phosphatidylcholine cholinephosphohydrolase; Phosphatidylcholine-hydrolyzing phospholipase C; PC-PLC [H]
Number of amino acids: Translated: 755; Mature: 754
Protein sequence:
>755_residues MTFSSSKRRFLKTSLGGAAAAATLSAFPPAIRRALAIDANNATGTIQDVQHVVLLMLENRSFDSYFGTFRGVRGYGDRFA IPSPGAANIFHQSYTKAGVTSTLTPYHLDETQGNALRAGGTPHTWNDAQAAWDNGRMSAWPTAKTPLSLGYYENAEVPFH RALADAFTLCDAYHCGMHTGTIANRLFYWSGTNGPSGISPADGSAVRVAALNNEFNGGNDIGPSTSGWTWTTYADRLQAA GVGWKVYQSLVDNFGCNEMMGFRHWRAAIEQMPAARRPVYVSTVDINQAVTAAGPFYDPAIDDALSPLAKGFGNTMPQGF LETFRDDIQNGTLPSVSWIIPPSYYSEHPGPSSPTQGGWYIQEVLDALTANPDVWSKTVLIVNYDENDGFFDHLPPPSAP SHNPDGTLAGGSTLADAEMAPEYHNYTPATANQPAIDGRPYGPGPRVPMWVISPWSRGGFVNSQVFDHTSTLRFLEQRFG VAEPQISRYRRTVCGDLTSCFNFVSPNDGALPTLSGRTTKVGADSLAASQAAAHAIPVPSASATSALPAQATGTRPSRAL PYELHTTAHPSSAVITLEFMNASLAQTGAVFHVYDRLHLDRIPRRYVVEAGKSLSGSWTPAAADQGSYDLWVLGPNGYHR EYVGNLGDIAAGADPEVQICYQPCDASALSVKLFNRGSTPTTFTVTANAYRSDGPWTLAVAANGSGELSWSVAEHGNWYD FTVSSSNAPSFKRRFAGRIETGRDSVSDPAMGLSS
Sequences:
>Translated_755_residues MTFSSSKRRFLKTSLGGAAAAATLSAFPPAIRRALAIDANNATGTIQDVQHVVLLMLENRSFDSYFGTFRGVRGYGDRFA IPSPGAANIFHQSYTKAGVTSTLTPYHLDETQGNALRAGGTPHTWNDAQAAWDNGRMSAWPTAKTPLSLGYYENAEVPFH RALADAFTLCDAYHCGMHTGTIANRLFYWSGTNGPSGISPADGSAVRVAALNNEFNGGNDIGPSTSGWTWTTYADRLQAA GVGWKVYQSLVDNFGCNEMMGFRHWRAAIEQMPAARRPVYVSTVDINQAVTAAGPFYDPAIDDALSPLAKGFGNTMPQGF LETFRDDIQNGTLPSVSWIIPPSYYSEHPGPSSPTQGGWYIQEVLDALTANPDVWSKTVLIVNYDENDGFFDHLPPPSAP SHNPDGTLAGGSTLADAEMAPEYHNYTPATANQPAIDGRPYGPGPRVPMWVISPWSRGGFVNSQVFDHTSTLRFLEQRFG VAEPQISRYRRTVCGDLTSCFNFVSPNDGALPTLSGRTTKVGADSLAASQAAAHAIPVPSASATSALPAQATGTRPSRAL PYELHTTAHPSSAVITLEFMNASLAQTGAVFHVYDRLHLDRIPRRYVVEAGKSLSGSWTPAAADQGSYDLWVLGPNGYHR EYVGNLGDIAAGADPEVQICYQPCDASALSVKLFNRGSTPTTFTVTANAYRSDGPWTLAVAANGSGELSWSVAEHGNWYD FTVSSSNAPSFKRRFAGRIETGRDSVSDPAMGLSS >Mature_754_residues TFSSSKRRFLKTSLGGAAAAATLSAFPPAIRRALAIDANNATGTIQDVQHVVLLMLENRSFDSYFGTFRGVRGYGDRFAI PSPGAANIFHQSYTKAGVTSTLTPYHLDETQGNALRAGGTPHTWNDAQAAWDNGRMSAWPTAKTPLSLGYYENAEVPFHR ALADAFTLCDAYHCGMHTGTIANRLFYWSGTNGPSGISPADGSAVRVAALNNEFNGGNDIGPSTSGWTWTTYADRLQAAG VGWKVYQSLVDNFGCNEMMGFRHWRAAIEQMPAARRPVYVSTVDINQAVTAAGPFYDPAIDDALSPLAKGFGNTMPQGFL ETFRDDIQNGTLPSVSWIIPPSYYSEHPGPSSPTQGGWYIQEVLDALTANPDVWSKTVLIVNYDENDGFFDHLPPPSAPS HNPDGTLAGGSTLADAEMAPEYHNYTPATANQPAIDGRPYGPGPRVPMWVISPWSRGGFVNSQVFDHTSTLRFLEQRFGV AEPQISRYRRTVCGDLTSCFNFVSPNDGALPTLSGRTTKVGADSLAASQAAAHAIPVPSASATSALPAQATGTRPSRALP YELHTTAHPSSAVITLEFMNASLAQTGAVFHVYDRLHLDRIPRRYVVEAGKSLSGSWTPAAADQGSYDLWVLGPNGYHRE YVGNLGDIAAGADPEVQICYQPCDASALSVKLFNRGSTPTTFTVTANAYRSDGPWTLAVAANGSGELSWSVAEHGNWYDF TVSSSNAPSFKRRFAGRIETGRDSVSDPAMGLSS
Specific function: Hydrolyzes phosphatidylserine as well as phosphatidylcholine [H]
COG id: COG3511
COG function: function code M; Phospholipase C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial phospholipase C family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007312 - InterPro: IPR008475 - InterPro: IPR017767 - InterPro: IPR006311 [H]
Pfam domain/function: PF05506 DUF756; PF04185 Phosphoesterase [H]
EC number: =3.1.4.3 [H]
Molecular weight: Translated: 81046; Mature: 80915
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFSSSKRRFLKTSLGGAAAAATLSAFPPAIRRALAIDANNATGTIQDVQHVVLLMLENR CCCCCCHHHHHHHHCCCHHHHHHHHHCCHHHHHEEEEECCCCCCCHHHHHHHHHHHCCCC SFDSYFGTFRGVRGYGDRFAIPSPGAANIFHQSYTKAGVTSTLTPYHLDETQGNALRAGG CCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCCCCEEECCC TPHTWNDAQAAWDNGRMSAWPTAKTPLSLGYYENAEVPFHRALADAFTLCDAYHCGMHTG CCCCCCCCHHHCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC TIANRLFYWSGTNGPSGISPADGSAVRVAALNNEFNGGNDIGPSTSGWTWTTYADRLQAA CHHCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEHHHHHHHHC GVGWKVYQSLVDNFGCNEMMGFRHWRAAIEQMPAARRPVYVSTVDINQAVTAAGPFYDPA CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHCCCCCCCHH IDDALSPLAKGFGNTMPQGFLETFRDDIQNGTLPSVSWIIPPSYYSEHPGPSSPTQGGWY HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEECCHHHCCCCCCCCCCCCCHH IQEVLDALTANPDVWSKTVLIVNYDENDGFFDHLPPPSAPSHNPDGTLAGGSTLADAEMA HHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCC PEYHNYTPATANQPAIDGRPYGPGPRVPMWVISPWSRGGFVNSQVFDHTSTLRFLEQRFG CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCC VAEPQISRYRRTVCGDLTSCFNFVSPNDGALPTLSGRTTKVGADSLAASQAAAHAIPVPS CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHCCCCCC ASATSALPAQATGTRPSRALPYELHTTAHPSSAVITLEFMNASLAQTGAVFHVYDRLHLD CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEECCCHHHHCCCEEEEHHHHHHH RIPRRYVVEAGKSLSGSWTPAAADQGSYDLWVLGPNGYHREYVGNLGDIAAGADPEVQIC HCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHCCCHHHCCCCCCCEEEE YQPCDASALSVKLFNRGSTPTTFTVTANAYRSDGPWTLAVAANGSGELSWSVAEHGNWYD EECCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCEEEEEEECCCCCEEEEEECCCCEEE FTVSSSNAPSFKRRFAGRIETGRDSVSDPAMGLSS EEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TFSSSKRRFLKTSLGGAAAAATLSAFPPAIRRALAIDANNATGTIQDVQHVVLLMLENR CCCCCHHHHHHHHCCCHHHHHHHHHCCHHHHHEEEEECCCCCCCHHHHHHHHHHHCCCC SFDSYFGTFRGVRGYGDRFAIPSPGAANIFHQSYTKAGVTSTLTPYHLDETQGNALRAGG CCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCCCCEEECCC TPHTWNDAQAAWDNGRMSAWPTAKTPLSLGYYENAEVPFHRALADAFTLCDAYHCGMHTG CCCCCCCCHHHCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC TIANRLFYWSGTNGPSGISPADGSAVRVAALNNEFNGGNDIGPSTSGWTWTTYADRLQAA CHHCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEHHHHHHHHC GVGWKVYQSLVDNFGCNEMMGFRHWRAAIEQMPAARRPVYVSTVDINQAVTAAGPFYDPA CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHCCCCCCCHH IDDALSPLAKGFGNTMPQGFLETFRDDIQNGTLPSVSWIIPPSYYSEHPGPSSPTQGGWY HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEECCHHHCCCCCCCCCCCCCHH IQEVLDALTANPDVWSKTVLIVNYDENDGFFDHLPPPSAPSHNPDGTLAGGSTLADAEMA HHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCC PEYHNYTPATANQPAIDGRPYGPGPRVPMWVISPWSRGGFVNSQVFDHTSTLRFLEQRFG CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCC VAEPQISRYRRTVCGDLTSCFNFVSPNDGALPTLSGRTTKVGADSLAASQAAAHAIPVPS CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHCCCCCC ASATSALPAQATGTRPSRALPYELHTTAHPSSAVITLEFMNASLAQTGAVFHVYDRLHLD CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEECCCHHHHCCCEEEEHHHHHHH RIPRRYVVEAGKSLSGSWTPAAADQGSYDLWVLGPNGYHREYVGNLGDIAAGADPEVQIC HCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHCCCHHHCCCCCCCEEEE YQPCDASALSVKLFNRGSTPTTFTVTANAYRSDGPWTLAVAANGSGELSWSVAEHGNWYD EECCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCEEEEEEECCCCCEEEEEECCCCEEE FTVSSSNAPSFKRRFAGRIETGRDSVSDPAMGLSS EEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2120196; 10984043 [H]