Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

Click here to switch to the map view.

The map label for this gene is plcN [H]

Identifier: 238024372

GI number: 238024372

Start: 1184977

End: 1187244

Strand: Reverse

Name: plcN [H]

Synonym: bglu_2g09650

Alternate gene names: 238024372

Gene position: 1187244-1184977 (Counterclockwise)

Preceding gene: 238024373

Following gene: 238024371

Centisome position: 41.99

GC content: 68.92

Gene sequence:

>2268_bases
ATGACATTCAGCTCTTCCAAACGCCGGTTCCTGAAGACCTCGCTCGGCGGCGCGGCGGCCGCCGCCACGCTGTCGGCGTT
TCCGCCGGCGATCCGGCGCGCGCTCGCGATCGACGCCAACAACGCCACCGGCACCATCCAGGACGTGCAGCACGTGGTGC
TGCTGATGCTCGAGAACCGCTCGTTCGACAGCTACTTCGGCACCTTCCGCGGCGTGCGCGGCTACGGCGACCGCTTCGCG
ATTCCGTCGCCGGGCGCCGCCAACATCTTCCACCAGAGCTATACGAAGGCCGGCGTGACCAGCACGCTCACGCCGTATCA
CCTCGACGAGACGCAGGGCAACGCGCTGCGCGCCGGGGGCACGCCGCACACCTGGAACGATGCGCAGGCGGCCTGGGACA
ACGGCCGCATGTCGGCCTGGCCCACCGCCAAGACCCCGCTCTCGCTCGGCTACTACGAGAACGCCGAGGTGCCGTTCCAT
CGCGCGCTGGCCGACGCGTTCACGCTGTGCGACGCCTACCACTGCGGCATGCACACCGGCACGATCGCCAACCGCCTGTT
CTACTGGAGCGGCACCAACGGCCCGAGCGGGATCAGCCCGGCCGACGGCAGCGCGGTGCGCGTGGCGGCGCTCAACAACG
AGTTCAACGGCGGCAACGACATCGGCCCCTCCACCTCGGGCTGGACCTGGACCACCTATGCGGACCGCTTGCAGGCGGCA
GGCGTGGGCTGGAAGGTGTACCAGAGCCTGGTCGACAACTTCGGCTGCAACGAGATGATGGGCTTCCGCCACTGGCGGGC
GGCGATCGAGCAGATGCCGGCCGCGCGGCGGCCGGTGTACGTCTCGACCGTGGACATCAACCAGGCCGTGACCGCGGCCG
GCCCGTTCTACGATCCCGCCATCGACGACGCGCTGAGCCCGCTCGCCAAGGGCTTCGGCAATACCATGCCGCAGGGCTTC
CTCGAAACCTTCCGCGACGACATCCAGAACGGCACGCTGCCTTCCGTGTCGTGGATCATTCCGCCCTCGTACTACAGCGA
GCATCCGGGGCCGTCGAGCCCCACGCAGGGCGGCTGGTACATTCAGGAGGTGCTCGACGCGCTGACCGCGAATCCGGACG
TGTGGAGCAAGACCGTGCTGATCGTGAACTACGACGAGAACGACGGCTTCTTCGACCACTTGCCGCCGCCGAGCGCCCCC
TCGCACAACCCCGACGGCACGCTGGCGGGCGGCAGCACGCTGGCCGATGCCGAGATGGCGCCGGAGTACCACAACTACAC
GCCGGCCACCGCCAACCAGCCCGCCATCGACGGCCGCCCTTACGGCCCCGGCCCGCGCGTGCCGATGTGGGTGATCTCGC
CGTGGAGCCGCGGCGGCTTCGTCAATTCACAGGTATTCGACCACACCTCCACGCTGCGCTTCCTCGAGCAGCGTTTCGGC
GTGGCCGAGCCGCAGATCAGCCGCTACCGCCGCACCGTCTGCGGCGATCTCACCTCGTGCTTCAACTTCGTGTCGCCCAA
CGACGGCGCGCTGCCGACGCTGTCGGGCCGCACCACCAAGGTCGGCGCCGATTCGCTGGCCGCCTCGCAGGCCGCCGCGC
ACGCGATTCCCGTGCCGAGCGCCTCCGCCACTTCGGCGCTGCCCGCGCAGGCCACCGGCACGCGGCCGTCGCGCGCGCTG
CCTTACGAATTGCATACCACCGCGCATCCGTCGAGCGCCGTCATCACGCTCGAATTCATGAACGCGAGCCTCGCGCAGAC
GGGGGCGGTGTTCCACGTCTACGATCGCCTTCACCTGGACCGGATTCCGCGCCGCTACGTGGTGGAGGCGGGCAAATCGC
TGAGCGGCAGCTGGACGCCGGCTGCCGCCGACCAAGGCAGCTACGATCTGTGGGTGCTCGGGCCGAACGGCTATCACCGC
GAATACGTCGGCAACCTGGGGGATATCGCGGCCGGCGCGGACCCCGAAGTGCAGATCTGCTACCAGCCTTGCGATGCCTC
GGCGCTGAGCGTGAAGCTGTTCAATCGCGGCAGCACGCCGACCACCTTCACGGTGACGGCGAACGCCTATCGCAGCGACG
GCCCCTGGACGCTCGCGGTCGCCGCCAACGGCTCGGGCGAGTTGAGCTGGAGCGTCGCCGAACATGGCAACTGGTATGAC
TTCACGGTCAGCAGCAGCAATGCGCCGAGCTTCAAGCGGCGCTTCGCGGGACGCATCGAGACCGGTCGGGACTCGGTATC
CGACCCGGCGATGGGCCTGAGCAGCTGA

Upstream 100 bases:

>100_bases
CAAGCGACGTCGGCGACCACCCCGGCCCCGGCCGCCTGCTCGACGCGCCACTGCGCCCCGGCTCCCTGAGCCGCGCCTTC
TTTATCCGGACGCTTCTCCA

Downstream 100 bases:

>100_bases
GTCGGCGGCGGGTCGAGCGCTCGTTCGCGCCACGCGCGTCGGGCCGGCCCGCCAGGTCTTCCGGTTTCGGCGCCAGCCGG
CGCGCCGCGTGCCGGCCTGC

Product: phospholipase C

Products: NA

Alternate protein names: PLC-N; Phosphatidylcholine cholinephosphohydrolase; Phosphatidylcholine-hydrolyzing phospholipase C; PC-PLC [H]

Number of amino acids: Translated: 755; Mature: 754

Protein sequence:

>755_residues
MTFSSSKRRFLKTSLGGAAAAATLSAFPPAIRRALAIDANNATGTIQDVQHVVLLMLENRSFDSYFGTFRGVRGYGDRFA
IPSPGAANIFHQSYTKAGVTSTLTPYHLDETQGNALRAGGTPHTWNDAQAAWDNGRMSAWPTAKTPLSLGYYENAEVPFH
RALADAFTLCDAYHCGMHTGTIANRLFYWSGTNGPSGISPADGSAVRVAALNNEFNGGNDIGPSTSGWTWTTYADRLQAA
GVGWKVYQSLVDNFGCNEMMGFRHWRAAIEQMPAARRPVYVSTVDINQAVTAAGPFYDPAIDDALSPLAKGFGNTMPQGF
LETFRDDIQNGTLPSVSWIIPPSYYSEHPGPSSPTQGGWYIQEVLDALTANPDVWSKTVLIVNYDENDGFFDHLPPPSAP
SHNPDGTLAGGSTLADAEMAPEYHNYTPATANQPAIDGRPYGPGPRVPMWVISPWSRGGFVNSQVFDHTSTLRFLEQRFG
VAEPQISRYRRTVCGDLTSCFNFVSPNDGALPTLSGRTTKVGADSLAASQAAAHAIPVPSASATSALPAQATGTRPSRAL
PYELHTTAHPSSAVITLEFMNASLAQTGAVFHVYDRLHLDRIPRRYVVEAGKSLSGSWTPAAADQGSYDLWVLGPNGYHR
EYVGNLGDIAAGADPEVQICYQPCDASALSVKLFNRGSTPTTFTVTANAYRSDGPWTLAVAANGSGELSWSVAEHGNWYD
FTVSSSNAPSFKRRFAGRIETGRDSVSDPAMGLSS

Sequences:

>Translated_755_residues
MTFSSSKRRFLKTSLGGAAAAATLSAFPPAIRRALAIDANNATGTIQDVQHVVLLMLENRSFDSYFGTFRGVRGYGDRFA
IPSPGAANIFHQSYTKAGVTSTLTPYHLDETQGNALRAGGTPHTWNDAQAAWDNGRMSAWPTAKTPLSLGYYENAEVPFH
RALADAFTLCDAYHCGMHTGTIANRLFYWSGTNGPSGISPADGSAVRVAALNNEFNGGNDIGPSTSGWTWTTYADRLQAA
GVGWKVYQSLVDNFGCNEMMGFRHWRAAIEQMPAARRPVYVSTVDINQAVTAAGPFYDPAIDDALSPLAKGFGNTMPQGF
LETFRDDIQNGTLPSVSWIIPPSYYSEHPGPSSPTQGGWYIQEVLDALTANPDVWSKTVLIVNYDENDGFFDHLPPPSAP
SHNPDGTLAGGSTLADAEMAPEYHNYTPATANQPAIDGRPYGPGPRVPMWVISPWSRGGFVNSQVFDHTSTLRFLEQRFG
VAEPQISRYRRTVCGDLTSCFNFVSPNDGALPTLSGRTTKVGADSLAASQAAAHAIPVPSASATSALPAQATGTRPSRAL
PYELHTTAHPSSAVITLEFMNASLAQTGAVFHVYDRLHLDRIPRRYVVEAGKSLSGSWTPAAADQGSYDLWVLGPNGYHR
EYVGNLGDIAAGADPEVQICYQPCDASALSVKLFNRGSTPTTFTVTANAYRSDGPWTLAVAANGSGELSWSVAEHGNWYD
FTVSSSNAPSFKRRFAGRIETGRDSVSDPAMGLSS
>Mature_754_residues
TFSSSKRRFLKTSLGGAAAAATLSAFPPAIRRALAIDANNATGTIQDVQHVVLLMLENRSFDSYFGTFRGVRGYGDRFAI
PSPGAANIFHQSYTKAGVTSTLTPYHLDETQGNALRAGGTPHTWNDAQAAWDNGRMSAWPTAKTPLSLGYYENAEVPFHR
ALADAFTLCDAYHCGMHTGTIANRLFYWSGTNGPSGISPADGSAVRVAALNNEFNGGNDIGPSTSGWTWTTYADRLQAAG
VGWKVYQSLVDNFGCNEMMGFRHWRAAIEQMPAARRPVYVSTVDINQAVTAAGPFYDPAIDDALSPLAKGFGNTMPQGFL
ETFRDDIQNGTLPSVSWIIPPSYYSEHPGPSSPTQGGWYIQEVLDALTANPDVWSKTVLIVNYDENDGFFDHLPPPSAPS
HNPDGTLAGGSTLADAEMAPEYHNYTPATANQPAIDGRPYGPGPRVPMWVISPWSRGGFVNSQVFDHTSTLRFLEQRFGV
AEPQISRYRRTVCGDLTSCFNFVSPNDGALPTLSGRTTKVGADSLAASQAAAHAIPVPSASATSALPAQATGTRPSRALP
YELHTTAHPSSAVITLEFMNASLAQTGAVFHVYDRLHLDRIPRRYVVEAGKSLSGSWTPAAADQGSYDLWVLGPNGYHRE
YVGNLGDIAAGADPEVQICYQPCDASALSVKLFNRGSTPTTFTVTANAYRSDGPWTLAVAANGSGELSWSVAEHGNWYDF
TVSSSNAPSFKRRFAGRIETGRDSVSDPAMGLSS

Specific function: Hydrolyzes phosphatidylserine as well as phosphatidylcholine [H]

COG id: COG3511

COG function: function code M; Phospholipase C

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial phospholipase C family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007312
- InterPro:   IPR008475
- InterPro:   IPR017767
- InterPro:   IPR006311 [H]

Pfam domain/function: PF05506 DUF756; PF04185 Phosphoesterase [H]

EC number: =3.1.4.3 [H]

Molecular weight: Translated: 81046; Mature: 80915

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFSSSKRRFLKTSLGGAAAAATLSAFPPAIRRALAIDANNATGTIQDVQHVVLLMLENR
CCCCCCHHHHHHHHCCCHHHHHHHHHCCHHHHHEEEEECCCCCCCHHHHHHHHHHHCCCC
SFDSYFGTFRGVRGYGDRFAIPSPGAANIFHQSYTKAGVTSTLTPYHLDETQGNALRAGG
CCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCCCCEEECCC
TPHTWNDAQAAWDNGRMSAWPTAKTPLSLGYYENAEVPFHRALADAFTLCDAYHCGMHTG
CCCCCCCCHHHCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
TIANRLFYWSGTNGPSGISPADGSAVRVAALNNEFNGGNDIGPSTSGWTWTTYADRLQAA
CHHCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEHHHHHHHHC
GVGWKVYQSLVDNFGCNEMMGFRHWRAAIEQMPAARRPVYVSTVDINQAVTAAGPFYDPA
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHCCCCCCCHH
IDDALSPLAKGFGNTMPQGFLETFRDDIQNGTLPSVSWIIPPSYYSEHPGPSSPTQGGWY
HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEECCHHHCCCCCCCCCCCCCHH
IQEVLDALTANPDVWSKTVLIVNYDENDGFFDHLPPPSAPSHNPDGTLAGGSTLADAEMA
HHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCC
PEYHNYTPATANQPAIDGRPYGPGPRVPMWVISPWSRGGFVNSQVFDHTSTLRFLEQRFG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCC
VAEPQISRYRRTVCGDLTSCFNFVSPNDGALPTLSGRTTKVGADSLAASQAAAHAIPVPS
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHCCCCCC
ASATSALPAQATGTRPSRALPYELHTTAHPSSAVITLEFMNASLAQTGAVFHVYDRLHLD
CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEECCCHHHHCCCEEEEHHHHHHH
RIPRRYVVEAGKSLSGSWTPAAADQGSYDLWVLGPNGYHREYVGNLGDIAAGADPEVQIC
HCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHCCCHHHCCCCCCCEEEE
YQPCDASALSVKLFNRGSTPTTFTVTANAYRSDGPWTLAVAANGSGELSWSVAEHGNWYD
EECCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCEEEEEEECCCCCEEEEEECCCCEEE
FTVSSSNAPSFKRRFAGRIETGRDSVSDPAMGLSS
EEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TFSSSKRRFLKTSLGGAAAAATLSAFPPAIRRALAIDANNATGTIQDVQHVVLLMLENR
CCCCCHHHHHHHHCCCHHHHHHHHHCCHHHHHEEEEECCCCCCCHHHHHHHHHHHCCCC
SFDSYFGTFRGVRGYGDRFAIPSPGAANIFHQSYTKAGVTSTLTPYHLDETQGNALRAGG
CCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCCCCEEECCC
TPHTWNDAQAAWDNGRMSAWPTAKTPLSLGYYENAEVPFHRALADAFTLCDAYHCGMHTG
CCCCCCCCHHHCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
TIANRLFYWSGTNGPSGISPADGSAVRVAALNNEFNGGNDIGPSTSGWTWTTYADRLQAA
CHHCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEHHHHHHHHC
GVGWKVYQSLVDNFGCNEMMGFRHWRAAIEQMPAARRPVYVSTVDINQAVTAAGPFYDPA
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHCCCCCCCHH
IDDALSPLAKGFGNTMPQGFLETFRDDIQNGTLPSVSWIIPPSYYSEHPGPSSPTQGGWY
HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEECCHHHCCCCCCCCCCCCCHH
IQEVLDALTANPDVWSKTVLIVNYDENDGFFDHLPPPSAPSHNPDGTLAGGSTLADAEMA
HHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCC
PEYHNYTPATANQPAIDGRPYGPGPRVPMWVISPWSRGGFVNSQVFDHTSTLRFLEQRFG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCC
VAEPQISRYRRTVCGDLTSCFNFVSPNDGALPTLSGRTTKVGADSLAASQAAAHAIPVPS
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHCCCCCC
ASATSALPAQATGTRPSRALPYELHTTAHPSSAVITLEFMNASLAQTGAVFHVYDRLHLD
CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEECCCHHHHCCCEEEEHHHHHHH
RIPRRYVVEAGKSLSGSWTPAAADQGSYDLWVLGPNGYHREYVGNLGDIAAGADPEVQIC
HCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHCCCHHHCCCCCCCEEEE
YQPCDASALSVKLFNRGSTPTTFTVTANAYRSDGPWTLAVAANGSGELSWSVAEHGNWYD
EECCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCEEEEEEECCCCCEEEEEECCCCEEE
FTVSSSNAPSFKRRFAGRIETGRDSVSDPAMGLSS
EEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2120196; 10984043 [H]