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The map label for this gene is ydfM [H]

Identifier: 238024366

GI number: 238024366

Start: 1178016

End: 1179002

Strand: Direct

Name: ydfM [H]

Synonym: bglu_2g09590

Alternate gene names: 238024366

Gene position: 1178016-1179002 (Clockwise)

Preceding gene: 238024365

Following gene: 238024370

Centisome position: 41.67

GC content: 68.19

Gene sequence:

>987_bases
ATGCGACAATCCAACCCTGGACACACCGCCGAATTCCATTACGCCTTCTCCGGGGGACCCGCCATGACCAATGCCGCCTC
GCCCGAGTCGCAGCAGCTCGACGCCGGCCGGCGCAGCACGCTGATCAGCGCGGTCGTGAACGTGGTGCTGTCGCTGGCCC
AAGTCACGATCGGCCTGGCGGCGCACTCGCAGGCCTTGGTGTCGGACGGCATACATTCGCTGTCCGATCTCGTATCCGAT
TTCGTCGTGCTGATCGCGGGCTCGCAGAGCCGCAAGGGCCCGGATCGCGACCATCCCTATGGGCATCAGCGCTACGAGAC
CGCCGCCAGCCTGATCCTCGGGATGCTGCTGCTGGCGGTGGGCGGCGGCATGCTGTGGGCGGCAACGCGCAAGTTCGCCG
AGCCGTCCTCGATCGCCAGCGTGCATGCCGTCGCGCTATGGGTGGCGATGGCCGCCTTGGTGGCGAAGGAACTGTTGTTT
CGCTACATGCTGCGCGTGGCGAAACGGCTGCGCTCGAGCATGCTGGCCGCCAATGCCTGGCATGCCCGCTCCGATGCCGC
CTCGTCGCTGGTGGCCCTGGTCGGCATCGCCGGCAACCTGCTCGGCTATCCGATTCTCGACCCGGTGGCCGCGCTGGTCG
TCGGGTTGATGGTCATCCGCATGGGCGGCCAGTTCGCCTGGACGGCGATCAACGACCTGATGGATCGCGCCGTGGACGAC
GAGGAGGTGGCGCGCATCGGCGAGACGGTGGGCGCCACGCCGGGCGTGGCGGGCTTTCATGCGCTGCGGACCCGGAAAAT
GGGCGACATGATCCTGGTCGACGTGCATCTTGAGGTCGAGGCGAGCCTGTCGATCGTCGAGGGGCACGAGATCGCCACCG
CGGTCGAGAACAATCTGATGACGCGGCACCGTGTGCTCGGCGTCATGACGCACGTCGATCCGGTGGCGCCGAGCGGGCCG
CGCGTGGGGCGCCCGCGGCACGCCTGA

Upstream 100 bases:

>100_bases
CGGCCGCTTCCGGAATGCCGGGCCTGAAGAAAACCGAGACGCATTCCTATTTATTTTCAAAGCAAAAACAAGGGGTTATA
GCGGCGTTTCGGCAAGTGGA

Downstream 100 bases:

>100_bases
GGGCCGGCGGCCGTCGCGAGCGCGTCCTGGCGCAAGCGCCGGCCCGCGTTGCGTCCGCGCCCGGTGCGTTCCCGCAGCGC
GGCATTCGAGCCTGGCCGCG

Product: Cation diffusion facilitator family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MRQSNPGHTAEFHYAFSGGPAMTNAASPESQQLDAGRRSTLISAVVNVVLSLAQVTIGLAAHSQALVSDGIHSLSDLVSD
FVVLIAGSQSRKGPDRDHPYGHQRYETAASLILGMLLLAVGGGMLWAATRKFAEPSSIASVHAVALWVAMAALVAKELLF
RYMLRVAKRLRSSMLAANAWHARSDAASSLVALVGIAGNLLGYPILDPVAALVVGLMVIRMGGQFAWTAINDLMDRAVDD
EEVARIGETVGATPGVAGFHALRTRKMGDMILVDVHLEVEASLSIVEGHEIATAVENNLMTRHRVLGVMTHVDPVAPSGP
RVGRPRHA

Sequences:

>Translated_328_residues
MRQSNPGHTAEFHYAFSGGPAMTNAASPESQQLDAGRRSTLISAVVNVVLSLAQVTIGLAAHSQALVSDGIHSLSDLVSD
FVVLIAGSQSRKGPDRDHPYGHQRYETAASLILGMLLLAVGGGMLWAATRKFAEPSSIASVHAVALWVAMAALVAKELLF
RYMLRVAKRLRSSMLAANAWHARSDAASSLVALVGIAGNLLGYPILDPVAALVVGLMVIRMGGQFAWTAINDLMDRAVDD
EEVARIGETVGATPGVAGFHALRTRKMGDMILVDVHLEVEASLSIVEGHEIATAVENNLMTRHRVLGVMTHVDPVAPSGP
RVGRPRHA
>Mature_328_residues
MRQSNPGHTAEFHYAFSGGPAMTNAASPESQQLDAGRRSTLISAVVNVVLSLAQVTIGLAAHSQALVSDGIHSLSDLVSD
FVVLIAGSQSRKGPDRDHPYGHQRYETAASLILGMLLLAVGGGMLWAATRKFAEPSSIASVHAVALWVAMAALVAKELLF
RYMLRVAKRLRSSMLAANAWHARSDAASSLVALVGIAGNLLGYPILDPVAALVVGLMVIRMGGQFAWTAINDLMDRAVDD
EEVARIGETVGATPGVAGFHALRTRKMGDMILVDVHLEVEASLSIVEGHEIATAVENNLMTRHRVLGVMTHVDPVAPSGP
RVGRPRHA

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=254, Percent_Identity=27.9527559055118, Blast_Score=107, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI115533508, Length=293, Percent_Identity=24.9146757679181, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI115533506, Length=293, Percent_Identity=24.9146757679181, Blast_Score=69, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6325032, Length=234, Percent_Identity=30.7692307692308, Blast_Score=120, Evalue=4e-28,
Organism=Saccharomyces cerevisiae, GI6323831, Length=252, Percent_Identity=32.1428571428571, Blast_Score=111, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6323899, Length=124, Percent_Identity=32.258064516129, Blast_Score=63, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 34764; Mature: 34764

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQSNPGHTAEFHYAFSGGPAMTNAASPESQQLDAGRRSTLISAVVNVVLSLAQVTIGLA
CCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
AHSQALVSDGIHSLSDLVSDFVVLIAGSQSRKGPDRDHPYGHQRYETAASLILGMLLLAV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
GGGMLWAATRKFAEPSSIASVHAVALWVAMAALVAKELLFRYMLRVAKRLRSSMLAANAW
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HARSDAASSLVALVGIAGNLLGYPILDPVAALVVGLMVIRMGGQFAWTAINDLMDRAVDD
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCH
EEVARIGETVGATPGVAGFHALRTRKMGDMILVDVHLEVEASLSIVEGHEIATAVENNLM
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEEEEEECCEEEECCHHHHHHHHHHHH
TRHRVLGVMTHVDPVAPSGPRVGRPRHA
HHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRQSNPGHTAEFHYAFSGGPAMTNAASPESQQLDAGRRSTLISAVVNVVLSLAQVTIGLA
CCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
AHSQALVSDGIHSLSDLVSDFVVLIAGSQSRKGPDRDHPYGHQRYETAASLILGMLLLAV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
GGGMLWAATRKFAEPSSIASVHAVALWVAMAALVAKELLFRYMLRVAKRLRSSMLAANAW
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HARSDAASSLVALVGIAGNLLGYPILDPVAALVVGLMVIRMGGQFAWTAINDLMDRAVDD
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCH
EEVARIGETVGATPGVAGFHALRTRKMGDMILVDVHLEVEASLSIVEGHEIATAVENNLM
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEEEEEECCEEEECCHHHHHHHHHHHH
TRHRVLGVMTHVDPVAPSGPRVGRPRHA
HHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]