| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024345
Identifier: 238024345
GI number: 238024345
Start: 1153633
End: 1154154
Strand: Reverse
Name: 238024345
Synonym: bglu_2g09330
Alternate gene names: NA
Gene position: 1154154-1153633 (Counterclockwise)
Preceding gene: 238024348
Following gene: 238024344
Centisome position: 40.82
GC content: 62.64
Gene sequence:
>522_bases ATGGGCAAGCCGATCATCGACGACGAACTGTGGAGCTTGGTCGAACCATTACTGCCGCCACCCAAGCCGCGGCGCAAGAA GAACCCAGGCCGCTTGCCTGTTTCGAATCGCACCGCGCTGAGCGGCATCCTGTTCGTTCTCGAGACGAAACTGCGCCGGC GCGACCTGCCCGCCGAGATGGGCTGCGCTTCGGGCCTGACATGCTGGCGACGGCTGCGCGATTGGCAGACTGCGGGTGTA TGGGATCGCCTGCACGGGTTGTGGCTCGCGAAGCTGCGAGCAGTAGACCAAATCGACTTCTCGCGAGCCGCTGTCGATTC ATCATCGATTCGCGCCATTGGAGCGGGACAAAAACTGGGCCAAAACCTACCGATCGAGCGTGCCCCGGTTCCAAGCACCA CATCGTCACCGGCGTCAACGGCACGCCGCTCGCCGCTCGCCGCGATCCTGACCCGCGCGAATGTCAACGACGCCACGGGT ATTGTCAGGTTGTTGTGCGAAGGCTTGTGTAGTAGGGCATGA
Upstream 100 bases:
>100_bases GGTGTTTTTCTTCGAGACAGTTTCAAAAAGGCTCTGTGGGGCTGTTAACTTTCGCGGCTACCTATTACCCTCAGGCATCG GAGCAACCGAGATCGAGGAG
Downstream 100 bases:
>100_bases AGAAATCGACCGATGCCGTCCAGCCGTGCGTTGATTCGCCGATCTCGTTCAAAGGCTACCGCTTCCCACCTGACGTGATC AGCTACGCGGTGTGGCTGAA
Product: Insertion element IS402
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MGKPIIDDELWSLVEPLLPPPKPRRKKNPGRLPVSNRTALSGILFVLETKLRRRDLPAEMGCASGLTCWRRLRDWQTAGV WDRLHGLWLAKLRAVDQIDFSRAAVDSSSIRAIGAGQKLGQNLPIERAPVPSTTSSPASTARRSPLAAILTRANVNDATG IVRLLCEGLCSRA
Sequences:
>Translated_173_residues MGKPIIDDELWSLVEPLLPPPKPRRKKNPGRLPVSNRTALSGILFVLETKLRRRDLPAEMGCASGLTCWRRLRDWQTAGV WDRLHGLWLAKLRAVDQIDFSRAAVDSSSIRAIGAGQKLGQNLPIERAPVPSTTSSPASTARRSPLAAILTRANVNDATG IVRLLCEGLCSRA >Mature_172_residues GKPIIDDELWSLVEPLLPPPKPRRKKNPGRLPVSNRTALSGILFVLETKLRRRDLPAEMGCASGLTCWRRLRDWQTAGVW DRLHGLWLAKLRAVDQIDFSRAAVDSSSIRAIGAGQKLGQNLPIERAPVPSTTSSPASTARRSPLAAILTRANVNDATGI VRLLCEGLCSRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 6 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18936; Mature: 18805
Theoretical pI: Translated: 11.39; Mature: 11.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKPIIDDELWSLVEPLLPPPKPRRKKNPGRLPVSNRTALSGILFVLETKLRRRDLPAEM CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH GCASGLTCWRRLRDWQTAGVWDRLHGLWLAKLRAVDQIDFSRAAVDSSSIRAIGAGQKLG HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHC QNLPIERAPVPSTTSSPASTARRSPLAAILTRANVNDATGIVRLLCEGLCSRA CCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure GKPIIDDELWSLVEPLLPPPKPRRKKNPGRLPVSNRTALSGILFVLETKLRRRDLPAEM CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH GCASGLTCWRRLRDWQTAGVWDRLHGLWLAKLRAVDQIDFSRAAVDSSSIRAIGAGQKLG HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHC QNLPIERAPVPSTTSSPASTARRSPLAAILTRANVNDATGIVRLLCEGLCSRA CCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1650732 [H]