| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is (phzF1 [H]
Identifier: 238024339
GI number: 238024339
Start: 1147505
End: 1148713
Strand: Direct
Name: (phzF1 [H]
Synonym: bglu_2g09270
Alternate gene names: 238024339
Gene position: 1147505-1148713 (Clockwise)
Preceding gene: 238024338
Following gene: 238024340
Centisome position: 40.59
GC content: 67.08
Gene sequence:
>1209_bases ATGATTGTCGACATCGTTTGGTGGAACCTCGACGGTTCCGGACAGAGCATCGAATCGCTGAAGGCGCGTGTGGACGACAG CACCCTCGCGCGCTGGTCGAACGTGCCGGGCTTGCGCGAGAAGCATTGGATCGCCGACGAAGACAGGAATCGTTGGGGCG CGATCATGCTCTGGGACGGCGAGCGTCCGCCCGCGCATCTACTGCCGCCGAACGACGCGCAGACGCTGATCGGCTTGCCG GTTGCCGAGCGGCTGCGTTTTTCGGTGCAGGCAAGCGCCGCGAGCGGTGAGATCGCGGCGCGCATGCGCGCGCTCGAACC GGCGGCATCGCACGCGAATACACACGCGGCGGCGCCGATCCATGCTTCGCATCCCATCGACTACATCGTCGTTGATGCCT TCACGCGCACGCCGCTCGAAGGCAACCCGGTTGCCGTCTTCCTGGTCGACGTTCCGCTGCCGGCGGAGCGCATGCAGCGG ATCGCCCGCGAAATGAATCTGTCGGAAGTGGTGTTCGTGATGCCGCCGAAGCAGGGTGGCGACGTGCACGTGCGCATCTT TACGCCGGTCAACGAGTTGCCGTTCGCGGGCCATCCGCTGCTGGGCACGGCCGTGGCCCTCAGGCACGTCAAGGCGCAGG ATCGCTTCGTGTTCGAGACGGGCATGGGGCTCGTGCCGTTCGAAGTGCGATCCGATGCGCCCGGCGAGGCTTACGTCACC ATGCAGCAGCCGATCCCGGCGTGGACGCGCTTTGATCGCGCCGGGCGTCTGCTCGAAGCGCTCGGCGTCGAAGCGTCCGT GTTGCCCGTGGAGGCCTATCGAAACGGACCGCGTCACGTGTTCGTCACGTTGCCCGACGCCTCCGCACTTTCCGACGTGC ATCCGGACCATCGCGCGTTGGCTGAGTTCGAGGATATGTCGGCCATGTGCCTAGCACCGGCGGGCGACCACTGGCGCTGC CGGATGTTCTCGCCGGCCTACGGCGTCGTCGAGGATGCGGCGACGGGCTCCGCCGCCGGCCCCATCGCCATTCACCTTGC CCGCCACGGACTGATTTCGTGGGGCGAGCCGCTGCATCTTCTCCAAGGCGTCGAGATCAAGCGCCCCTCGCACATGCATG CGCGGGTGAGCGGCTCGGAGCACCACATCGAGGCGGTCGAGGTCAGCGGTCACGGTGTCGTCGTCGCGCGCGGCCGCCTG GGCGTCTAG
Upstream 100 bases:
>100_bases GAAGCCATCACACACGCGATACGCCGCGAAAAACGCATGACATCGGTGACGGCCTGACGATTCTTCACGCTTTTATAGAA CCCTACAGGACACGCGTTTC
Downstream 100 bases:
>100_bases CGTCGCCCCCGCCTTTTGCCATCAAGAAAACACTGCCATGAACACCAGTCGATTCGAAAGCCTCACGGGACGCGTCGATG TCCTGTTCCCCGAATATGAC
Product: phenazine biosynthesis PhzC/PhzF protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MIVDIVWWNLDGSGQSIESLKARVDDSTLARWSNVPGLREKHWIADEDRNRWGAIMLWDGERPPAHLLPPNDAQTLIGLP VAERLRFSVQASAASGEIAARMRALEPAASHANTHAAAPIHASHPIDYIVVDAFTRTPLEGNPVAVFLVDVPLPAERMQR IAREMNLSEVVFVMPPKQGGDVHVRIFTPVNELPFAGHPLLGTAVALRHVKAQDRFVFETGMGLVPFEVRSDAPGEAYVT MQQPIPAWTRFDRAGRLLEALGVEASVLPVEAYRNGPRHVFVTLPDASALSDVHPDHRALAEFEDMSAMCLAPAGDHWRC RMFSPAYGVVEDAATGSAAGPIAIHLARHGLISWGEPLHLLQGVEIKRPSHMHARVSGSEHHIEAVEVSGHGVVVARGRL GV
Sequences:
>Translated_402_residues MIVDIVWWNLDGSGQSIESLKARVDDSTLARWSNVPGLREKHWIADEDRNRWGAIMLWDGERPPAHLLPPNDAQTLIGLP VAERLRFSVQASAASGEIAARMRALEPAASHANTHAAAPIHASHPIDYIVVDAFTRTPLEGNPVAVFLVDVPLPAERMQR IAREMNLSEVVFVMPPKQGGDVHVRIFTPVNELPFAGHPLLGTAVALRHVKAQDRFVFETGMGLVPFEVRSDAPGEAYVT MQQPIPAWTRFDRAGRLLEALGVEASVLPVEAYRNGPRHVFVTLPDASALSDVHPDHRALAEFEDMSAMCLAPAGDHWRC RMFSPAYGVVEDAATGSAAGPIAIHLARHGLISWGEPLHLLQGVEIKRPSHMHARVSGSEHHIEAVEVSGHGVVVARGRL GV >Mature_402_residues MIVDIVWWNLDGSGQSIESLKARVDDSTLARWSNVPGLREKHWIADEDRNRWGAIMLWDGERPPAHLLPPNDAQTLIGLP VAERLRFSVQASAASGEIAARMRALEPAASHANTHAAAPIHASHPIDYIVVDAFTRTPLEGNPVAVFLVDVPLPAERMQR IAREMNLSEVVFVMPPKQGGDVHVRIFTPVNELPFAGHPLLGTAVALRHVKAQDRFVFETGMGLVPFEVRSDAPGEAYVT MQQPIPAWTRFDRAGRLLEALGVEASVLPVEAYRNGPRHVFVTLPDASALSDVHPDHRALAEFEDMSAMCLAPAGDHWRC RMFSPAYGVVEDAATGSAAGPIAIHLARHGLISWGEPLHLLQGVEIKRPSHMHARVSGSEHHIEAVEVSGHGVVVARGRL GV
Specific function: Isomerase that catalyzes the condensation of two molecules of trans-2,3-dihydro-3-hydroxyanthranilic acid (DHHA) into the phenazine ring system. The final product is not yet known [H]
COG id: COG0384
COG function: function code R; Predicted epimerase, PhzC/PhzF homolog
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phzF family [H]
Homologues:
Organism=Escherichia coli, GI1787737, Length=289, Percent_Identity=27.681660899654, Blast_Score=85, Evalue=8e-18, Organism=Saccharomyces cerevisiae, GI6321818, Length=291, Percent_Identity=26.4604810996564, Blast_Score=97, Evalue=5e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003719 [H]
Pfam domain/function: PF02567 PhzC-PhzF [H]
EC number: NA
Molecular weight: Translated: 43842; Mature: 43842
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVDIVWWNLDGSGQSIESLKARVDDSTLARWSNVPGLREKHWIADEDRNRWGAIMLWDG CEEEEEEEECCCCCCHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECC ERPPAHLLPPNDAQTLIGLPVAERLRFSVQASAASGEIAARMRALEPAASHANTHAAAPI CCCCCCCCCCCCCCEEEECCHHHHHEEEEEECCCCCHHHHHHHHHCHHHHCCCCCCCCCE HASHPIDYIVVDAFTRTPLEGNPVAVFLVDVPLPAERMQRIAREMNLSEVVFVMPPKQGG ECCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCC DVHVRIFTPVNELPFAGHPLLGTAVALRHVKAQDRFVFETGMGLVPFEVRSDAPGEAYVT CEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCCCCEEEE MQQPIPAWTRFDRAGRLLEALGVEASVLPVEAYRNGPRHVFVTLPDASALSDVHPDHRAL ECCCCCHHHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCEEEEECCCCHHHHHCCCCHHHH AEFEDMSAMCLAPAGDHWRCRMFSPAYGVVEDAATGSAAGPIAIHLARHGLISWGEPLHL HHHHCCCEEEEECCCCCEEEEEECCCCCCHHCCCCCCCCCCEEEEEECCCCCCCCCHHHH LQGVEIKRPSHMHARVSGSEHHIEAVEVSGHGVVVARGRLGV HCCCEECCCCCEEEEECCCCCEEEEEEECCCEEEEECCCCCC >Mature Secondary Structure MIVDIVWWNLDGSGQSIESLKARVDDSTLARWSNVPGLREKHWIADEDRNRWGAIMLWDG CEEEEEEEECCCCCCHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECC ERPPAHLLPPNDAQTLIGLPVAERLRFSVQASAASGEIAARMRALEPAASHANTHAAAPI CCCCCCCCCCCCCCEEEECCHHHHHEEEEEECCCCCHHHHHHHHHCHHHHCCCCCCCCCE HASHPIDYIVVDAFTRTPLEGNPVAVFLVDVPLPAERMQRIAREMNLSEVVFVMPPKQGG ECCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCC DVHVRIFTPVNELPFAGHPLLGTAVALRHVKAQDRFVFETGMGLVPFEVRSDAPGEAYVT CEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCCCCEEEE MQQPIPAWTRFDRAGRLLEALGVEASVLPVEAYRNGPRHVFVTLPDASALSDVHPDHRAL ECCCCCHHHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCEEEEECCCCHHHHHCCCCHHHH AEFEDMSAMCLAPAGDHWRCRMFSPAYGVVEDAATGSAAGPIAIHLARHGLISWGEPLHL HHHHCCCEEEEECCCCCEEEEEECCCCCCHHCCCCCCCCCCEEEEEECCCCCCCCCHHHH LQGVEIKRPSHMHARVSGSEHHIEAVEVSGHGVVVARGRLGV HCCCEECCCCCEEEEECCCCCEEEEEEECCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]