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The map label for this gene is yodF [H]

Identifier: 238024331

GI number: 238024331

Start: 1138653

End: 1140146

Strand: Reverse

Name: yodF [H]

Synonym: bglu_2g09190

Alternate gene names: 238024331

Gene position: 1140146-1138653 (Counterclockwise)

Preceding gene: 238024332

Following gene: 238024330

Centisome position: 40.33

GC content: 68.07

Gene sequence:

>1494_bases
ATGAACGGCACCATCGCAATCGAACCGGTGGCACTGACCATCTTCGTGGCCTTCTTCGTGCTGGTCACGGTGATCGGCTT
CTTCGCGGCGCGCTGGAAGCGCGGCGACCTCACGCAGCTGCATGAGTGGGGGCTGGGCGGGCGCCAGTTCGGCGTCGTGA
TCTCGTGGTTCCTGGTGGGCGGCGACTTCTACACGGCCTACACCGTGATCGCGGTGCCGGCGCTGGTGTACGCGGTGGGC
GGCTACGGCTTCTTCGCGCTGCCGTACACGATCATCGTCTATCCGTTCGTGTACGCGGTGATGCCGCGGCTCTGGAAGAT
CGCCCACGCGAAAGGCCACATCACGGCGGCCGACTACGTGCATGGCGAATTCGGCGGCAAGTGGCTGCCCGCCGCGGTCG
CGCTCACCGGCATCGTCGCGACGATGCCCTACATCGCGCTGCAACTGGTGGGCATGCAGGTGGTGATCAAGGGGCTCGGC
GTGACGGGCGAGCTGCCGCTCGTGATCGCGTTCCTGATCCTCGCGCTCTACACCTACACGAGCGGCCTGCGCGCGCCGGC
GATGATCGCGTTCGTGAAGGACATCATGATCTACATCGTGGTGATCGCGGCCGTCTGCCTGATTCCGGTGAAGCTCGGCG
GCTATGCCCACGTGTTCCAGGCGGCCGACAGCTACTTCGCCGCCAAGGGCGGCGCGACCGGCATCCTGCTCAAGCCGACC
CAGTTCACGGCCTACGCGACGCTGGCGCTCGGCTCGGCGCTGGCCGGGTTCATGTATCCGCACACCATGACGGCGGTGCT
CTCGTCGGCCTCGGCCAACACGGTGCGCAAGAACGCGATCTTCCTGCCGATCTACACGCTGCTGCTCGGCCTGATCGCGC
TGCTCGGCTACATGGCGATCGCCGCCGGGGTGCACGTGAGCTCGCCGAGCGACGTGGTGCCGACGCTGTTCCGCACGCTG
TTCCCGTCGTGGTTCGTCGGTTTCGCCGCGGCCGCGATCGCGATCAGCGCGCTGGTGCCGGCCGCCATCATGTCGATCGG
CGCCGCGAACCTGTTCACGCGCAATCTGTGGCGCCCGCTGGTGGCGCCGAACCAGTCGTCGGCGGGCGAGGCATCCACGG
CGAAGATCGTCTCGCTGGTGGTGAAGTTCGGCGCGCTGGTGTTCATCGTCGTGCTGCCCACCCAGTACGCGATCGACCTG
CAGCTGCTGGGCGGAGCCTGGATCCTGCAGATCCTGCCGGCCGTGGTGCTGTCGCTGTACACGCGCCGCCTGAGCGCGAC
GGGCCTGCTGGCCGGCTGGTTCGTCGGAATCGTGGTGGGCACCGGCCTCGCCACCTCGACCGGGCTCAAGCCGGTGTACA
CGCTGCATGCCGGCGCCGCGTCCTACACGCTCTACATCGGCCTGATCGCGCTCGTGCTCAACATCGCGACGAGCTTCGTC
GTCTCGGCGCTGACGCCCGCGAGCCGCTCGCAGGCAGGCCGCGCCGCGGCCTGA

Upstream 100 bases:

>100_bases
GCGAGCCAAGCTTCGGCGGCCTGCCGATGTTCTACTGGTACCAGCTGCTGTGGGTGCCGATCACCTCGGTGCTGCTCTAT
CTGGTCTATCGGGGGGAGAA

Downstream 100 bases:

>100_bases
CGCCGGCGCCGGGCCGGCGGCCTTGCCGGCCCGGCGGGCTCGGCTTGCCGCGTTGCCGGCGGTCGCGCCGGCCCGGCTCG
CCGCGTCACTGCCATCGGCA

Product: Na+ solute symporter

Products: Na (I) [Cytoplasm]; pantothenate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 497; Mature: 497

Protein sequence:

>497_residues
MNGTIAIEPVALTIFVAFFVLVTVIGFFAARWKRGDLTQLHEWGLGGRQFGVVISWFLVGGDFYTAYTVIAVPALVYAVG
GYGFFALPYTIIVYPFVYAVMPRLWKIAHAKGHITAADYVHGEFGGKWLPAAVALTGIVATMPYIALQLVGMQVVIKGLG
VTGELPLVIAFLILALYTYTSGLRAPAMIAFVKDIMIYIVVIAAVCLIPVKLGGYAHVFQAADSYFAAKGGATGILLKPT
QFTAYATLALGSALAGFMYPHTMTAVLSSASANTVRKNAIFLPIYTLLLGLIALLGYMAIAAGVHVSSPSDVVPTLFRTL
FPSWFVGFAAAAIAISALVPAAIMSIGAANLFTRNLWRPLVAPNQSSAGEASTAKIVSLVVKFGALVFIVVLPTQYAIDL
QLLGGAWILQILPAVVLSLYTRRLSATGLLAGWFVGIVVGTGLATSTGLKPVYTLHAGAASYTLYIGLIALVLNIATSFV
VSALTPASRSQAGRAAA

Sequences:

>Translated_497_residues
MNGTIAIEPVALTIFVAFFVLVTVIGFFAARWKRGDLTQLHEWGLGGRQFGVVISWFLVGGDFYTAYTVIAVPALVYAVG
GYGFFALPYTIIVYPFVYAVMPRLWKIAHAKGHITAADYVHGEFGGKWLPAAVALTGIVATMPYIALQLVGMQVVIKGLG
VTGELPLVIAFLILALYTYTSGLRAPAMIAFVKDIMIYIVVIAAVCLIPVKLGGYAHVFQAADSYFAAKGGATGILLKPT
QFTAYATLALGSALAGFMYPHTMTAVLSSASANTVRKNAIFLPIYTLLLGLIALLGYMAIAAGVHVSSPSDVVPTLFRTL
FPSWFVGFAAAAIAISALVPAAIMSIGAANLFTRNLWRPLVAPNQSSAGEASTAKIVSLVVKFGALVFIVVLPTQYAIDL
QLLGGAWILQILPAVVLSLYTRRLSATGLLAGWFVGIVVGTGLATSTGLKPVYTLHAGAASYTLYIGLIALVLNIATSFV
VSALTPASRSQAGRAAA
>Mature_497_residues
MNGTIAIEPVALTIFVAFFVLVTVIGFFAARWKRGDLTQLHEWGLGGRQFGVVISWFLVGGDFYTAYTVIAVPALVYAVG
GYGFFALPYTIIVYPFVYAVMPRLWKIAHAKGHITAADYVHGEFGGKWLPAAVALTGIVATMPYIALQLVGMQVVIKGLG
VTGELPLVIAFLILALYTYTSGLRAPAMIAFVKDIMIYIVVIAAVCLIPVKLGGYAHVFQAADSYFAAKGGATGILLKPT
QFTAYATLALGSALAGFMYPHTMTAVLSSASANTVRKNAIFLPIYTLLLGLIALLGYMAIAAGVHVSSPSDVVPTLFRTL
FPSWFVGFAAAAIAISALVPAAIMSIGAANLFTRNLWRPLVAPNQSSAGEASTAKIVSLVVKFGALVFIVVLPTQYAIDL
QLLGGAWILQILPAVVLSLYTRRLSATGLLAGWFVGIVVGTGLATSTGLKPVYTLHAGAASYTLYIGLIALVLNIATSFV
VSALTPASRSQAGRAAA

Specific function: Catalyzes The Sodium-Dependent Uptake Of Extracellular Pantothenate. [C]

COG id: COG0591

COG function: function code ER; Na+/proline symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 52295; Mature: 52295

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCCCCHHCCCCCCCC
>Mature Secondary Structure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HHHCCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; pantothenate [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + pantothenate [Periplasm] = Na (I) [Cytoplasm] + pantothenate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]