| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is cfa [H]
Identifier: 238024324
GI number: 238024324
Start: 1131076
End: 1132290
Strand: Direct
Name: cfa [H]
Synonym: bglu_2g09120
Alternate gene names: 238024324
Gene position: 1131076-1132290 (Clockwise)
Preceding gene: 238024323
Following gene: 238024325
Centisome position: 40.01
GC content: 69.88
Gene sequence:
>1215_bases ATGACGCTGAATCTGCTGTTCTCCGCATCGCAACCGTCCGTTCCCCTCGCGGCCCGGCTGTTCATGGCGCTGCTGCGGCG GATCGAGCACGGCCATCTGATCCTGCTCACGCCCGACGGCGCGCAGTACGTGTTCGGCGATCCGCACCGGGTGCCGGCCG CGACGCTGCGGATTCATGACTGGCGCGCCTGCCGCCGGATCCTGCGGGCCGGCGACATCGGCTTTGCCGAGGCGTATCGC GCCGGCTGGGTCGACACGCCCGATCCGGTCGCGCTGCTGAGCCTCGCGATCCAGAACGAACCGGTGGCCTCGCGTCCCGT CACGGGCGGGCGCCTTTCGCGGGCCTGGTACCGGCTGCGCCACCTGCTGCGCAAGAACACGCGCACCGGCAGCCGGCGCA ACATTCACGCGCATTACGACCTCGGCAACCGTTTCTACGGGCTGTGGCTGGACGACACCTGGACCTATTCCGCCGCCTGC TTCGACGGCGACCCGCACCGTCCGCTGGCCGCCGCGCAGGCCGCGAAGTATCAGCGCATCATCGACACGCTGGGCCTGCG GCCCGGCATGCGCGTGCTCGAGATCGGCTGCGGCTGGGGCGGCTTCGCGGAACATGCCGCGCGGCAGGGCATCCAGGTGC ATGCGCTGACGATCTCGCAGGCGCAGCACGCGTGGGCGCTCGAGCGGATTGCGCGGGCGGGGCTGGCGGATCGGGTGACG ATCGAATTGCGCGACTACCGCGACGTGGACGGCCGCTACGACGCCGTGGTGTCGATCGAAATGTTCGAGGCCGTCGGCGA GGCGTTCTGGCCGACCTATTTCGAGGTCGTCGGGCAGCGCCTGAAGGCCGGCGCGCGCGCGCTGATTCAGACCATCACCA TCCTCGAATCGCAATTCGAGGCCTACCGGACCTCGAGCGACTTCATCCGCGAGTTCATCTTTCCGGGCGGCATGCTGCCG AGCCCCTCGCGCTTCGTGGGTGCGGCGCGCCGGGCGGGCCTGAGCGCCGAGCCGGTGTGGGCCTTCGGGCTCGACTACGC GCGCACGCTGAACGCGTGGCGCGCGGCGTTCGAGGCGAAGCTCGACGCGGTGCGCGCGCAAGGTTTCGACGAGACCTTCG TGCGCACCTGGCGGCTCTATCTGGCCTATTGCGAAGCGGGCTTCGCCCAGCGGCGCACGGACGTGATGCACTTCGTGCTC TCGAGCGGAGGCTGA
Upstream 100 bases:
>100_bases ACGGCAAGACGCCGCCCGCGCTACGGCTTCCGGCCGCGCCTGCCGCGTCCCCGGCGCCGCAAGCCGGCCCGTCCCCGAGA TCCGATCACGAGGTCCGTCC
Downstream 100 bases:
>100_bases CATGGCGCTGCGGCTCGCCCTGCTTGCTGCGGCGCTGCTTGCCGCCGCGCCGCTTGCCGCCGCGCCGCCCGCGGGCGCGG CGAACTGCGTCGACGACGTG
Product: cyclopropane-fatty-acyl-phospholipid synthase
Products: NA
Alternate protein names: CFA synthase; Cyclopropane fatty acid synthase [H]
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MTLNLLFSASQPSVPLAARLFMALLRRIEHGHLILLTPDGAQYVFGDPHRVPAATLRIHDWRACRRILRAGDIGFAEAYR AGWVDTPDPVALLSLAIQNEPVASRPVTGGRLSRAWYRLRHLLRKNTRTGSRRNIHAHYDLGNRFYGLWLDDTWTYSAAC FDGDPHRPLAAAQAAKYQRIIDTLGLRPGMRVLEIGCGWGGFAEHAARQGIQVHALTISQAQHAWALERIARAGLADRVT IELRDYRDVDGRYDAVVSIEMFEAVGEAFWPTYFEVVGQRLKAGARALIQTITILESQFEAYRTSSDFIREFIFPGGMLP SPSRFVGAARRAGLSAEPVWAFGLDYARTLNAWRAAFEAKLDAVRAQGFDETFVRTWRLYLAYCEAGFAQRRTDVMHFVL SSGG
Sequences:
>Translated_404_residues MTLNLLFSASQPSVPLAARLFMALLRRIEHGHLILLTPDGAQYVFGDPHRVPAATLRIHDWRACRRILRAGDIGFAEAYR AGWVDTPDPVALLSLAIQNEPVASRPVTGGRLSRAWYRLRHLLRKNTRTGSRRNIHAHYDLGNRFYGLWLDDTWTYSAAC FDGDPHRPLAAAQAAKYQRIIDTLGLRPGMRVLEIGCGWGGFAEHAARQGIQVHALTISQAQHAWALERIARAGLADRVT IELRDYRDVDGRYDAVVSIEMFEAVGEAFWPTYFEVVGQRLKAGARALIQTITILESQFEAYRTSSDFIREFIFPGGMLP SPSRFVGAARRAGLSAEPVWAFGLDYARTLNAWRAAFEAKLDAVRAQGFDETFVRTWRLYLAYCEAGFAQRRTDVMHFVL SSGG >Mature_403_residues TLNLLFSASQPSVPLAARLFMALLRRIEHGHLILLTPDGAQYVFGDPHRVPAATLRIHDWRACRRILRAGDIGFAEAYRA GWVDTPDPVALLSLAIQNEPVASRPVTGGRLSRAWYRLRHLLRKNTRTGSRRNIHAHYDLGNRFYGLWLDDTWTYSAACF DGDPHRPLAAAQAAKYQRIIDTLGLRPGMRVLEIGCGWGGFAEHAARQGIQVHALTISQAQHAWALERIARAGLADRVTI ELRDYRDVDGRYDAVVSIEMFEAVGEAFWPTYFEVVGQRLKAGARALIQTITILESQFEAYRTSSDFIREFIFPGGMLPS PSRFVGAARRAGLSAEPVWAFGLDYARTLNAWRAAFEAKLDAVRAQGFDETFVRTWRLYLAYCEAGFAQRRTDVMHFVLS SGG
Specific function: Transfers a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge [H]
COG id: COG2230
COG function: function code M; Cyclopropane fatty acid synthase and related methyltransferases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CFA/CMAS family [H]
Homologues:
Organism=Escherichia coli, GI1787951, Length=360, Percent_Identity=33.8888888888889, Blast_Score=159, Evalue=3e-40, Organism=Caenorhabditis elegans, GI133904226, Length=442, Percent_Identity=33.2579185520362, Blast_Score=214, Evalue=7e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003333 [H]
Pfam domain/function: PF02353 CMAS [H]
EC number: =2.1.1.79 [H]
Molecular weight: Translated: 45350; Mature: 45219
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLNLLFSASQPSVPLAARLFMALLRRIEHGHLILLTPDGAQYVFGDPHRVPAATLRIHD CEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCEEECCCCCCCCEEEEEEHH WRACRRILRAGDIGFAEAYRAGWVDTPDPVALLSLAIQNEPVASRPVTGGRLSRAWYRLR HHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH HLLRKNTRTGSRRNIHAHYDLGNRFYGLWLDDTWTYSAACFDGDPHRPLAAAQAAKYQRI HHHHHCCCCCCCCEEEEEEECCCEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHH IDTLGLRPGMRVLEIGCGWGGFAEHAARQGIQVHALTISQAQHAWALERIARAGLADRVT HHHHCCCCCCEEEEEECCCCHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHCCCCCEEE IELRDYRDVDGRYDAVVSIEMFEAVGEAFWPTYFEVVGQRLKAGARALIQTITILESQFE EEEECCCCCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYRTSSDFIREFIFPGGMLPSPSRFVGAARRAGLSAEPVWAFGLDYARTLNAWRAAFEAK HHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHH LDAVRAQGFDETFVRTWRLYLAYCEAGFAQRRTDVMHFVLSSGG HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TLNLLFSASQPSVPLAARLFMALLRRIEHGHLILLTPDGAQYVFGDPHRVPAATLRIHD EEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCEEECCCCCCCCEEEEEEHH WRACRRILRAGDIGFAEAYRAGWVDTPDPVALLSLAIQNEPVASRPVTGGRLSRAWYRLR HHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH HLLRKNTRTGSRRNIHAHYDLGNRFYGLWLDDTWTYSAACFDGDPHRPLAAAQAAKYQRI HHHHHCCCCCCCCEEEEEEECCCEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHH IDTLGLRPGMRVLEIGCGWGGFAEHAARQGIQVHALTISQAQHAWALERIARAGLADRVT HHHHCCCCCCEEEEEECCCCHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHCCCCCEEE IELRDYRDVDGRYDAVVSIEMFEAVGEAFWPTYFEVVGQRLKAGARALIQTITILESQFE EEEECCCCCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYRTSSDFIREFIFPGGMLPSPSRFVGAARRAGLSAEPVWAFGLDYARTLNAWRAAFEAK HHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHH LDAVRAQGFDETFVRTWRLYLAYCEAGFAQRRTDVMHFVLSSGG HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]