| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024319
Identifier: 238024319
GI number: 238024319
Start: 1125749
End: 1126663
Strand: Reverse
Name: 238024319
Synonym: bglu_2g09070
Alternate gene names: NA
Gene position: 1126663-1125749 (Counterclockwise)
Preceding gene: 238024328
Following gene: 238024318
Centisome position: 39.85
GC content: 78.69
Gene sequence:
>915_bases ATGCCGCCTTCCCCGCCGCGCACGCTTTCCGCTGCGCCCGCCCTCGTCCGCCTGCTGGCCAGCCTCGGCGGCACCGAGCG GCCGCTCCAGGCCCAGGCCGCCCAGCCGCCGCTCGCCGACCGGCTCAGCCAGTGGCTGAGCTGGACCGACGCGGTCACGC TGGCGTCGGTGCTCGGCGCGCCGGCCCCGGCCGCGGCCGGCGGCGCGCGCATGCGCGACGACGAGGCGGCCCAGCGCTGC CGGACACTGCGCGCCGCACTGTCGGCGGCGATCGCCGCCGACCCCGTGCTCGCGCCCGCGCGGCCGGCACCGCGCGGCGC GCCGGCCGGGGCCCGGCACCCGCACCGGCCGGCGCCGGAACCCCGCGCCACGGACGCCGATTTCGCGGTCTATCGCCAGA GCTACCTCGCCCTGCAACAGCTGATGGACAGCGATATCGGCGACCTGCGCACCTTCCTGCGCGCGCGGCTGGCCGCCAGC TCGCCGGCACAGGCCCGGCTCGCGGTGCTCGACGCCGCGCTGGAGCGCTCGCTCGCGGCGCGCGAGCGCAGCCTGTTCGG CGCCGTGCCGGGCCGGCTCGCGGCGCGCTTCGAGCAGCTGCGCCGCGCGGCGCTGGCCGCCGAGGCGGACCACGCCGCCC AGGCCGGCGATCGCGCCACCCCAGCCGACCCAGCCGACCCAGCCGACCCAGCCGACCCAGCCGACCCAGTCGACCCGGCC GACCCGGCCGACCCGGCCGGCCAGGCTGCGGTCCCGGCCGGCGCAGACGCCGGCGCTGCGCACCGCGGTGACGCAGACGC GCCGCTCGCCTGGTTCGACACCTTCCGCAAGGATCTGCAGAGCGTCCTGTTTGCGGAACTGGAGGTTCGGTTCCAACCGG TGGAGGGGCTGCTGTCGGCCCTTCACGCCCGCTAA
Upstream 100 bases:
>100_bases CCGGGCGTCGCGACCGCCTCGCGACGGCGCGCGCTGCGGCAAAACCGCAAGCTCACGCGCGCCGACGTGTAAACTGCTGC CTTTTTTCGTTTCCCGCCGC
Downstream 100 bases:
>100_bases CGCAAACCTTATGTCCCGACTTCGTATCGATCTCCTCGTGTTCCTCGCCGGCCTCGCCGTGGTGTGCTGGATCGGCGCCG GCTTTTTTTCCACCAATCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MPPSPPRTLSAAPALVRLLASLGGTERPLQAQAAQPPLADRLSQWLSWTDAVTLASVLGAPAPAAAGGARMRDDEAAQRC RTLRAALSAAIAADPVLAPARPAPRGAPAGARHPHRPAPEPRATDADFAVYRQSYLALQQLMDSDIGDLRTFLRARLAAS SPAQARLAVLDAALERSLAARERSLFGAVPGRLAARFEQLRRAALAAEADHAAQAGDRATPADPADPADPADPADPVDPA DPADPAGQAAVPAGADAGAAHRGDADAPLAWFDTFRKDLQSVLFAELEVRFQPVEGLLSALHAR
Sequences:
>Translated_304_residues MPPSPPRTLSAAPALVRLLASLGGTERPLQAQAAQPPLADRLSQWLSWTDAVTLASVLGAPAPAAAGGARMRDDEAAQRC RTLRAALSAAIAADPVLAPARPAPRGAPAGARHPHRPAPEPRATDADFAVYRQSYLALQQLMDSDIGDLRTFLRARLAAS SPAQARLAVLDAALERSLAARERSLFGAVPGRLAARFEQLRRAALAAEADHAAQAGDRATPADPADPADPADPADPVDPA DPADPAGQAAVPAGADAGAAHRGDADAPLAWFDTFRKDLQSVLFAELEVRFQPVEGLLSALHAR >Mature_303_residues PPSPPRTLSAAPALVRLLASLGGTERPLQAQAAQPPLADRLSQWLSWTDAVTLASVLGAPAPAAAGGARMRDDEAAQRCR TLRAALSAAIAADPVLAPARPAPRGAPAGARHPHRPAPEPRATDADFAVYRQSYLALQQLMDSDIGDLRTFLRARLAASS PAQARLAVLDAALERSLAARERSLFGAVPGRLAARFEQLRRAALAAEADHAAQAGDRATPADPADPADPADPADPVDPAD PADPAGQAAVPAGADAGAAHRGDADAPLAWFDTFRKDLQSVLFAELEVRFQPVEGLLSALHAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31565; Mature: 31433
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPSPPRTLSAAPALVRLLASLGGTERPLQAQAAQPPLADRLSQWLSWTDAVTLASVLGA CCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC PAPAAAGGARMRDDEAAQRCRTLRAALSAAIAADPVLAPARPAPRGAPAGARHPHRPAPE CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC PRATDADFAVYRQSYLALQQLMDSDIGDLRTFLRARLAASSPAQARLAVLDAALERSLAA CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RERSLFGAVPGRLAARFEQLRRAALAAEADHAAQAGDRATPADPADPADPADPADPVDPA HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC DPADPAGQAAVPAGADAGAAHRGDADAPLAWFDTFRKDLQSVLFAELEVRFQPVEGLLSA CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHAR HHCC >Mature Secondary Structure PPSPPRTLSAAPALVRLLASLGGTERPLQAQAAQPPLADRLSQWLSWTDAVTLASVLGA CCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC PAPAAAGGARMRDDEAAQRCRTLRAALSAAIAADPVLAPARPAPRGAPAGARHPHRPAPE CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC PRATDADFAVYRQSYLALQQLMDSDIGDLRTFLRARLAASSPAQARLAVLDAALERSLAA CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RERSLFGAVPGRLAARFEQLRRAALAAEADHAAQAGDRATPADPADPADPADPADPVDPA HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC DPADPAGQAAVPAGADAGAAHRGDADAPLAWFDTFRKDLQSVLFAELEVRFQPVEGLLSA CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHAR HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA