| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is flbA [H]
Identifier: 238024314
GI number: 238024314
Start: 1118638
End: 1119954
Strand: Direct
Name: flbA [H]
Synonym: bglu_2g09020
Alternate gene names: 238024314
Gene position: 1118638-1119954 (Clockwise)
Preceding gene: 238024313
Following gene: 238024320
Centisome position: 39.57
GC content: 74.26
Gene sequence:
>1317_bases ATGTCCGTTCCGCCTGCCGATCCCGATCCGGCCCAGCTGCATTTCGACCGCGCCCGGTTGCTGGTGCGCGCGGATCGCTA CGCCGAAGCCGAGCTCGAATATCGCCGCGTGCTGGACCTGCTGCCGAACGCGGCCGCGGCGCACAGCAATCTCGGCAACG TGCTGGAAGTGCTGGGCCGCCTGCCGGAAGCCGAGACCCACGTGCGCCTGGCCGCGATGCTCGATCCGGGCCTGCCCGAG GCGCACTACAACCTCGGCAGCATCACCCGCCAGTCCGGCCGCCTCGACGAAGCCGAGGCCGCCTACCGGCGCGCGCTCGC GCTGCGTCCCGACTATCCGGACGCGCAGTTCGGCCTGGCCACGCTGCTGCTGGCCGCTGGCCGCTACGAGGAAGGCTGGC GGCGCTACGAATCGCGCTACGCGCACCCGCGCTTCGTGCATGCCGAGACGGCGCGGCGGCTGGCCTGCCCGCGCTGGCTG GGCGAGCCGCTCGCGGGGCGCGCCGTGCTGGTGTGGCAGGAGGACGGCCTCGGCGACATGATCCAGTTCGCCCGTTATCT GCCGATGCTGAAGGCGGCCGGCGCGCGGCAGGTGACGGTGGCCTGCATGCGCGCGCTGCACCGCCTGCTCGCCGGCATGG ACGGAGTCGACGCCGTGCTCGATCACGACGCCGCGCAGGCCGGGGCGGCGCGTTACGATTGCTGGACGAGCCTGATGAGC GCGCCCGCGCACTTCGGCACCAGCGTCGATACGATCCCCGCGCCGCTGGCGCCGCGCGTGGACGCCGCCAGCCTCGCGCG CTGGCGGGCGCCGCTCGCGGGGCTGGCTGCCGGCCGGAAGGTCGGCCTCGTCTGGAAGGGCAATCCGCACCATCACAACG ACGCCAACCGCTCGCTGCCGGCGCTCGACGCGCTCGCGCCGCTGTGGGCCGTGCCCGGCATCGATTTCATCAGCCTGCAG AAAGGCGCGGGCGAGCAGGAGGCCGAGCGGCCGCCCGCCGGCCAGCCGCTGCTGCCGCTCGGCGCAAGGGTGGCCGACCT GGCCGACAGCGCGGCCGTGATCGCGCAGCTCGATCTGCTGATCGGCGTCGATACGGCCGTCGTGCATCTGGCCGCCTCGC TCGGCGTGCCGTGCTGGGTGCTGCTGCCCGCGCGCGACCTGGACTGGCGCTGGATGCAGGCGCGCGAGGATTCGCCGTGG TATCCGGGCTGCGTGCGCCTGTTCCGGCAGTGGGGCGACGAAGCTTGGGCGCGCGTCGTGGCGCGGCTCGCGCGGGCGCT GCAGGCGTGGGCGAAGGCGCCGGCGGCGCGCCGCTGA
Upstream 100 bases:
>100_bases GGCTCGCGCGGGGCGCGGCCAGCGGCCCGCACGTCACGCCGCCGCAGCGGTCCGGCTTGCGGTAAGGTGTGCGCTTCGCA ACACGCCGCCGCCCGCCCCG
Downstream 100 bases:
>100_bases GGCGCGAGGCCGGCGGCGGCCTTGCCGTGGCGCGCCGCCGCCCGCGGCGCGGCCGAGCCGTGCCGGGCTTCGCCGCCGCG GGTATGGCGGGGGTGGCGGC
Product: TPR domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MSVPPADPDPAQLHFDRARLLVRADRYAEAELEYRRVLDLLPNAAAAHSNLGNVLEVLGRLPEAETHVRLAAMLDPGLPE AHYNLGSITRQSGRLDEAEAAYRRALALRPDYPDAQFGLATLLLAAGRYEEGWRRYESRYAHPRFVHAETARRLACPRWL GEPLAGRAVLVWQEDGLGDMIQFARYLPMLKAAGARQVTVACMRALHRLLAGMDGVDAVLDHDAAQAGAARYDCWTSLMS APAHFGTSVDTIPAPLAPRVDAASLARWRAPLAGLAAGRKVGLVWKGNPHHHNDANRSLPALDALAPLWAVPGIDFISLQ KGAGEQEAERPPAGQPLLPLGARVADLADSAAVIAQLDLLIGVDTAVVHLAASLGVPCWVLLPARDLDWRWMQAREDSPW YPGCVRLFRQWGDEAWARVVARLARALQAWAKAPAARR
Sequences:
>Translated_438_residues MSVPPADPDPAQLHFDRARLLVRADRYAEAELEYRRVLDLLPNAAAAHSNLGNVLEVLGRLPEAETHVRLAAMLDPGLPE AHYNLGSITRQSGRLDEAEAAYRRALALRPDYPDAQFGLATLLLAAGRYEEGWRRYESRYAHPRFVHAETARRLACPRWL GEPLAGRAVLVWQEDGLGDMIQFARYLPMLKAAGARQVTVACMRALHRLLAGMDGVDAVLDHDAAQAGAARYDCWTSLMS APAHFGTSVDTIPAPLAPRVDAASLARWRAPLAGLAAGRKVGLVWKGNPHHHNDANRSLPALDALAPLWAVPGIDFISLQ KGAGEQEAERPPAGQPLLPLGARVADLADSAAVIAQLDLLIGVDTAVVHLAASLGVPCWVLLPARDLDWRWMQAREDSPW YPGCVRLFRQWGDEAWARVVARLARALQAWAKAPAARR >Mature_437_residues SVPPADPDPAQLHFDRARLLVRADRYAEAELEYRRVLDLLPNAAAAHSNLGNVLEVLGRLPEAETHVRLAAMLDPGLPEA HYNLGSITRQSGRLDEAEAAYRRALALRPDYPDAQFGLATLLLAAGRYEEGWRRYESRYAHPRFVHAETARRLACPRWLG EPLAGRAVLVWQEDGLGDMIQFARYLPMLKAAGARQVTVACMRALHRLLAGMDGVDAVLDHDAAQAGAARYDCWTSLMSA PAHFGTSVDTIPAPLAPRVDAASLARWRAPLAGLAAGRKVGLVWKGNPHHHNDANRSLPALDALAPLWAVPGIDFISLQK GAGEQEAERPPAGQPLLPLGARVADLADSAAVIAQLDLLIGVDTAVVHLAASLGVPCWVLLPARDLDWRWMQAREDSPWY PGCVRLFRQWGDEAWARVVARLARALQAWAKAPAARR
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 4 TPR repeats [H]
Homologues:
Organism=Homo sapiens, GI32307150, Length=132, Percent_Identity=34.8484848484849, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI32307148, Length=132, Percent_Identity=34.8484848484849, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI115532690, Length=113, Percent_Identity=35.3982300884956, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI115532692, Length=113, Percent_Identity=35.3982300884956, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24647123, Length=130, Percent_Identity=33.8461538461538, Blast_Score=83, Evalue=4e-16, Organism=Drosophila melanogaster, GI17647755, Length=116, Percent_Identity=37.9310344827586, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24585827, Length=116, Percent_Identity=37.9310344827586, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24585829, Length=116, Percent_Identity=37.9310344827586, Blast_Score=78, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47845; Mature: 47714
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVPPADPDPAQLHFDRARLLVRADRYAEAELEYRRVLDLLPNAAAAHSNLGNVLEVLGR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHC LPEAETHVRLAAMLDPGLPEAHYNLGSITRQSGRLDEAEAAYRRALALRPDYPDAQFGLA CCCCHHHEEEHHHHCCCCCHHHCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHH TLLLAAGRYEEGWRRYESRYAHPRFVHAETARRLACPRWLGEPLAGRAVLVWQEDGLGDM HHHHHCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHCHHHHCCCCCCCEEEEECCCCCHHH IQFARYLPMLKAAGARQVTVACMRALHRLLAGMDGVDAVLDHDAAQAGAARYDCWTSLMS HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHCCHHHHHHHHHHH APAHFGTSVDTIPAPLAPRVDAASLARWRAPLAGLAAGRKVGLVWKGNPHHHNDANRSLP CHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHCCCEEEEEECCCCCCCCCCCCCCC ALDALAPLWAVPGIDFISLQKGAGEQEAERPPAGQPLLPLGARVADLADSAAVIAQLDLL HHHHHHHHHHCCCCCEEEECCCCCCCHHCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHH IGVDTAVVHLAASLGVPCWVLLPARDLDWRWMQAREDSPWYPGCVRLFRQWGDEAWARVV HHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHHH ARLARALQAWAKAPAARR HHHHHHHHHHHCCCCCCC >Mature Secondary Structure SVPPADPDPAQLHFDRARLLVRADRYAEAELEYRRVLDLLPNAAAAHSNLGNVLEVLGR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHC LPEAETHVRLAAMLDPGLPEAHYNLGSITRQSGRLDEAEAAYRRALALRPDYPDAQFGLA CCCCHHHEEEHHHHCCCCCHHHCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHH TLLLAAGRYEEGWRRYESRYAHPRFVHAETARRLACPRWLGEPLAGRAVLVWQEDGLGDM HHHHHCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHCHHHHCCCCCCCEEEEECCCCCHHH IQFARYLPMLKAAGARQVTVACMRALHRLLAGMDGVDAVLDHDAAQAGAARYDCWTSLMS HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHCCHHHHHHHHHHH APAHFGTSVDTIPAPLAPRVDAASLARWRAPLAGLAAGRKVGLVWKGNPHHHNDANRSLP CHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHCCCEEEEEECCCCCCCCCCCCCCC ALDALAPLWAVPGIDFISLQKGAGEQEAERPPAGQPLLPLGARVADLADSAAVIAQLDLL HHHHHHHHHHCCCCCEEEECCCCCCCHHCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHH IGVDTAVVHLAASLGVPCWVLLPARDLDWRWMQAREDSPWYPGCVRLFRQWGDEAWARVV HHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHHH ARLARALQAWAKAPAARR HHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748431; 11259647; 1699845 [H]