| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is yjjL [H]
Identifier: 238024302
GI number: 238024302
Start: 1075830
End: 1077164
Strand: Reverse
Name: yjjL [H]
Synonym: bglu_2g08890
Alternate gene names: 238024302
Gene position: 1077164-1075830 (Counterclockwise)
Preceding gene: 238024303
Following gene: 238024301
Centisome position: 38.1
GC content: 69.21
Gene sequence:
>1335_bases ATGGAGACGACCAGCATGAAACCAAGCCTCACGCCCGAGCAGACCCCACCCCGCGTGCGCCGCGCCCAGATCGTGGCCCT CACGCTGCTGATGGTGAGCGGCATCGTCAACTACCTGGACCGCGGCACGCTCGCGGTCGCCAATCCGCTGATCCGCAACG ATCTCGGCCTCTCGCTCGGCGAAATGGGGCTGCTGCTGTCGGCCTTCTCGTGGAGCTACGCCCTGTTCCAACTGCCGGTC GGCGGTCTCGTCGATCGCATCGGGCCGCGCCGGCTGCTCGGCATCGGCCTGATCGTCTGGTCGCTCGCGCAGGCCGCGGG CGGCATGGTCTCGACCTTCGGCTGGTTCATCGTCGCGCGCATCGTGCTCGGCATCGGCGAGTCGCCGCAGTTTCCGTCCG CCGCGCGCGTGGTGAGCAACTGGTTTCCGCTGCGCTCGCGCGGCAAGCCGACCGGGATCTTCAATGCCGCCTCGCCGCTC GGCACCGCGCTCGCCCCGCTCTGCCTGTCGCTGCTCGTCGCCGAATTCCACTGGCGCTGGGCCTTCATCGTCACCGGCGC GCTCGGCCTCGTCGTCGCGGTGATCTGGCTTGCCGTCTATCGCGACCCGAACCCGTCGGTGCTGACGGCCGAGGAAGCCC GTTATCTGCAGGGCGGCGCGGCCGAGACGCCGGCCGCCGAACGCCTGAGCTTCGCCGACTGGCGTGCCCTGTTCTCGAAC CTGACCACCTGGGGCATGCTGATCGGCTTCTTCGGCTCGGTCTACCTGAACTGGGTCTACCTGACCTGGCTGCCCGGCTA TCTGACGATGCAGCGCCACATGACGCTGCTCCATACCGGCATGGCCGCCTCGCTGCCCTTCTTCTGCGGCTTCCTCGGCG CGCTGGGCGCGGGCTGGTTCTCCGACCTCATCACGAAGCACAGCACCTCGCCGGTGGCGAGCCGGCGCAACGCGGTGGTG ATCGCGATGCTCGGCATGGTGGCCTTCACGGTGCCGGCCGCGCTGGTGGAAAGCAATACGGTGGCCATCGTCTGCATCTC GGTGGTGATCTTCCTGGCCAATGCCGCCTCGGCCTGCTCCTGGGCGCTCGCGACGGCCGCGGCACCGCCCAATCGCGTCG GCTCGCTCGGCGCGATCCAGAATTTCGGCGGCTTTCTCGGCGGCGCGCTGGCGCCCATCCTCACCGGCTACATCGCGCAG GCCTGGTCCTTCGTGCCGGCCCTGCTGACTGCCGCCGCGATCGCCTTCGTCGGTGCGATGAGCTACCTGTTCCTGGTGCG CAAGCCGATCGAAGGCGAGGCGCAACCCGCCAGCACGGTGCGTGCGCCGGCTTGA
Upstream 100 bases:
>100_bases AGGCCGAGGCCCGGGCGCGAACCGCGTCCGGGCCCGCCGCCCTCGCCGCCCGATAGACCCGCCTGCGCGCAGCCGCTGCC GCAGCCCCACAAGAAGACGC
Downstream 100 bases:
>100_bases GCCGCCCCTACCCCACTCCCCACACGGCAGGACATCGACATGACATCCCCCCTCTCACCGGCACGCGCGCCGCAACCGAT CGAAGGCATCGTTCCCGTCA
Product: major facilitator superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues METTSMKPSLTPEQTPPRVRRAQIVALTLLMVSGIVNYLDRGTLAVANPLIRNDLGLSLGEMGLLLSAFSWSYALFQLPV GGLVDRIGPRRLLGIGLIVWSLAQAAGGMVSTFGWFIVARIVLGIGESPQFPSAARVVSNWFPLRSRGKPTGIFNAASPL GTALAPLCLSLLVAEFHWRWAFIVTGALGLVVAVIWLAVYRDPNPSVLTAEEARYLQGGAAETPAAERLSFADWRALFSN LTTWGMLIGFFGSVYLNWVYLTWLPGYLTMQRHMTLLHTGMAASLPFFCGFLGALGAGWFSDLITKHSTSPVASRRNAVV IAMLGMVAFTVPAALVESNTVAIVCISVVIFLANAASACSWALATAAAPPNRVGSLGAIQNFGGFLGGALAPILTGYIAQ AWSFVPALLTAAAIAFVGAMSYLFLVRKPIEGEAQPASTVRAPA
Sequences:
>Translated_444_residues METTSMKPSLTPEQTPPRVRRAQIVALTLLMVSGIVNYLDRGTLAVANPLIRNDLGLSLGEMGLLLSAFSWSYALFQLPV GGLVDRIGPRRLLGIGLIVWSLAQAAGGMVSTFGWFIVARIVLGIGESPQFPSAARVVSNWFPLRSRGKPTGIFNAASPL GTALAPLCLSLLVAEFHWRWAFIVTGALGLVVAVIWLAVYRDPNPSVLTAEEARYLQGGAAETPAAERLSFADWRALFSN LTTWGMLIGFFGSVYLNWVYLTWLPGYLTMQRHMTLLHTGMAASLPFFCGFLGALGAGWFSDLITKHSTSPVASRRNAVV IAMLGMVAFTVPAALVESNTVAIVCISVVIFLANAASACSWALATAAAPPNRVGSLGAIQNFGGFLGGALAPILTGYIAQ AWSFVPALLTAAAIAFVGAMSYLFLVRKPIEGEAQPASTVRAPA >Mature_444_residues METTSMKPSLTPEQTPPRVRRAQIVALTLLMVSGIVNYLDRGTLAVANPLIRNDLGLSLGEMGLLLSAFSWSYALFQLPV GGLVDRIGPRRLLGIGLIVWSLAQAAGGMVSTFGWFIVARIVLGIGESPQFPSAARVVSNWFPLRSRGKPTGIFNAASPL GTALAPLCLSLLVAEFHWRWAFIVTGALGLVVAVIWLAVYRDPNPSVLTAEEARYLQGGAAETPAAERLSFADWRALFSN LTTWGMLIGFFGSVYLNWVYLTWLPGYLTMQRHMTLLHTGMAASLPFFCGFLGALGAGWFSDLITKHSTSPVASRRNAVV IAMLGMVAFTVPAALVESNTVAIVCISVVIFLANAASACSWALATAAAPPNRVGSLGAIQNFGGFLGGALAPILTGYIAQ AWSFVPALLTAAAIAFVGAMSYLFLVRKPIEGEAQPASTVRAPA
Specific function: Responsible for the transport of L-galactonate from the periplasm across the inner membrane (Probable). Is essential for growth on L-galactonate as the sole carbon source [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]
Homologues:
Organism=Homo sapiens, GI5031955, Length=240, Percent_Identity=26.6666666666667, Blast_Score=88, Evalue=2e-17, Organism=Homo sapiens, GI6912666, Length=384, Percent_Identity=22.3958333333333, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI154800443, Length=398, Percent_Identity=23.8693467336683, Blast_Score=82, Evalue=9e-16, Organism=Homo sapiens, GI4885441, Length=386, Percent_Identity=23.8341968911917, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI9966811, Length=421, Percent_Identity=22.8028503562945, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI148743791, Length=337, Percent_Identity=22.8486646884273, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI154350196, Length=407, Percent_Identity=23.0958230958231, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI185136021, Length=472, Percent_Identity=23.9406779661017, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI9945322, Length=391, Percent_Identity=22.2506393861893, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI256219598, Length=401, Percent_Identity=22.9426433915212, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI4503847, Length=401, Percent_Identity=22.9426433915212, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI256219483, Length=401, Percent_Identity=22.9426433915212, Blast_Score=69, Evalue=7e-12, Organism=Escherichia coli, GI2367379, Length=419, Percent_Identity=41.2887828162291, Blast_Score=335, Evalue=5e-93, Organism=Escherichia coli, GI87082320, Length=415, Percent_Identity=31.566265060241, Blast_Score=242, Evalue=3e-65, Organism=Escherichia coli, GI1789515, Length=443, Percent_Identity=30.9255079006772, Blast_Score=211, Evalue=8e-56, Organism=Escherichia coli, GI1789152, Length=457, Percent_Identity=31.0722100656455, Blast_Score=198, Evalue=5e-52, Organism=Escherichia coli, GI2367193, Length=434, Percent_Identity=23.963133640553, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1788573, Length=394, Percent_Identity=24.6192893401015, Blast_Score=85, Evalue=8e-18, Organism=Escherichia coli, GI87082071, Length=422, Percent_Identity=24.4075829383886, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI87082310, Length=311, Percent_Identity=23.7942122186495, Blast_Score=66, Evalue=6e-12, Organism=Caenorhabditis elegans, GI25141341, Length=358, Percent_Identity=24.8603351955307, Blast_Score=95, Evalue=8e-20, Organism=Caenorhabditis elegans, GI25141316, Length=337, Percent_Identity=24.6290801186944, Blast_Score=92, Evalue=6e-19, Organism=Caenorhabditis elegans, GI25141318, Length=337, Percent_Identity=24.6290801186944, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI86561091, Length=291, Percent_Identity=26.4604810996564, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17535049, Length=450, Percent_Identity=24, Blast_Score=75, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17554148, Length=288, Percent_Identity=25.6944444444444, Blast_Score=75, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17557872, Length=279, Percent_Identity=25.089605734767, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17560030, Length=350, Percent_Identity=23.1428571428571, Blast_Score=72, Evalue=5e-13, Organism=Caenorhabditis elegans, GI115533556, Length=346, Percent_Identity=23.4104046242775, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI115533554, Length=346, Percent_Identity=23.4104046242775, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI193205400, Length=234, Percent_Identity=22.6495726495727, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17554962, Length=307, Percent_Identity=22.8013029315961, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17552542, Length=471, Percent_Identity=22.5053078556263, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17539092, Length=269, Percent_Identity=26.3940520446097, Blast_Score=65, Evalue=9e-11, Organism=Caenorhabditis elegans, GI17561094, Length=225, Percent_Identity=24.4444444444444, Blast_Score=65, Evalue=9e-11, Organism=Drosophila melanogaster, GI24583789, Length=393, Percent_Identity=25.6997455470738, Blast_Score=118, Evalue=8e-27, Organism=Drosophila melanogaster, GI24648416, Length=475, Percent_Identity=24.6315789473684, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI21356189, Length=475, Percent_Identity=24.6315789473684, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI24584153, Length=387, Percent_Identity=22.9974160206718, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI24654039, Length=419, Percent_Identity=27.2076372315036, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI17864456, Length=419, Percent_Identity=27.2076372315036, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI28573708, Length=392, Percent_Identity=23.469387755102, Blast_Score=92, Evalue=5e-19, Organism=Drosophila melanogaster, GI28573707, Length=392, Percent_Identity=23.469387755102, Blast_Score=92, Evalue=5e-19, Organism=Drosophila melanogaster, GI24654037, Length=186, Percent_Identity=33.3333333333333, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI24654041, Length=201, Percent_Identity=32.3383084577114, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI24654044, Length=186, Percent_Identity=33.3333333333333, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI28573299, Length=403, Percent_Identity=24.8138957816377, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI20130167, Length=361, Percent_Identity=23.5457063711911, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI24654215, Length=354, Percent_Identity=25.9887005649718, Blast_Score=86, Evalue=4e-17, Organism=Drosophila melanogaster, GI19922400, Length=353, Percent_Identity=26.0623229461756, Blast_Score=86, Evalue=4e-17, Organism=Drosophila melanogaster, GI24639764, Length=415, Percent_Identity=22.1686746987952, Blast_Score=82, Evalue=8e-16, Organism=Drosophila melanogaster, GI24580790, Length=344, Percent_Identity=22.093023255814, Blast_Score=79, Evalue=8e-15, Organism=Drosophila melanogaster, GI24655255, Length=406, Percent_Identity=23.8916256157635, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI45550460, Length=406, Percent_Identity=23.8916256157635, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI19920686, Length=434, Percent_Identity=26.036866359447, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI20129235, Length=373, Percent_Identity=26.8096514745308, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24658658, Length=441, Percent_Identity=23.3560090702948, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI24655271, Length=475, Percent_Identity=22.7368421052632, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI20130135, Length=402, Percent_Identity=22.3880597014925, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24641682, Length=389, Percent_Identity=21.8508997429306, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI24653727, Length=416, Percent_Identity=23.0769230769231, Blast_Score=69, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 47144; Mature: 47144
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METTSMKPSLTPEQTPPRVRRAQIVALTLLMVSGIVNYLDRGTLAVANPLIRNDLGLSLG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHH EMGLLLSAFSWSYALFQLPVGGLVDRIGPRRLLGIGLIVWSLAQAAGGMVSTFGWFIVAR HHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH IVLGIGESPQFPSAARVVSNWFPLRSRGKPTGIFNAASPLGTALAPLCLSLLVAEFHWRW HHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH AFIVTGALGLVVAVIWLAVYRDPNPSVLTAEEARYLQGGAAETPAAERLSFADWRALFSN HHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH LTTWGMLIGFFGSVYLNWVYLTWLPGYLTMQRHMTLLHTGMAASLPFFCGFLGALGAGWF HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SDLITKHSTSPVASRRNAVVIAMLGMVAFTVPAALVESNTVAIVCISVVIFLANAASACS HHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH WALATAAAPPNRVGSLGAIQNFGGFLGGALAPILTGYIAQAWSFVPALLTAAAIAFVGAM HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SYLFLVRKPIEGEAQPASTVRAPA HHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure METTSMKPSLTPEQTPPRVRRAQIVALTLLMVSGIVNYLDRGTLAVANPLIRNDLGLSLG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHH EMGLLLSAFSWSYALFQLPVGGLVDRIGPRRLLGIGLIVWSLAQAAGGMVSTFGWFIVAR HHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH IVLGIGESPQFPSAARVVSNWFPLRSRGKPTGIFNAASPLGTALAPLCLSLLVAEFHWRW HHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH AFIVTGALGLVVAVIWLAVYRDPNPSVLTAEEARYLQGGAAETPAAERLSFADWRALFSN HHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH LTTWGMLIGFFGSVYLNWVYLTWLPGYLTMQRHMTLLHTGMAASLPFFCGFLGALGAGWF HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SDLITKHSTSPVASRRNAVVIAMLGMVAFTVPAALVESNTVAIVCISVVIFLANAASACS HHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH WALATAAAPPNRVGSLGAIQNFGGFLGGALAPILTGYIAQAWSFVPALLTAAAIAFVGAM HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SYLFLVRKPIEGEAQPASTVRAPA HHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]