| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is ycjI [C]
Identifier: 238024279
GI number: 238024279
Start: 1046575
End: 1047600
Strand: Direct
Name: ycjI [C]
Synonym: bglu_2g08620
Alternate gene names: 238024279
Gene position: 1046575-1047600 (Clockwise)
Preceding gene: 238024276
Following gene: 238024280
Centisome position: 37.02
GC content: 70.37
Gene sequence:
>1026_bases ATGACCGACGTATCCCCGCGACTTCCGAACCCGATCCGCTGTGAAATCGATCTCGACGCCGACGGCAAGCAGGCCGGCTA CCTGCGCCTGCCGCACTCGGTGCATCGCTCCGCCTATGGCTGGCTGCCGGTGCCGATCGCCTCGATTCGCAATGGCGAGG GGCCGGTGGTGCTGGTGATGTCGGGCAATCACGGCGACGAATACGAAGGCCAGGTGCTGAGCTCGCGGCTGATGCGCGAA CTGACGCCGGAGGCGGTGCGCGGGCAGGTGATCGTGCTGCCGATGGCGAATTTTCCGGCCGCCGAGGCCGGCATGCGCAC CTCGCCGCTCGACGGCGGCAACCTGAACCGCACGTTTCCGGGCGACCCGTCCGGCACGCCCACGCAGATGATCGCCCACT ACATCGAGCACACGCTGCTCGCGCGCGCCGACTATCTGGTGGACCTGCATTCGGGCGGCAGCTCGCTGATCTACGACGGC GGCAACCTGATCGCGCTCGATCCGCGCGATGCCGACGAGGAACTCCGCGTGAAGGCGCTGCTCGGCGCGTTCGGCATGCC GCGCGCGTTCCTGCACGCGCCGAACCCCACCTATGCGTCGGCCGCCGCGCGCCGCCAGGGCGCGATCTCGATCCTCACCG AACTGGGCGGCGCCGGCATGACCGATGCGAAGCTGCTGCGCCAGGGCTGGCAGGGGCTGCTGCACTTCCTCGGCTTCATC GGCGTGGTGCACGGGCCGCTCGTGCCGGACGGCCCGCCCGCCGTCACGCGCTTCATGCGCGCGAGCGGACCGCAGCATTT CGTGTATGCCTACGAGCACGGCGTCTACGAGCCGCTCGTCGAACTCGGCGAGATCGTGCAGGCCGGGCAGCCCGCGGCGC GCATCCATTTCCCCGAGACGCCGCTGCGCGAGCCGGTGGTTCACCGCTTCGAGGCGTGCGGCGAGGTGGTGTGCCGCCGC GTGCCCGCGCAGACGCGGCGCGGCGACTGCCTGTTCCAGCTCGCCGAACCGCACGACACGCTCTGA
Upstream 100 bases:
>100_bases CGAACGGCCGGGTGGGAACGGGCGGCGAGCGCGGCGCACCCGGATTGGCGCGAATGCCGGTAAGCTCGCGGTATCGTTTT CGAGCCCGTCAACCCTGATC
Downstream 100 bases:
>100_bases CGCACGGGCTGCGCCGTTCCGCGAAGCGTGTCGGTATCGCGCCGCCGGCCGCGAGGAGGTGGCGGCAAGGCGGCAAAGCA AGGCGAGCGGGGCGGCAAAG
Product: succinylglutamate desuccinylase/aspartoacylase
Products: NA
Alternate protein names: Ectoine Utilization Protein EutE; Deacylase; Succinylglutamate Desuccinylase / Aspartoacylase Family; Succinylglutamate Desuccinylase/Aspartoacylase Family; Succinylglutamatedesuccinylase/Aspartoacylase; Succinylglutamate Desuccinylase; AstE/AspA Family Protein; N-Acetyl Diamonbutyric Acid Acylase; Succinate Dehydrogenase Subunit; Succinate Dehydrogenase Subunit Sdh
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MTDVSPRLPNPIRCEIDLDADGKQAGYLRLPHSVHRSAYGWLPVPIASIRNGEGPVVLVMSGNHGDEYEGQVLSSRLMRE LTPEAVRGQVIVLPMANFPAAEAGMRTSPLDGGNLNRTFPGDPSGTPTQMIAHYIEHTLLARADYLVDLHSGGSSLIYDG GNLIALDPRDADEELRVKALLGAFGMPRAFLHAPNPTYASAAARRQGAISILTELGGAGMTDAKLLRQGWQGLLHFLGFI GVVHGPLVPDGPPAVTRFMRASGPQHFVYAYEHGVYEPLVELGEIVQAGQPAARIHFPETPLREPVVHRFEACGEVVCRR VPAQTRRGDCLFQLAEPHDTL
Sequences:
>Translated_341_residues MTDVSPRLPNPIRCEIDLDADGKQAGYLRLPHSVHRSAYGWLPVPIASIRNGEGPVVLVMSGNHGDEYEGQVLSSRLMRE LTPEAVRGQVIVLPMANFPAAEAGMRTSPLDGGNLNRTFPGDPSGTPTQMIAHYIEHTLLARADYLVDLHSGGSSLIYDG GNLIALDPRDADEELRVKALLGAFGMPRAFLHAPNPTYASAAARRQGAISILTELGGAGMTDAKLLRQGWQGLLHFLGFI GVVHGPLVPDGPPAVTRFMRASGPQHFVYAYEHGVYEPLVELGEIVQAGQPAARIHFPETPLREPVVHRFEACGEVVCRR VPAQTRRGDCLFQLAEPHDTL >Mature_340_residues TDVSPRLPNPIRCEIDLDADGKQAGYLRLPHSVHRSAYGWLPVPIASIRNGEGPVVLVMSGNHGDEYEGQVLSSRLMREL TPEAVRGQVIVLPMANFPAAEAGMRTSPLDGGNLNRTFPGDPSGTPTQMIAHYIEHTLLARADYLVDLHSGGSSLIYDGG NLIALDPRDADEELRVKALLGAFGMPRAFLHAPNPTYASAAARRQGAISILTELGGAGMTDAKLLRQGWQGLLHFLGFIG VVHGPLVPDGPPAVTRFMRASGPQHFVYAYEHGVYEPLVELGEIVQAGQPAARIHFPETPLREPVVHRFEACGEVVCRRV PAQTRRGDCLFQLAEPHDTL
Specific function: Unknown
COG id: COG3608
COG function: function code R; Predicted deacylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36945; Mature: 36813
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDVSPRLPNPIRCEIDLDADGKQAGYLRLPHSVHRSAYGWLPVPIASIRNGEGPVVLVM CCCCCCCCCCCEEEEEEECCCCCCCCEEECCHHHHHCCCCCCCCCHHHCCCCCCCEEEEE SGNHGDEYEGQVLSSRLMRELTPEAVRGQVIVLPMANFPAAEAGMRTSPLDGGNLNRTFP ECCCCCCHHHHHHHHHHHHHCCHHHHCCCEEEEECCCCCCHHCCCCCCCCCCCCCCCCCC GDPSGTPTQMIAHYIEHTLLARADYLVDLHSGGSSLIYDGGNLIALDPRDADEELRVKAL CCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEECCCEEEECCCCCCHHHHHHHH LGAFGMPRAFLHAPNPTYASAAARRQGAISILTELGGAGMTDAKLLRQGWQGLLHFLGFI HHHCCCCHHEEECCCCCHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH GVVHGPLVPDGPPAVTRFMRASGPQHFVYAYEHGVYEPLVELGEIVQAGQPAARIHFPET HHHCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEECCCC PLREPVVHRFEACGEVVCRRVPAQTRRGDCLFQLAEPHDTL CCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCC >Mature Secondary Structure TDVSPRLPNPIRCEIDLDADGKQAGYLRLPHSVHRSAYGWLPVPIASIRNGEGPVVLVM CCCCCCCCCCEEEEEEECCCCCCCCEEECCHHHHHCCCCCCCCCHHHCCCCCCCEEEEE SGNHGDEYEGQVLSSRLMRELTPEAVRGQVIVLPMANFPAAEAGMRTSPLDGGNLNRTFP ECCCCCCHHHHHHHHHHHHHCCHHHHCCCEEEEECCCCCCHHCCCCCCCCCCCCCCCCCC GDPSGTPTQMIAHYIEHTLLARADYLVDLHSGGSSLIYDGGNLIALDPRDADEELRVKAL CCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEECCCEEEECCCCCCHHHHHHHH LGAFGMPRAFLHAPNPTYASAAARRQGAISILTELGGAGMTDAKLLRQGWQGLLHFLGFI HHHCCCCHHEEECCCCCHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH GVVHGPLVPDGPPAVTRFMRASGPQHFVYAYEHGVYEPLVELGEIVQAGQPAARIHFPET HHHCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEECCCC PLREPVVHRFEACGEVVCRRVPAQTRRGDCLFQLAEPHDTL CCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA