Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

Click here to switch to the map view.

The map label for this gene is ycjI [C]

Identifier: 238024279

GI number: 238024279

Start: 1046575

End: 1047600

Strand: Direct

Name: ycjI [C]

Synonym: bglu_2g08620

Alternate gene names: 238024279

Gene position: 1046575-1047600 (Clockwise)

Preceding gene: 238024276

Following gene: 238024280

Centisome position: 37.02

GC content: 70.37

Gene sequence:

>1026_bases
ATGACCGACGTATCCCCGCGACTTCCGAACCCGATCCGCTGTGAAATCGATCTCGACGCCGACGGCAAGCAGGCCGGCTA
CCTGCGCCTGCCGCACTCGGTGCATCGCTCCGCCTATGGCTGGCTGCCGGTGCCGATCGCCTCGATTCGCAATGGCGAGG
GGCCGGTGGTGCTGGTGATGTCGGGCAATCACGGCGACGAATACGAAGGCCAGGTGCTGAGCTCGCGGCTGATGCGCGAA
CTGACGCCGGAGGCGGTGCGCGGGCAGGTGATCGTGCTGCCGATGGCGAATTTTCCGGCCGCCGAGGCCGGCATGCGCAC
CTCGCCGCTCGACGGCGGCAACCTGAACCGCACGTTTCCGGGCGACCCGTCCGGCACGCCCACGCAGATGATCGCCCACT
ACATCGAGCACACGCTGCTCGCGCGCGCCGACTATCTGGTGGACCTGCATTCGGGCGGCAGCTCGCTGATCTACGACGGC
GGCAACCTGATCGCGCTCGATCCGCGCGATGCCGACGAGGAACTCCGCGTGAAGGCGCTGCTCGGCGCGTTCGGCATGCC
GCGCGCGTTCCTGCACGCGCCGAACCCCACCTATGCGTCGGCCGCCGCGCGCCGCCAGGGCGCGATCTCGATCCTCACCG
AACTGGGCGGCGCCGGCATGACCGATGCGAAGCTGCTGCGCCAGGGCTGGCAGGGGCTGCTGCACTTCCTCGGCTTCATC
GGCGTGGTGCACGGGCCGCTCGTGCCGGACGGCCCGCCCGCCGTCACGCGCTTCATGCGCGCGAGCGGACCGCAGCATTT
CGTGTATGCCTACGAGCACGGCGTCTACGAGCCGCTCGTCGAACTCGGCGAGATCGTGCAGGCCGGGCAGCCCGCGGCGC
GCATCCATTTCCCCGAGACGCCGCTGCGCGAGCCGGTGGTTCACCGCTTCGAGGCGTGCGGCGAGGTGGTGTGCCGCCGC
GTGCCCGCGCAGACGCGGCGCGGCGACTGCCTGTTCCAGCTCGCCGAACCGCACGACACGCTCTGA

Upstream 100 bases:

>100_bases
CGAACGGCCGGGTGGGAACGGGCGGCGAGCGCGGCGCACCCGGATTGGCGCGAATGCCGGTAAGCTCGCGGTATCGTTTT
CGAGCCCGTCAACCCTGATC

Downstream 100 bases:

>100_bases
CGCACGGGCTGCGCCGTTCCGCGAAGCGTGTCGGTATCGCGCCGCCGGCCGCGAGGAGGTGGCGGCAAGGCGGCAAAGCA
AGGCGAGCGGGGCGGCAAAG

Product: succinylglutamate desuccinylase/aspartoacylase

Products: NA

Alternate protein names: Ectoine Utilization Protein EutE; Deacylase; Succinylglutamate Desuccinylase / Aspartoacylase Family; Succinylglutamate Desuccinylase/Aspartoacylase Family; Succinylglutamatedesuccinylase/Aspartoacylase; Succinylglutamate Desuccinylase; AstE/AspA Family Protein; N-Acetyl Diamonbutyric Acid Acylase; Succinate Dehydrogenase Subunit; Succinate Dehydrogenase Subunit Sdh

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MTDVSPRLPNPIRCEIDLDADGKQAGYLRLPHSVHRSAYGWLPVPIASIRNGEGPVVLVMSGNHGDEYEGQVLSSRLMRE
LTPEAVRGQVIVLPMANFPAAEAGMRTSPLDGGNLNRTFPGDPSGTPTQMIAHYIEHTLLARADYLVDLHSGGSSLIYDG
GNLIALDPRDADEELRVKALLGAFGMPRAFLHAPNPTYASAAARRQGAISILTELGGAGMTDAKLLRQGWQGLLHFLGFI
GVVHGPLVPDGPPAVTRFMRASGPQHFVYAYEHGVYEPLVELGEIVQAGQPAARIHFPETPLREPVVHRFEACGEVVCRR
VPAQTRRGDCLFQLAEPHDTL

Sequences:

>Translated_341_residues
MTDVSPRLPNPIRCEIDLDADGKQAGYLRLPHSVHRSAYGWLPVPIASIRNGEGPVVLVMSGNHGDEYEGQVLSSRLMRE
LTPEAVRGQVIVLPMANFPAAEAGMRTSPLDGGNLNRTFPGDPSGTPTQMIAHYIEHTLLARADYLVDLHSGGSSLIYDG
GNLIALDPRDADEELRVKALLGAFGMPRAFLHAPNPTYASAAARRQGAISILTELGGAGMTDAKLLRQGWQGLLHFLGFI
GVVHGPLVPDGPPAVTRFMRASGPQHFVYAYEHGVYEPLVELGEIVQAGQPAARIHFPETPLREPVVHRFEACGEVVCRR
VPAQTRRGDCLFQLAEPHDTL
>Mature_340_residues
TDVSPRLPNPIRCEIDLDADGKQAGYLRLPHSVHRSAYGWLPVPIASIRNGEGPVVLVMSGNHGDEYEGQVLSSRLMREL
TPEAVRGQVIVLPMANFPAAEAGMRTSPLDGGNLNRTFPGDPSGTPTQMIAHYIEHTLLARADYLVDLHSGGSSLIYDGG
NLIALDPRDADEELRVKALLGAFGMPRAFLHAPNPTYASAAARRQGAISILTELGGAGMTDAKLLRQGWQGLLHFLGFIG
VVHGPLVPDGPPAVTRFMRASGPQHFVYAYEHGVYEPLVELGEIVQAGQPAARIHFPETPLREPVVHRFEACGEVVCRRV
PAQTRRGDCLFQLAEPHDTL

Specific function: Unknown

COG id: COG3608

COG function: function code R; Predicted deacylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36945; Mature: 36813

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDVSPRLPNPIRCEIDLDADGKQAGYLRLPHSVHRSAYGWLPVPIASIRNGEGPVVLVM
CCCCCCCCCCCEEEEEEECCCCCCCCEEECCHHHHHCCCCCCCCCHHHCCCCCCCEEEEE
SGNHGDEYEGQVLSSRLMRELTPEAVRGQVIVLPMANFPAAEAGMRTSPLDGGNLNRTFP
ECCCCCCHHHHHHHHHHHHHCCHHHHCCCEEEEECCCCCCHHCCCCCCCCCCCCCCCCCC
GDPSGTPTQMIAHYIEHTLLARADYLVDLHSGGSSLIYDGGNLIALDPRDADEELRVKAL
CCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEECCCEEEECCCCCCHHHHHHHH
LGAFGMPRAFLHAPNPTYASAAARRQGAISILTELGGAGMTDAKLLRQGWQGLLHFLGFI
HHHCCCCHHEEECCCCCHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
GVVHGPLVPDGPPAVTRFMRASGPQHFVYAYEHGVYEPLVELGEIVQAGQPAARIHFPET
HHHCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEECCCC
PLREPVVHRFEACGEVVCRRVPAQTRRGDCLFQLAEPHDTL
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure 
TDVSPRLPNPIRCEIDLDADGKQAGYLRLPHSVHRSAYGWLPVPIASIRNGEGPVVLVM
CCCCCCCCCCEEEEEEECCCCCCCCEEECCHHHHHCCCCCCCCCHHHCCCCCCCEEEEE
SGNHGDEYEGQVLSSRLMRELTPEAVRGQVIVLPMANFPAAEAGMRTSPLDGGNLNRTFP
ECCCCCCHHHHHHHHHHHHHCCHHHHCCCEEEEECCCCCCHHCCCCCCCCCCCCCCCCCC
GDPSGTPTQMIAHYIEHTLLARADYLVDLHSGGSSLIYDGGNLIALDPRDADEELRVKAL
CCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEECCCEEEECCCCCCHHHHHHHH
LGAFGMPRAFLHAPNPTYASAAARRQGAISILTELGGAGMTDAKLLRQGWQGLLHFLGFI
HHHCCCCHHEEECCCCCHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
GVVHGPLVPDGPPAVTRFMRASGPQHFVYAYEHGVYEPLVELGEIVQAGQPAARIHFPET
HHHCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEECCCC
PLREPVVHRFEACGEVVCRRVPAQTRRGDCLFQLAEPHDTL
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA