| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024230
Identifier: 238024230
GI number: 238024230
Start: 986893
End: 989082
Strand: Direct
Name: 238024230
Synonym: bglu_2g08110
Alternate gene names: NA
Gene position: 986893-989082 (Clockwise)
Preceding gene: 238024226
Following gene: 238024231
Centisome position: 34.91
GC content: 64.57
Gene sequence:
>2190_bases ATGTCGGTGGTCGAGCAGGAGAAGGCCTACCTGTATCAGAACGCGATCGACTATGCGAAGCAGAACAACCTGCAACTGGG GCAGGCGCTGTCGCAGACGCAGGTCAACCAGCTTACGCAGCCGATGCTGTGGTACGTCGAGCAGACCGTGCCCGACCCGT CGTGCACGGCCACCGGCACGGGCGTGTGCCCGACGATCACGGCCCTGATGCCGCAGGTGTATCTGCCGCAAGGCACGGCG GCGATGACTGCCGGCGGCAACATCACCGGCGGCAACGTCGCGCTGAACTTCAACACCGATGGCAACGGCAGCATCCTGAA CACCGGCAGCATCAGCGCGTCGGGCACGCTCGCCGTGAACACGCAGACGCTGACCAACCAGGCCAATCAGGTCAACGTCG GCCAGATCTGGCAGAAGGTGGACGGCGGCTACCTCGACACCACTGGCACGACGGTCCAGCCGGGCGGATTCATGAGCGCC GCGAACATGGAACTGAACGTGCAGAGGCTGAACCAGATCGGCGGCGCACTGCAGCAGCTCAATCCGGACGGCGGTGTCGA TCAGGCGGGGACGCAGGCGCTGCTGGCGCAGTTGCAGTCGACGCTTGGCGGGAACTTCACGCAGAAGTCGGTGAGCGACG ACCTGCATCAGGATTTCGTGAAGGAAGGCGGGGCGTTCGGACTCGACCAGCTCGGCATGCTGGTGGTGGCGGTGGCCTCG TCGCTCGCGACATACGGCGCCGCGAGCGCCGCGATCGGGACGGCGCTGGGCGCAGCAGGCGGCACGTTCGCCACCGCCAG CACGGCTGCCGGGGTCAGCGCGGGGCTCGGCAACGCCGTGCTATCCGCGGCGATCGCTGGCGTGGTGTCGAGCAGCGCGA GCCAGTTGGTCGGTACGGGCAAGCTGGATCTTGGCAGCGCGTTCGAGGCGGGCGCAGTGGCCGCGATCACGGCCGGGCTG ATGAACGGCATTACCTACAGCAATCAGTCGGGGCTCGGGTTTACGACTTCGCCGATCGCGAGCGGATCTGGCGTGCAAAG CCTTGGGAGCCTGGCCGGCGTGCAGCCGGTGGTGGGTACCTCGGTGAATCAGGCTGCCGGTTCGACGGCCACGCTCATCG AAGAGCGCGGGCTGGCCATGCTGGCCAGTGGCGTGATCAACGCCGGCGTGGGGACGGCGATCGAGGGCGGGAGCTTCCTC AGCGCGCTGAAGGGTTCGCTGGTCAGCGAAGTGGCGGCGGTGGGGGCCAATGCGATCGGCGATGAGGCGAATGTGAAGGG CTCGCCGATCGAGGCCGGGTCACCAGCGTATTGGCTCGCGCATGCGGCGCTGGGATGTGCCAGCTCGGCAGCGCTCGGAA CCGGGTGCGCGGGTGGGGCGATTGGCGGGGCCACGAGTGCGGTGCTGTCGCCGTGGGTGATTGGTCAAATCGATCCGAGT GGTGCGCCGCTGGATCAAGGGCAGGTTGCGGCCGTGACGGCGCTGGCGACGATGGCCGGTGGGGCAATGGCCGGACTGGC CGGTCAAAACGCAATGGCCGGGGCGACGGCGGCGCAAAATGAAGCGCTGAACAATGCGACGCAGCATGTTGGGCCGTCGA ATGGTATGCTGTCGAAGGTTTGCGCTGCTACGAATCCGGCTTGTAGCGACCAGATGATCCAGACGCTGAACAATGCGCAG GCGCAGAATGCCACAATGGCGCTGGGTAACATGAACGCTGCCGCGCCTTATGTCGCGGGTGCGCTCGGCGTATCGTTGTT TGGTCCAGAAGCGATCGCGACGGCGGTGACTGCTGGTGCATATGATTACTTTGGCGATCTTTATAGCTACAGGACGGGAT TGCAGCCGGACCAACCGAACTTCACGAAATCGTATATCGCGGGTGTGATCGGAGGGTTGGCGTATCCGTTTGCAATCGCC GACGAAGCCATTTCGGGAATGAGTAAGGTTGGGAAGATTGCGGCGAACGGTTATAACGCGGGAGTAGCTGGGGTGGGTGC ATTCGGTTCTGCGGCGGTGACACGCCAAGACAACCCAGACTTGTCCGGCGGGCTCGGAAGTGGATTGGCTGCTGTCGGGA CTTGGGCCAAGGCAACCTTGCCGGCCCCGTTTGGCAACATAGCGAATCAAACGCTTCAAGGCGCTGCCGGGCCGATCCAG AATGTTATTCAAAAGGCATTGGGGCACTAA
Upstream 100 bases:
>100_bases ATTCGCGCTTACAGAGGATCTGCTGCTGCAGCAGGCGTCGCTGCAGCAAACCGGCAAGGCTTCGTTTATCGACGGCCTCA GCACCGACAGCAAGAGCGGC
Downstream 100 bases:
>100_bases CGTTGGATGATAAAAGGCGGTCAATCTTCTGGCGCTTTGCGAAGGGCTACCTTTCGCTTATTGCCATGATTGTGTTTGTT CTAGGAGTGTCGTTGGCTAA
Product: Adhesin HecA family protein
Products: NA
Alternate protein names: Adhesin HecA; Filamentous Haemagglutinin Outer Membrane Protein; Filamentous Hemagglutinin Family Outer Membrane Protein; Adhesin; Metalloendopeptidase; Filamentous Haemagglutinin Adhesin HecA
Number of amino acids: Translated: 729; Mature: 728
Protein sequence:
>729_residues MSVVEQEKAYLYQNAIDYAKQNNLQLGQALSQTQVNQLTQPMLWYVEQTVPDPSCTATGTGVCPTITALMPQVYLPQGTA AMTAGGNITGGNVALNFNTDGNGSILNTGSISASGTLAVNTQTLTNQANQVNVGQIWQKVDGGYLDTTGTTVQPGGFMSA ANMELNVQRLNQIGGALQQLNPDGGVDQAGTQALLAQLQSTLGGNFTQKSVSDDLHQDFVKEGGAFGLDQLGMLVVAVAS SLATYGAASAAIGTALGAAGGTFATASTAAGVSAGLGNAVLSAAIAGVVSSSASQLVGTGKLDLGSAFEAGAVAAITAGL MNGITYSNQSGLGFTTSPIASGSGVQSLGSLAGVQPVVGTSVNQAAGSTATLIEERGLAMLASGVINAGVGTAIEGGSFL SALKGSLVSEVAAVGANAIGDEANVKGSPIEAGSPAYWLAHAALGCASSAALGTGCAGGAIGGATSAVLSPWVIGQIDPS GAPLDQGQVAAVTALATMAGGAMAGLAGQNAMAGATAAQNEALNNATQHVGPSNGMLSKVCAATNPACSDQMIQTLNNAQ AQNATMALGNMNAAAPYVAGALGVSLFGPEAIATAVTAGAYDYFGDLYSYRTGLQPDQPNFTKSYIAGVIGGLAYPFAIA DEAISGMSKVGKIAANGYNAGVAGVGAFGSAAVTRQDNPDLSGGLGSGLAAVGTWAKATLPAPFGNIANQTLQGAAGPIQ NVIQKALGH
Sequences:
>Translated_729_residues MSVVEQEKAYLYQNAIDYAKQNNLQLGQALSQTQVNQLTQPMLWYVEQTVPDPSCTATGTGVCPTITALMPQVYLPQGTA AMTAGGNITGGNVALNFNTDGNGSILNTGSISASGTLAVNTQTLTNQANQVNVGQIWQKVDGGYLDTTGTTVQPGGFMSA ANMELNVQRLNQIGGALQQLNPDGGVDQAGTQALLAQLQSTLGGNFTQKSVSDDLHQDFVKEGGAFGLDQLGMLVVAVAS SLATYGAASAAIGTALGAAGGTFATASTAAGVSAGLGNAVLSAAIAGVVSSSASQLVGTGKLDLGSAFEAGAVAAITAGL MNGITYSNQSGLGFTTSPIASGSGVQSLGSLAGVQPVVGTSVNQAAGSTATLIEERGLAMLASGVINAGVGTAIEGGSFL SALKGSLVSEVAAVGANAIGDEANVKGSPIEAGSPAYWLAHAALGCASSAALGTGCAGGAIGGATSAVLSPWVIGQIDPS GAPLDQGQVAAVTALATMAGGAMAGLAGQNAMAGATAAQNEALNNATQHVGPSNGMLSKVCAATNPACSDQMIQTLNNAQ AQNATMALGNMNAAAPYVAGALGVSLFGPEAIATAVTAGAYDYFGDLYSYRTGLQPDQPNFTKSYIAGVIGGLAYPFAIA DEAISGMSKVGKIAANGYNAGVAGVGAFGSAAVTRQDNPDLSGGLGSGLAAVGTWAKATLPAPFGNIANQTLQGAAGPIQ NVIQKALGH >Mature_728_residues SVVEQEKAYLYQNAIDYAKQNNLQLGQALSQTQVNQLTQPMLWYVEQTVPDPSCTATGTGVCPTITALMPQVYLPQGTAA MTAGGNITGGNVALNFNTDGNGSILNTGSISASGTLAVNTQTLTNQANQVNVGQIWQKVDGGYLDTTGTTVQPGGFMSAA NMELNVQRLNQIGGALQQLNPDGGVDQAGTQALLAQLQSTLGGNFTQKSVSDDLHQDFVKEGGAFGLDQLGMLVVAVASS LATYGAASAAIGTALGAAGGTFATASTAAGVSAGLGNAVLSAAIAGVVSSSASQLVGTGKLDLGSAFEAGAVAAITAGLM NGITYSNQSGLGFTTSPIASGSGVQSLGSLAGVQPVVGTSVNQAAGSTATLIEERGLAMLASGVINAGVGTAIEGGSFLS ALKGSLVSEVAAVGANAIGDEANVKGSPIEAGSPAYWLAHAALGCASSAALGTGCAGGAIGGATSAVLSPWVIGQIDPSG APLDQGQVAAVTALATMAGGAMAGLAGQNAMAGATAAQNEALNNATQHVGPSNGMLSKVCAATNPACSDQMIQTLNNAQA QNATMALGNMNAAAPYVAGALGVSLFGPEAIATAVTAGAYDYFGDLYSYRTGLQPDQPNFTKSYIAGVIGGLAYPFAIAD EAISGMSKVGKIAANGYNAGVAGVGAFGSAAVTRQDNPDLSGGLGSGLAAVGTWAKATLPAPFGNIANQTLQGAAGPIQN VIQKALGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71526; Mature: 71394
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVVEQEKAYLYQNAIDYAKQNNLQLGQALSQTQVNQLTQPMLWYVEQTVPDPSCTATGT CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GVCPTITALMPQVYLPQGTAAMTAGGNITGGNVALNFNTDGNGSILNTGSISASGTLAVN CHHHHHHHHCCHHCCCCCCEEEECCCCCCCCEEEEEECCCCCCCEEECCCCCCCCEEEEE TQTLTNQANQVNVGQIWQKVDGGYLDTTGTTVQPGGFMSAANMELNVQRLNQIGGALQQL CHHHHCCCCCCCHHHHHHHHCCCEECCCCCEECCCCCEEECCCEEHHHHHHHHHHHHHHC NPDGGVDQAGTQALLAQLQSTLGGNFTQKSVSDDLHQDFVKEGGAFGLDQLGMLVVAVAS CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH SLATYGAASAAIGTALGAAGGTFATASTAAGVSAGLGNAVLSAAIAGVVSSSASQLVGTG HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KLDLGSAFEAGAVAAITAGLMNGITYSNQSGLGFTTSPIASGSGVQSLGSLAGVQPVVGT CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHCC SVNQAAGSTATLIEERGLAMLASGVINAGVGTAIEGGSFLSALKGSLVSEVAAVGANAIG CCHHHCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHCC DEANVKGSPIEAGSPAYWLAHAALGCASSAALGTGCAGGAIGGATSAVLSPWVIGQIDPS CCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHCCCCCCCCCCCCHHHHHHCCCEEEEECCC GAPLDQGQVAAVTALATMAGGAMAGLAGQNAMAGATAAQNEALNNATQHVGPSNGMLSKV CCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHH CAATNPACSDQMIQTLNNAQAQNATMALGNMNAAAPYVAGALGVSLFGPEAIATAVTAGA HHCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH YDYFGDLYSYRTGLQPDQPNFTKSYIAGVIGGLAYPFAIADEAISGMSKVGKIAANGYNA HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GVAGVGAFGSAAVTRQDNPDLSGGLGSGLAAVGTWAKATLPAPFGNIANQTLQGAAGPIQ CCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHH NVIQKALGH HHHHHHHCC >Mature Secondary Structure SVVEQEKAYLYQNAIDYAKQNNLQLGQALSQTQVNQLTQPMLWYVEQTVPDPSCTATGT CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GVCPTITALMPQVYLPQGTAAMTAGGNITGGNVALNFNTDGNGSILNTGSISASGTLAVN CHHHHHHHHCCHHCCCCCCEEEECCCCCCCCEEEEEECCCCCCCEEECCCCCCCCEEEEE TQTLTNQANQVNVGQIWQKVDGGYLDTTGTTVQPGGFMSAANMELNVQRLNQIGGALQQL CHHHHCCCCCCCHHHHHHHHCCCEECCCCCEECCCCCEEECCCEEHHHHHHHHHHHHHHC NPDGGVDQAGTQALLAQLQSTLGGNFTQKSVSDDLHQDFVKEGGAFGLDQLGMLVVAVAS CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH SLATYGAASAAIGTALGAAGGTFATASTAAGVSAGLGNAVLSAAIAGVVSSSASQLVGTG HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KLDLGSAFEAGAVAAITAGLMNGITYSNQSGLGFTTSPIASGSGVQSLGSLAGVQPVVGT CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHCC SVNQAAGSTATLIEERGLAMLASGVINAGVGTAIEGGSFLSALKGSLVSEVAAVGANAIG CCHHHCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHCC DEANVKGSPIEAGSPAYWLAHAALGCASSAALGTGCAGGAIGGATSAVLSPWVIGQIDPS CCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHCCCCCCCCCCCCHHHHHHCCCEEEEECCC GAPLDQGQVAAVTALATMAGGAMAGLAGQNAMAGATAAQNEALNNATQHVGPSNGMLSKV CCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHH CAATNPACSDQMIQTLNNAQAQNATMALGNMNAAAPYVAGALGVSLFGPEAIATAVTAGA HHCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH YDYFGDLYSYRTGLQPDQPNFTKSYIAGVIGGLAYPFAIADEAISGMSKVGKIAANGYNA HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GVAGVGAFGSAAVTRQDNPDLSGGLGSGLAAVGTWAKATLPAPFGNIANQTLQGAAGPIQ CCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHH NVIQKALGH HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA