| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is insN1 [H]
Identifier: 238024197
GI number: 238024197
Start: 940523
End: 941002
Strand: Direct
Name: insN1 [H]
Synonym: bglu_2g07760
Alternate gene names: 238024197
Gene position: 940523-941002 (Clockwise)
Preceding gene: 238024196
Following gene: 238024198
Centisome position: 33.27
GC content: 58.96
Gene sequence:
>480_bases ATGAGCAAGCAACGACTTACGTTTTCCCCGGAGTTCAAACAGCAAGCCGCCTGTCTGGTGCTCGACCAGGGCGATAGCCA TCTGGAAGCAAGCCGCTCGGTCGGCGTCGGCGAGACGGTGCTGCGCCGCTGGGTGCAGCAACTTCAGATGGAGCGCCAGG GCGTCGCTCCGAAGGGCAAGGCAATCACACCGGATCAACAGCGTATTCAGGAACTCGAGGCGCGTCTCGAACGCCTCGAA CGTGAGAAGGCCATTTTAAAAAATGGCTACCGCACTCTTGATGTCGGAAGGCATCGAACGTACGAGGTCATCGATCAGAT TGGCGCAGGCGAATCGGTCGAGCTGATCTGCGCGGTATTGGACGTGCCGCGGTCCCGCCTGTATGCCCACCGAGGGCGAG CCCGACGCGTTGACACCGATCGCCCGCGCATTGCTTATAATGCTGTTCTGCCACCAAGAATCGAAAGGTGTTTCGAATGA
Upstream 100 bases:
>100_bases TCGGTTCGATTCGCGCCTTGCCGGGACGCCTCATGCTGTAGTGGCCTAATGAATCCGGACACTGATTTAGGCGAGCATGG TCGCCACGAAGAAGTGTCCG
Downstream 100 bases:
>100_bases ATGAGTAATGCCTGGATGCCATGCATCTTGACCACTCGCTGCCTCATGCGCGAGCCGCATTGCTTATTCATTTCGATTAT TCTGCTCCCGGCCTCCGCTC
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MSKQRLTFSPEFKQQAACLVLDQGDSHLEASRSVGVGETVLRRWVQQLQMERQGVAPKGKAITPDQQRIQELEARLERLE REKAILKNGYRTLDVGRHRTYEVIDQIGAGESVELICAVLDVPRSRLYAHRGRARRVDTDRPRIAYNAVLPPRIERCFE
Sequences:
>Translated_159_residues MSKQRLTFSPEFKQQAACLVLDQGDSHLEASRSVGVGETVLRRWVQQLQMERQGVAPKGKAITPDQQRIQELEARLERLE REKAILKNGYRTLDVGRHRTYEVIDQIGAGESVELICAVLDVPRSRLYAHRGRARRVDTDRPRIAYNAVLPPRIERCFE >Mature_158_residues SKQRLTFSPEFKQQAACLVLDQGDSHLEASRSVGVGETVLRRWVQQLQMERQGVAPKGKAITPDQQRIQELEARLERLER EKAILKNGYRTLDVGRHRTYEVIDQIGAGESVELICAVLDVPRSRLYAHRGRARRVDTDRPRIAYNAVLPPRIERCFE
Specific function: Involved in the transposition of the insertion sequence IS911 [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002514 [H]
Pfam domain/function: PF01527 Transposase_8 [H]
EC number: NA
Molecular weight: Translated: 18263; Mature: 18132
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKQRLTFSPEFKQQAACLVLDQGDSHLEASRSVGVGETVLRRWVQQLQMERQGVAPKGK CCCCCCCCCCCHHCCCEEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCC AITPDQQRIQELEARLERLEREKAILKNGYRTLDVGRHRTYEVIDQIGAGESVELICAVL CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHCCCCHHHHHHHHH DVPRSRLYAHRGRARRVDTDRPRIAYNAVLPPRIERCFE HCCHHHHHHHCCCCCCCCCCCCCEEECCCCCHHHHHHCC >Mature Secondary Structure SKQRLTFSPEFKQQAACLVLDQGDSHLEASRSVGVGETVLRRWVQQLQMERQGVAPKGK CCCCCCCCCCHHCCCEEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCC AITPDQQRIQELEARLERLEREKAILKNGYRTLDVGRHRTYEVIDQIGAGESVELICAVL CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHCCCCHHHHHHHHH DVPRSRLYAHRGRARRVDTDRPRIAYNAVLPPRIERCFE HCCHHHHHHHCCCCCCCCCCCCCEEECCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]