| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is glcB [H]
Identifier: 238024172
GI number: 238024172
Start: 905063
End: 907231
Strand: Reverse
Name: glcB [H]
Synonym: bglu_2g07500
Alternate gene names: 238024172
Gene position: 907231-905063 (Counterclockwise)
Preceding gene: 238024173
Following gene: 238024170
Centisome position: 32.09
GC content: 69.11
Gene sequence:
>2169_bases ATGAATTCCATGATCCAGCGTCACGGGCTCAAGATAGCCGAGAGCCTCGCGCGCTTCGTCGATACCGAGGCTCTGCCCGG CACCGGTGTCGACGGCGACGCATTCTGGTCCGGTTTCTCCGCGATCGTCCATGACCTCGCGCCGAAGAACCGCCAGCTCG TCGCCGAGCGCGAGCGCCTGCAGCACGAACTGAATCGCTGGCACCGCGACCATCCCGGCCCGGTGCGCGACCTGCGCGCC TACCGCCAGTTCCTCGAGAGCATCGGCTACATCGTGCCGGCGCCGTCGAACGTGAAGGCCAGCACCGCCAACGTGGATCG CGAGATCGCCGAGCAGGCCGGCCCGCAGCTGGTGGTGCCGCTGTCGAACCCGCGCTACGCGCTGAACGCCGCCAACGCGC GCTGGGGCAGCCTCTACGACGCGCTGTACGGCACCGATGCGATCCCCGACACGAACGGCGCCGAGCGCGGCGCGACGTAC AACCCGAAGCGCGGCGCGCGCGTGGTGGCGTTCGCGCGGCGCGTGCTCGACGAGGCCGTGCCGCTCGCGCAAGGCTCGCA TGCCGACGCCACGCGCTACGCGGTCGAGGGCGGCAAGCTGGTGGTCACGCTCGCGAACGGTAGCACGCAGCTGAAGGACC CGGCGCAATTCATCGGCCATCAGGGCGACGCGGCCGCGCCGTCGGCGGTGCTGCTCAAGCACCACGGCCTGCACCTGGAA ATCCAGATCGACGCGAACGACGCGATCGGCAAGACCGACCCGGCGCACGTGAAGGACCTGGTGCTCGAGGCGGCGGTCTC CACCATCATCGACTGCGAGGACTCGGTGGCGGCGGTGGACGCGGCCGACAAGGTCGACCTCTACCGCAACTGGCTCGGCC TGATGAACGGCGACCTCTCGGAGTCGGTCACGAAGGGCGGCAAGACCTTCACGCGCAAGCTCAATGCCGACCGCGAATAT GTCGGCGCCGACGGCGCGAGCGTCAGGCTGCATGGCCGCTCGCTGCTGTTCATCCGCAACGTCGGCCACCTGATGACGAA TCCGGCGGTGGTCGATCGCGACGGCAACGAGATTCCCGAAGGCATTCTCGACGGCGTGATGACCACGCTCTGCGCGCTGC GCGACCGCCAGAACCGGCTGAACTCGCGCACCGGCTCGATCTACATCGTCAAGCCGAAGATGCACGGCCCGGCCGAGGTG GCGTTCGCGAGCGAGCTGTTCGCGCGCGTCGAGGATCTGCTGGCGCTGCCGCGCAACACCATCAAGATGGGCATCATGGA CGAGGAGCGCCGCACCAGCGTCAACCTCGCCGCCTGCATCGCCGAGGCCGCGCCGCGCGTGGCGTTCATCAACACCGGCT TTCTCGACCGCACCGGCGACGAGATGCATAGCGCGATGGAAGCCGGCCCGATGATGCGCAAGGGCGACATGAAGTCGAGC CGCTGGATCGCCGCCTACGAGCGCAGCAACGTGCTGGTGGGCCTGGCCGCCGGGCTGCGCGGCCGCGCGCAGATCGGCAA GGGCATGTGGGCGATGCCGGACCTGATGCACGCCATGCTCGAACAGAAGATCGCGCACCCGAAGGCCGGCGCGAACACGG CCTGGGTGCCCTCGCCGACCGCCGCGACGCTGCACGCGCTGCACTATCACCAGGTCGACGTGCAGGCCGTGCAGCAGGCG CTCGAGGCCACCGACCCGGCCGCCGCGCGCGACGAGCTGCTCGACGGGCTGCTGTCGGTGCCGGTGGTGGAGAAGGCGAA CTGGAGCGACGCCGAGATCCGCGCCGAGCTGGAGAACAACGCGCAGGGCATACTCGGCTACGTGGTGCGCTGGGTCGACC AGGGCGTGGGCTGCTCGAAGGTGCCCGACATCCACGACGTCGGGCTGATGGAGGATCGCGCCACGCTGCGCATCTCGAGC CAGCATATCGCGAACTGGCTGCATCACGGCGTGGTCACGCGCGAGCTCGTCGACGAGACGCTCAGGCGGATGGCGAAGGT GGTGGACCAGCAGAACGCCGGCGATCCGCACTATCAGCCGATGGCGCCCGACTTCGACAAGTCGCTCGCGTTCCAGGCCG CCAGCGCGTTGATCTACGAAGGCCGCGCCCAGCCGAGCGGCTACACCGAGCCGCTGCTGCACCGCTTCCGCCTGCAGAAG AAGGGCTGA
Upstream 100 bases:
>100_bases TTTACGCCTGCCCCGAGGCATCCGCTTTCACTTCGCCACTTTCGCAACTCTAGGGCCGACTTCCCCCAAGGCCGGCCCCC ACCCTAAGATGGAGCAGTCG
Downstream 100 bases:
>100_bases CCGCGCACGCCGCCGCCGCGCGGCGTCTCGCCGGGCGCGGGCCCGCCGGCCCGCCCGCCGGGTGCGATGCGTTGCCCGCG CACGGCCTGCCACCCCGGTC
Product: malate synthase G
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 722; Mature: 722
Protein sequence:
>722_residues MNSMIQRHGLKIAESLARFVDTEALPGTGVDGDAFWSGFSAIVHDLAPKNRQLVAERERLQHELNRWHRDHPGPVRDLRA YRQFLESIGYIVPAPSNVKASTANVDREIAEQAGPQLVVPLSNPRYALNAANARWGSLYDALYGTDAIPDTNGAERGATY NPKRGARVVAFARRVLDEAVPLAQGSHADATRYAVEGGKLVVTLANGSTQLKDPAQFIGHQGDAAAPSAVLLKHHGLHLE IQIDANDAIGKTDPAHVKDLVLEAAVSTIIDCEDSVAAVDAADKVDLYRNWLGLMNGDLSESVTKGGKTFTRKLNADREY VGADGASVRLHGRSLLFIRNVGHLMTNPAVVDRDGNEIPEGILDGVMTTLCALRDRQNRLNSRTGSIYIVKPKMHGPAEV AFASELFARVEDLLALPRNTIKMGIMDEERRTSVNLAACIAEAAPRVAFINTGFLDRTGDEMHSAMEAGPMMRKGDMKSS RWIAAYERSNVLVGLAAGLRGRAQIGKGMWAMPDLMHAMLEQKIAHPKAGANTAWVPSPTAATLHALHYHQVDVQAVQQA LEATDPAAARDELLDGLLSVPVVEKANWSDAEIRAELENNAQGILGYVVRWVDQGVGCSKVPDIHDVGLMEDRATLRISS QHIANWLHHGVVTRELVDETLRRMAKVVDQQNAGDPHYQPMAPDFDKSLAFQAASALIYEGRAQPSGYTEPLLHRFRLQK KG
Sequences:
>Translated_722_residues MNSMIQRHGLKIAESLARFVDTEALPGTGVDGDAFWSGFSAIVHDLAPKNRQLVAERERLQHELNRWHRDHPGPVRDLRA YRQFLESIGYIVPAPSNVKASTANVDREIAEQAGPQLVVPLSNPRYALNAANARWGSLYDALYGTDAIPDTNGAERGATY NPKRGARVVAFARRVLDEAVPLAQGSHADATRYAVEGGKLVVTLANGSTQLKDPAQFIGHQGDAAAPSAVLLKHHGLHLE IQIDANDAIGKTDPAHVKDLVLEAAVSTIIDCEDSVAAVDAADKVDLYRNWLGLMNGDLSESVTKGGKTFTRKLNADREY VGADGASVRLHGRSLLFIRNVGHLMTNPAVVDRDGNEIPEGILDGVMTTLCALRDRQNRLNSRTGSIYIVKPKMHGPAEV AFASELFARVEDLLALPRNTIKMGIMDEERRTSVNLAACIAEAAPRVAFINTGFLDRTGDEMHSAMEAGPMMRKGDMKSS RWIAAYERSNVLVGLAAGLRGRAQIGKGMWAMPDLMHAMLEQKIAHPKAGANTAWVPSPTAATLHALHYHQVDVQAVQQA LEATDPAAARDELLDGLLSVPVVEKANWSDAEIRAELENNAQGILGYVVRWVDQGVGCSKVPDIHDVGLMEDRATLRISS QHIANWLHHGVVTRELVDETLRRMAKVVDQQNAGDPHYQPMAPDFDKSLAFQAASALIYEGRAQPSGYTEPLLHRFRLQK KG >Mature_722_residues MNSMIQRHGLKIAESLARFVDTEALPGTGVDGDAFWSGFSAIVHDLAPKNRQLVAERERLQHELNRWHRDHPGPVRDLRA YRQFLESIGYIVPAPSNVKASTANVDREIAEQAGPQLVVPLSNPRYALNAANARWGSLYDALYGTDAIPDTNGAERGATY NPKRGARVVAFARRVLDEAVPLAQGSHADATRYAVEGGKLVVTLANGSTQLKDPAQFIGHQGDAAAPSAVLLKHHGLHLE IQIDANDAIGKTDPAHVKDLVLEAAVSTIIDCEDSVAAVDAADKVDLYRNWLGLMNGDLSESVTKGGKTFTRKLNADREY VGADGASVRLHGRSLLFIRNVGHLMTNPAVVDRDGNEIPEGILDGVMTTLCALRDRQNRLNSRTGSIYIVKPKMHGPAEV AFASELFARVEDLLALPRNTIKMGIMDEERRTSVNLAACIAEAAPRVAFINTGFLDRTGDEMHSAMEAGPMMRKGDMKSS RWIAAYERSNVLVGLAAGLRGRAQIGKGMWAMPDLMHAMLEQKIAHPKAGANTAWVPSPTAATLHALHYHQVDVQAVQQA LEATDPAAARDELLDGLLSVPVVEKANWSDAEIRAELENNAQGILGYVVRWVDQGVGCSKVPDIHDVGLMEDRATLRISS QHIANWLHHGVVTRELVDETLRRMAKVVDQQNAGDPHYQPMAPDFDKSLAFQAASALIYEGRAQPSGYTEPLLHRFRLQK KG
Specific function: Accounts For Almost The Entire Malate-Synthesizing Activity In Cells Metabolizing Glyoxylate. [C]
COG id: COG2225
COG function: function code C; Malate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the malate synthase family. GlcB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789348, Length=722, Percent_Identity=64.6814404432133, Blast_Score=977, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011076 - InterPro: IPR001465 - InterPro: IPR006253 [H]
Pfam domain/function: PF01274 Malate_synthase [H]
EC number: =2.3.3.9 [H]
Molecular weight: Translated: 78712; Mature: 78712
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: PS00589 PTS_HPR_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSMIQRHGLKIAESLARFVDTEALPGTGVDGDAFWSGFSAIVHDLAPKNRQLVAERERL CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH QHELNRWHRDHPGPVRDLRAYRQFLESIGYIVPAPSNVKASTANVDREIAEQAGPQLVVP HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHCCCEEEEE LSNPRYALNAANARWGSLYDALYGTDAIPDTNGAERGATYNPKRGARVVAFARRVLDEAV CCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC PLAQGSHADATRYAVEGGKLVVTLANGSTQLKDPAQFIGHQGDAAAPSAVLLKHHGLHLE CCCCCCCCCHHHEEECCCEEEEEEECCCCCCCCHHHHHCCCCCCCCCHHHHHHCCCEEEE IQIDANDAIGKTDPAHVKDLVLEAAVSTIIDCEDSVAAVDAADKVDLYRNWLGLMNGDLS EEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHCCCHH ESVTKGGKTFTRKLNADREYVGADGASVRLHGRSLLFIRNVGHLMTNPAVVDRDGNEIPE HHHHCCCHHHHHHHCCCCHHCCCCCCEEEECCCEEEEEEHHHHHHCCCEEEECCCCCCHH GILDGVMTTLCALRDRQNRLNSRTGSIYIVKPKMHGPAEVAFASELFARVEDLLALPRNT HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCC IKMGIMDEERRTSVNLAACIAEAAPRVAFINTGFLDRTGDEMHSAMEAGPMMRKGDMKSS EEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCC RWIAAYERSNVLVGLAAGLRGRAQIGKGMWAMPDLMHAMLEQKIAHPKAGANTAWVPSPT CEEEEEECCCEEEEECCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC AATLHALHYHQVDVQAVQQALEATDPAAARDELLDGLLSVPVVEKANWSDAEIRAELENN HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCC AQGILGYVVRWVDQGVGCSKVPDIHDVGLMEDRATLRISSQHIANWLHHGVVTRELVDET CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHH LRRMAKVVDQQNAGDPHYQPMAPDFDKSLAFQAASALIYEGRAQPSGYTEPLLHRFRLQK HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC KG CC >Mature Secondary Structure MNSMIQRHGLKIAESLARFVDTEALPGTGVDGDAFWSGFSAIVHDLAPKNRQLVAERERL CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH QHELNRWHRDHPGPVRDLRAYRQFLESIGYIVPAPSNVKASTANVDREIAEQAGPQLVVP HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHCCCEEEEE LSNPRYALNAANARWGSLYDALYGTDAIPDTNGAERGATYNPKRGARVVAFARRVLDEAV CCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC PLAQGSHADATRYAVEGGKLVVTLANGSTQLKDPAQFIGHQGDAAAPSAVLLKHHGLHLE CCCCCCCCCHHHEEECCCEEEEEEECCCCCCCCHHHHHCCCCCCCCCHHHHHHCCCEEEE IQIDANDAIGKTDPAHVKDLVLEAAVSTIIDCEDSVAAVDAADKVDLYRNWLGLMNGDLS EEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHCCCHH ESVTKGGKTFTRKLNADREYVGADGASVRLHGRSLLFIRNVGHLMTNPAVVDRDGNEIPE HHHHCCCHHHHHHHCCCCHHCCCCCCEEEECCCEEEEEEHHHHHHCCCEEEECCCCCCHH GILDGVMTTLCALRDRQNRLNSRTGSIYIVKPKMHGPAEVAFASELFARVEDLLALPRNT HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCC IKMGIMDEERRTSVNLAACIAEAAPRVAFINTGFLDRTGDEMHSAMEAGPMMRKGDMKSS EEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCC RWIAAYERSNVLVGLAAGLRGRAQIGKGMWAMPDLMHAMLEQKIAHPKAGANTAWVPSPT CEEEEEECCCEEEEECCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC AATLHALHYHQVDVQAVQQALEATDPAAARDELLDGLLSVPVVEKANWSDAEIRAELENN HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCC AQGILGYVVRWVDQGVGCSKVPDIHDVGLMEDRATLRISSQHIANWLHHGVVTRELVDET CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHH LRRMAKVVDQQNAGDPHYQPMAPDFDKSLAFQAASALIYEGRAQPSGYTEPLLHRFRLQK HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC KG CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA