| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024167
Identifier: 238024167
GI number: 238024167
Start: 895419
End: 897269
Strand: Reverse
Name: 238024167
Synonym: bglu_2g07450
Alternate gene names: NA
Gene position: 897269-895419 (Counterclockwise)
Preceding gene: 238024168
Following gene: 238024166
Centisome position: 31.74
GC content: 68.18
Gene sequence:
>1851_bases ATGCAAGCCGCCACCGTCACGCTCAGCGACTGCTTCCGCGAGGAACTCGCCTCGCTGCGCACCGAGTCGGTCCAGTTCAG CGAGAAGCATCGCGAGCTGGCCCGCACGCTCGGCCTCAACGCGCGCGAGGCGAGCGACCCGCAGGTCGAGCTGCTGCTGC AGTCGTTCGCCTTTCTCGCGGCACGCCTGCGGCACCAGGTGGAACTGGACAAGGCGCGCCTGCCCAATACCCTGCTGTCG TTCCTCTATCCGCACCTGGAGGCGCCGATCCCGTCGATGCTGATCGCGCGCATCGACGTGAAGCCCGACGGCACCGACTA TGCCAAGGAACAACTGCTGCAGCGCGGCCGCACCGTGAATGCGCTGACCGCCAACCAGCTCGGCCAGAACGTCGAGTGCC GGTTCCAGACCTGCTACGACACCCCGCTGCTGCCGCTGCGCATCGACGCCGTGGTGCTCGAATCGGCGAGCGAATACGCG TTCGCGGGCGCCGGCTCGTCGTCGCGCTCGGTGCTGCGGGTCCGTCTCTCGGCGGCCGGCGTCGGCACCCTGCAGTCGAA GGGGCGCGGGCCGCGCCGGCTGCGCTTCTACATCGACGACGCGCAGCCCGACGCGGTGGCGCTCTACGAGATGATCGCGC TGCACCTGGAGAGCATCCACGTGCTGCCGGCCGCGCCGCTCACGCCCGGCGCGCAGCCCCTGCGGCAGCTGCCGGCCGAG GCGCTGCGCTGGCTCGGCATGGAACCCGACGAGGCGGTGCTCAGCGCCAACCCGCACACGCACCCCGGCTATCGCCTGCT GCAGGAGTATTTCGCGTTTCCGGAGAAGTTCGGCTTCTTCGAGATCGGCCGGCTCGACGAGCTCGACTTCAGCGGCGTGA GCGAGTATTTCGACCTGCTGCTGATGCTCGACATGCCGTTCGACCCCAAGCATCATTTCTCGGCCCACTCGCTGGTGCTG AACTGCGTGCCGCTCGTCAACCTCTTCACGCAGCGCATCGAGCCGATCGCGCTCGATCACAGCGAGTACGAATACCGCGT GACGGGCGACTTCACGAATCACCGCTACTGCGAGATCCATTCGATCCGCGAGCTCGAATCGATCTCGAGCGAGGGCAAGC CGCGTCCGATCGCGCCTTACTTCGCGATGGACAACTTCGCCAGCCTGGAAGGCCAGGACTATTTCTATCTGTGCCGGCGC CTGCCGGCCACCGCCGCCAACGTCGCGGGCAGCGAGATGTTCGTCTCGTTCCTCGACCAGCAGTTCAACCTCGGCCAGCT CACCGACGAGGTGGTGGGCGGCACCGCGCTCTGCACCAACCGGCGGCTGCCGGAGCGCCTGATGTCGGGCAGCGCGCTGC ACCTGGAAGGCGGCGGCCCGGTGAACCGGATCGTCGCGATGACCAAGCCGACCCAGCACCACACGCCGCCGCAGATCGGC AGCCGCCCGTGGTCGCTGGTCTCGCAGCTCGCGCTCAACCACCTCTCGCTCGACGGCGGCGCGCTCGCGCTCGCCGCGCT GAAGGACATCCTGCGGCTGCACGTCGGCCCGCATCGCGAGAGCGGCTGGAAGCAGATCGACGCGATCACCGAGCTGCGCA GCCGCAGCATCATGCGCCACGTCGGGCGCGACGGCTGGCGCGGCTTCGTGCGCGGCTCGGAGCTGACGGTGGTGATGGAG CCGATCGACATCGGCGCGGGCAGCGTGGTGCGGTTCTGCTCGGTGCTGCGCGAATTCCTGCGCGGCTACGCGAGCGTCAA TCATCTGGTCGAAGTCGCGCTCGAAACGCGTAACCTGAAGGGGAGCCCCAAGCAATGGCAAGCATCGGCCGGCACCGCTA TCGCACTGTAA
Upstream 100 bases:
>100_bases GAGGCGCTTTGCCCGTATCGCATCGCGATCTACGGCACGCTCGACCCCAGCAACGGCGTGGACGTGTTCCACTTCGAGCT GCCTTCCCACTGAGGCCCGC
Downstream 100 bases:
>100_bases GGGAGTCCATGCTCAGGCAATACGAGGACTTCAACGTGTTCCAGTTGATGCGCCTCATGCTGTCCGATACCGACAAGCGC CTGCCGATCGGGCGGCGCCT
Product: type VI secretion system protein ImpG
Products: NA
Alternate protein names: Type VI Secretion Protein Family; T6ss C; Type VI Secretion System; Type VI Secretion System Protein EvpF; Type VI Secretion System Protein; Type VI Secretion Protein VasA; Type VI Secretion System Core Protein; Protein ImpG; Cytoplasmic Protein SciC; Type VI Secretion System Protein ImpG; Protein ImpG/VasA
Number of amino acids: Translated: 616; Mature: 616
Protein sequence:
>616_residues MQAATVTLSDCFREELASLRTESVQFSEKHRELARTLGLNAREASDPQVELLLQSFAFLAARLRHQVELDKARLPNTLLS FLYPHLEAPIPSMLIARIDVKPDGTDYAKEQLLQRGRTVNALTANQLGQNVECRFQTCYDTPLLPLRIDAVVLESASEYA FAGAGSSSRSVLRVRLSAAGVGTLQSKGRGPRRLRFYIDDAQPDAVALYEMIALHLESIHVLPAAPLTPGAQPLRQLPAE ALRWLGMEPDEAVLSANPHTHPGYRLLQEYFAFPEKFGFFEIGRLDELDFSGVSEYFDLLLMLDMPFDPKHHFSAHSLVL NCVPLVNLFTQRIEPIALDHSEYEYRVTGDFTNHRYCEIHSIRELESISSEGKPRPIAPYFAMDNFASLEGQDYFYLCRR LPATAANVAGSEMFVSFLDQQFNLGQLTDEVVGGTALCTNRRLPERLMSGSALHLEGGGPVNRIVAMTKPTQHHTPPQIG SRPWSLVSQLALNHLSLDGGALALAALKDILRLHVGPHRESGWKQIDAITELRSRSIMRHVGRDGWRGFVRGSELTVVME PIDIGAGSVVRFCSVLREFLRGYASVNHLVEVALETRNLKGSPKQWQASAGTAIAL
Sequences:
>Translated_616_residues MQAATVTLSDCFREELASLRTESVQFSEKHRELARTLGLNAREASDPQVELLLQSFAFLAARLRHQVELDKARLPNTLLS FLYPHLEAPIPSMLIARIDVKPDGTDYAKEQLLQRGRTVNALTANQLGQNVECRFQTCYDTPLLPLRIDAVVLESASEYA FAGAGSSSRSVLRVRLSAAGVGTLQSKGRGPRRLRFYIDDAQPDAVALYEMIALHLESIHVLPAAPLTPGAQPLRQLPAE ALRWLGMEPDEAVLSANPHTHPGYRLLQEYFAFPEKFGFFEIGRLDELDFSGVSEYFDLLLMLDMPFDPKHHFSAHSLVL NCVPLVNLFTQRIEPIALDHSEYEYRVTGDFTNHRYCEIHSIRELESISSEGKPRPIAPYFAMDNFASLEGQDYFYLCRR LPATAANVAGSEMFVSFLDQQFNLGQLTDEVVGGTALCTNRRLPERLMSGSALHLEGGGPVNRIVAMTKPTQHHTPPQIG SRPWSLVSQLALNHLSLDGGALALAALKDILRLHVGPHRESGWKQIDAITELRSRSIMRHVGRDGWRGFVRGSELTVVME PIDIGAGSVVRFCSVLREFLRGYASVNHLVEVALETRNLKGSPKQWQASAGTAIAL >Mature_616_residues MQAATVTLSDCFREELASLRTESVQFSEKHRELARTLGLNAREASDPQVELLLQSFAFLAARLRHQVELDKARLPNTLLS FLYPHLEAPIPSMLIARIDVKPDGTDYAKEQLLQRGRTVNALTANQLGQNVECRFQTCYDTPLLPLRIDAVVLESASEYA FAGAGSSSRSVLRVRLSAAGVGTLQSKGRGPRRLRFYIDDAQPDAVALYEMIALHLESIHVLPAAPLTPGAQPLRQLPAE ALRWLGMEPDEAVLSANPHTHPGYRLLQEYFAFPEKFGFFEIGRLDELDFSGVSEYFDLLLMLDMPFDPKHHFSAHSLVL NCVPLVNLFTQRIEPIALDHSEYEYRVTGDFTNHRYCEIHSIRELESISSEGKPRPIAPYFAMDNFASLEGQDYFYLCRR LPATAANVAGSEMFVSFLDQQFNLGQLTDEVVGGTALCTNRRLPERLMSGSALHLEGGGPVNRIVAMTKPTQHHTPPQIG SRPWSLVSQLALNHLSLDGGALALAALKDILRLHVGPHRESGWKQIDAITELRSRSIMRHVGRDGWRGFVRGSELTVVME PIDIGAGSVVRFCSVLREFLRGYASVNHLVEVALETRNLKGSPKQWQASAGTAIAL
Specific function: Unknown
COG id: COG3519
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68480; Mature: 68480
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAATVTLSDCFREELASLRTESVQFSEKHRELARTLGLNAREASDPQVELLLQSFAFLA CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH ARLRHQVELDKARLPNTLLSFLYPHLEAPIPSMLIARIDVKPDGTDYAKEQLLQRGRTVN HHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHEEEEEECCCCCCHHHHHHHHHCCCCEE ALTANQLGQNVECRFQTCYDTPLLPLRIDAVVLESASEYAFAGAGSSSRSVLRVRLSAAG EEEHHHCCCCCEEEEEEECCCCCCCEEEHHHHHHCCCCCEEECCCCCCCCEEEEEEHHCC VGTLQSKGRGPRRLRFYIDDAQPDAVALYEMIALHLESIHVLPAAPLTPGAQPLRQLPAE CCCHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHH ALRWLGMEPDEAVLSANPHTHPGYRLLQEYFAFPEKFGFFEIGRLDELDFSGVSEYFDLL HHHHCCCCCCCHHCCCCCCCCHHHHHHHHHHCCHHHCCCEECCCCCCCCCCCHHHHHHHH LMLDMPFDPKHHFSAHSLVLNCVPLVNLFTQRIEPIALDHSEYEYRVTGDFTNHRYCEIH HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEECCCCCCCEEEHH SIRELESISSEGKPRPIAPYFAMDNFASLEGQDYFYLCRRLPATAANVAGSEMFVSFLDQ HHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHCCCHHHHCCHHHHHHHHHHC QFNLGQLTDEVVGGTALCTNRRLPERLMSGSALHLEGGGPVNRIVAMTKPTQHHTPPQIG CCCCHHHHHHHHCCHHEECCCCCHHHHHCCCEEEECCCCCHHHEEEECCCCCCCCCCCCC SRPWSLVSQLALNHLSLDGGALALAALKDILRLHVGPHRESGWKQIDAITELRSRSIMRH CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH VGRDGWRGFVRGSELTVVMEPIDIGAGSVVRFCSVLREFLRGYASVNHLVEVALETRNLK HCCCCCHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GSPKQWQASAGTAIAL CCCCHHHCCCCCEECC >Mature Secondary Structure MQAATVTLSDCFREELASLRTESVQFSEKHRELARTLGLNAREASDPQVELLLQSFAFLA CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH ARLRHQVELDKARLPNTLLSFLYPHLEAPIPSMLIARIDVKPDGTDYAKEQLLQRGRTVN HHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHEEEEEECCCCCCHHHHHHHHHCCCCEE ALTANQLGQNVECRFQTCYDTPLLPLRIDAVVLESASEYAFAGAGSSSRSVLRVRLSAAG EEEHHHCCCCCEEEEEEECCCCCCCEEEHHHHHHCCCCCEEECCCCCCCCEEEEEEHHCC VGTLQSKGRGPRRLRFYIDDAQPDAVALYEMIALHLESIHVLPAAPLTPGAQPLRQLPAE CCCHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHH ALRWLGMEPDEAVLSANPHTHPGYRLLQEYFAFPEKFGFFEIGRLDELDFSGVSEYFDLL HHHHCCCCCCCHHCCCCCCCCHHHHHHHHHHCCHHHCCCEECCCCCCCCCCCHHHHHHHH LMLDMPFDPKHHFSAHSLVLNCVPLVNLFTQRIEPIALDHSEYEYRVTGDFTNHRYCEIH HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEECCCCCCCEEEHH SIRELESISSEGKPRPIAPYFAMDNFASLEGQDYFYLCRRLPATAANVAGSEMFVSFLDQ HHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHCCCHHHHCCHHHHHHHHHHC QFNLGQLTDEVVGGTALCTNRRLPERLMSGSALHLEGGGPVNRIVAMTKPTQHHTPPQIG CCCCHHHHHHHHCCHHEECCCCCHHHHHCCCEEEECCCCCHHHEEEECCCCCCCCCCCCC SRPWSLVSQLALNHLSLDGGALALAALKDILRLHVGPHRESGWKQIDAITELRSRSIMRH CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH VGRDGWRGFVRGSELTVVMEPIDIGAGSVVRFCSVLREFLRGYASVNHLVEVALETRNLK HCCCCCHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GSPKQWQASAGTAIAL CCCCHHHCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA