| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is 238024128
Identifier: 238024128
GI number: 238024128
Start: 830257
End: 831198
Strand: Reverse
Name: 238024128
Synonym: bglu_2g07030
Alternate gene names: NA
Gene position: 831198-830257 (Counterclockwise)
Preceding gene: 238024129
Following gene: 238024125
Centisome position: 29.4
GC content: 71.23
Gene sequence:
>942_bases GTGGTGCCGCAAATTCGGACCTCGTTCATGAAGCCTGCCGAGCCGGCAATTTTCGACGCGCAATCGACCGCGAGGCTGCT CGACTACCGCGTGCTGATCGAGGTGCTGCGCGAGACCGTCGTCGAATACGGCGCTGGCGGGATCGTCAGCCCGGAGCGGC TGGTCGTCCCGCTGCAGGCGGGCGGCCTGATGCTGTCGATGCCGTCGAGCGCCGCGGACCTCGCCATCCACAAGCTCGTC AACGTCTGCCCCGCCAACGCGCAGCGCCGGCTTCCGACCATCCATGGCCAGGTGATCGCCTGCGATGCGCATACCGGACA GACGCTGTTCGTCCTCGACGGCCCGACCCTCACCGGGCGCCGCACGGCGGCCGTGACGGCGCTCGGCATCATGACGCTGC ACGGCAAGCCGCCGGCCGAATGCCTCCTGATCGGCACCGGCAAGCAGGCCGCCAACCACGTCGAGGCGCTCGCCGCCTTG TTCCCGCAGGCACGCATCCTGTGCCGGGGCCGCTGCCGCGCGAGCACCGAGCGCTTCGTGGCGCAGCAGCGCGGCGTGGC GCCGAACCTCGTTGCGCTAGACGGCGAAGTGCCGGCTCACACCGACGTCGTCATCGCGGCGACCACCAGCAAGACGCCGG TGTACGACGCGCCCGCCCGCGAGGGACGCCTGGTCGTCGGAGTCGGCGCCTTCACGCCCGACGCGGCCGAGATCGGCAAG GCGACGGTGGACGGCAGCTACCTCGTGGTGGACGATCCGCTCGGCGCGACACACGAGGCCGGCGACCTCATCCAGGCCCG CGTCGATTGGCACGAGGTCCACTCCCTCGCGGAGGCGCTCGAAGGCAAGCTCGATCCGCGCGCGCCGGTGTTCTTCAAGA GCGTCGGCTGTGCCGCCTGGGACCTGGCGGCCTGCCGGGTGGCGCGACGGGCGATCGGCTAG
Upstream 100 bases:
>100_bases CGGCTCGCCGGCCTTGCGGATGAGGGCGAAGATGCCGGCTGGATGCATGGTGACTGCCAAAAACCGCACGGCGTGCTTGT TGAAATCCTAGGGACCCAGG
Downstream 100 bases:
>100_bases CCGGGGGCTGAAGGTCACGCCCATTGCGCATCGGAACCGCGCTTGCCGCGCCGTCGTCAGGCGGCATACGCGCTCATGCC GCTGCCCGCCGCGGCACGAG
Product: ornithine cyclodeaminase
Products: NA
Alternate protein names: Ornithine Cyclodeaminase/Mu-Crystallin; Ornithine Cyclodeaminase/Mu-Crystallin Family Protein; Alanine Dehydrogenase; Ornithine Cyclodeaminase Mu-Crystallin; Ornithine Cyclodeaminase Family Protein; L-Alanine Dehydrogenase; Ornithine Cyclodeaminase/Mu-Crystallin Family; Ornithine Cyclodeaminase Protein; Ornithine Cyclodeaminase Mu-Crystallin-Like Protein; Mu-Crystallin
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MVPQIRTSFMKPAEPAIFDAQSTARLLDYRVLIEVLRETVVEYGAGGIVSPERLVVPLQAGGLMLSMPSSAADLAIHKLV NVCPANAQRRLPTIHGQVIACDAHTGQTLFVLDGPTLTGRRTAAVTALGIMTLHGKPPAECLLIGTGKQAANHVEALAAL FPQARILCRGRCRASTERFVAQQRGVAPNLVALDGEVPAHTDVVIAATTSKTPVYDAPAREGRLVVGVGAFTPDAAEIGK ATVDGSYLVVDDPLGATHEAGDLIQARVDWHEVHSLAEALEGKLDPRAPVFFKSVGCAAWDLAACRVARRAIG
Sequences:
>Translated_313_residues MVPQIRTSFMKPAEPAIFDAQSTARLLDYRVLIEVLRETVVEYGAGGIVSPERLVVPLQAGGLMLSMPSSAADLAIHKLV NVCPANAQRRLPTIHGQVIACDAHTGQTLFVLDGPTLTGRRTAAVTALGIMTLHGKPPAECLLIGTGKQAANHVEALAAL FPQARILCRGRCRASTERFVAQQRGVAPNLVALDGEVPAHTDVVIAATTSKTPVYDAPAREGRLVVGVGAFTPDAAEIGK ATVDGSYLVVDDPLGATHEAGDLIQARVDWHEVHSLAEALEGKLDPRAPVFFKSVGCAAWDLAACRVARRAIG >Mature_313_residues MVPQIRTSFMKPAEPAIFDAQSTARLLDYRVLIEVLRETVVEYGAGGIVSPERLVVPLQAGGLMLSMPSSAADLAIHKLV NVCPANAQRRLPTIHGQVIACDAHTGQTLFVLDGPTLTGRRTAAVTALGIMTLHGKPPAECLLIGTGKQAANHVEALAAL FPQARILCRGRCRASTERFVAQQRGVAPNLVALDGEVPAHTDVVIAATTSKTPVYDAPAREGRLVVGVGAFTPDAAEIGK ATVDGSYLVVDDPLGATHEAGDLIQARVDWHEVHSLAEALEGKLDPRAPVFFKSVGCAAWDLAACRVARRAIG
Specific function: Unknown
COG id: COG2423
COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4503065, Length=272, Percent_Identity=28.6764705882353, Blast_Score=82, Evalue=8e-16, Organism=Homo sapiens, GI62241008, Length=269, Percent_Identity=28.2527881040892, Blast_Score=76, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33020; Mature: 33020
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPQIRTSFMKPAEPAIFDAQSTARLLDYRVLIEVLRETVVEYGAGGIVSPERLVVPLQA CCCCHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC GGLMLSMPSSAADLAIHKLVNVCPANAQRRLPTIHGQVIACDAHTGQTLFVLDGPTLTGR CCEEEECCCCHHHHHHHHHHHHCCCCHHHCCCCCCCEEEEEECCCCCEEEEECCCCCCCC RTAAVTALGIMTLHGKPPAECLLIGTGKQAANHVEALAALFPQARILCRGRCRASTERFV CHHHEEEEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH AQQRGVAPNLVALDGEVPAHTDVVIAATTSKTPVYDAPAREGRLVVGVGAFTPDAAEIGK HHHCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCHHHHCC ATVDGSYLVVDDPLGATHEAGDLIQARVDWHEVHSLAEALEGKLDPRAPVFFKSVGCAAW EEECCCEEEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEHHCCCCHH DLAACRVARRAIG HHHHHHHHHHHCC >Mature Secondary Structure MVPQIRTSFMKPAEPAIFDAQSTARLLDYRVLIEVLRETVVEYGAGGIVSPERLVVPLQA CCCCHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC GGLMLSMPSSAADLAIHKLVNVCPANAQRRLPTIHGQVIACDAHTGQTLFVLDGPTLTGR CCEEEECCCCHHHHHHHHHHHHCCCCHHHCCCCCCCEEEEEECCCCCEEEEECCCCCCCC RTAAVTALGIMTLHGKPPAECLLIGTGKQAANHVEALAALFPQARILCRGRCRASTERFV CHHHEEEEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH AQQRGVAPNLVALDGEVPAHTDVVIAATTSKTPVYDAPAREGRLVVGVGAFTPDAAEIGK HHHCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCHHHHCC ATVDGSYLVVDDPLGATHEAGDLIQARVDWHEVHSLAEALEGKLDPRAPVFFKSVGCAAW EEECCCEEEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEHHCCCCHH DLAACRVARRAIG HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA